Lory012050.1
Basic Information
- Insect
- Latheticus oryzae
- Gene Symbol
- Rel
- Assembly
- GCA_030157265.1
- Location
- CM058055.1:10182087-10186079[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.8e-43 9.5e-40 136.3 0.6 1 168 67 257 67 258 0.91 2 2 0.83 2.8e+03 -2.0 0.1 86 115 466 504 460 548 0.67
Sequence Information
- Coding Sequence
- atgttgttagaaaatttaaattatccaTTTCCAGGCCAGGaAATGTCATCATAcccaaatattttaacaccACCTTCGAGCAATGAAGATTCGCCACAACCTTCGTATTTTATACCAGTTCAAgagaatattttaatattgcCACCAACGTCACCAGCGTTTGATTTGGATGGAATCAGTGAAACGACAGTGCCGTTTTTGCGAATTGTGGAACAACCTTTAGATCGGTTCCGGTTTCGCTACAAATCTGAGATGACAGGAACTCATGGGAGTTTGTGTGGACAAAGATCGGATAGACGGGGACGGCAAACTTTTCCTACAGTTGAACTTtgcaattttaacaaaaacgcAGTTATCAGATGTTCGATTTATCAAAACACACAAGAAGACCATAAACCACACGCTCATCGTTTAGTTAAAAAACAAGGAAAAGGGGAAATTGATGATCCACATGATACCACTGTTTCTCCTGAAACTGGTTACATTTGTGGgtTCCATAATATGGGCATTATTCATACAGCTAAGAAAAATCTAGTTCCTGAATTAATAAGAAAGAAAACTCAgttgaaaaaagaagaaattcaTAGAATTGAGGGTAAAGCAAGAGAACTCAAACAAAAAGAAGAGATtgagATTAAAGGATTGGCTGAAGCTGAAAGCAAATCCATTAATCTGAATGTTGTTTGTTTGCGATTTGATGCTTTCTACAAGTCGCCTGATGGTATTCTTTTACCTATCTGTCCTCCAGTATATTCGCATGCCATCAATAACTTGAAAAGTGCCTTAACAGGCGAATTAAAAATAGTCCGAATGGATCATTGTACAAGTCCTGCTAAAGGAGGACGAGAAGTTTTCATTTTAGTTGAAAGAGTGACTAAAAaaaatataaaaattcgattttatgAATTAGATGACGATGATAATGTCATTTGGGAAAATTATGGGAAATTTAGTGATTTGGATGTTCATCATCAATATGCTATTGTCTTTAAAACACCACCATATAGAGATGTTGATATTAAAAGTCCTGTTAAAGTTTATATTCAGTTGGAACGTCCGTCGGATAGTGCTAGAAGCGAACCTAAAGAATTTACATATATTGTTAGTCCATTTAAACCAGGATCGAAACGACCAAGACCAAATTTTGATAGTTCAAGTTATGATACATCATTAGCTAGTGATGAGTTACCTGTACCTATAAATAAtctttcaatatcaaattcaccGAATCAATTATTAGATGAGCCTCAGTTTGAAATAACAAGTGCTGAGTTACAACAAGCCATGACTAATATTGATTCGGATGAATTTCAAAGACTTTTTTCGGAATTTGGACCGGATTATTCTTTAGCTATGGATGCAGCTGTTGGATACAGAAAAGCTAATAGGGGAAGACCTAGTGATAATGTCGTCAGGGTATCTCATATGAGAatacaatctagaaaatcagTCAGTGTTGAAGacattacaaaaacaaaacaagcAATTGTGGAGttgcaaaatttcatcaaGACTTATCCTACAgatgaaaaagttattaataTGTTGAGACATTATCTAATGACCGAAAACAAATCAAAtccTTTGCATGTTTCCATTCGACAGAATGAAAACACGGACGTTATGTTTTTATTGAAGATGGTTTATGTTTGGAAGCAATATGATTTGTTGAATGTTTATGATGATCAGCACGATACAGCTTTACATATTGCTGCTCAATTAAATTTGGAAGAAATTGTTGCTTTGTTGATTGCTTGTAAAGCTAATGTTTCTTTAGGAGATGCTGAAATGAATACTCCGTTACATATTGCTGTTATTAATAATGCGTCTATTACAGTATTTGAGAAGTTGTTGTCTGTTGAAAACGTAAAGGATATTATCGATTTGGAAAATAATgaaggTAATACTGCGCTGACTATTGCTATTGAAACAAACAACTTGAAAGCGTTGAAACTCCTTTGTTTAAATGGCGCTGATATTAATAGACAACACAAAAAGAACGGACATACACCTTTGAGAATTGcaatagaaaaagaaaacattcaaatagTGAAATACATCCTTGAGCATAAGGATTTAAATCCTTTGATTGAAGATTTTAACGATGTTAATCCTTTCAGAGCTGCGTTAAAAAAGGATAATTCGGATTTATTCACTGTCATTACTGAATACATGagAGAGAATAATTACGCtgatgttgaaattaaaaacgaAATTGAAGATTATTCCGATGAAGAATTTGAAGAGAAATTTGCAGTAAAACTGGAGCAAATATCTACAGATGAATTGCgtgatttatataaaaatattaaagagtTCACGCCGGAATGTTTAGATGAGATATCACAAATTTTAGATGAGTCAGGAACGTGGCAAGATTTGGCTGATCTTTTAGAATTGGGACATTTGTCAAGATCGGGGATTTGCGATTCGAGTAGTCCAACGAAATTGCTGTTGAAATTAGCTGTTGAGACTAATGGTGATTCTGTGCTCCAGATTAGAGATTTTCTAGAGAATTTGGATGAGCATAGAGTTGTGaatattattgataatatGGTTAAAACCCAATGTCTTACATAA
- Protein Sequence
- MLLENLNYPFPGQEMSSYPNILTPPSSNEDSPQPSYFIPVQENILILPPTSPAFDLDGISETTVPFLRIVEQPLDRFRFRYKSEMTGTHGSLCGQRSDRRGRQTFPTVELCNFNKNAVIRCSIYQNTQEDHKPHAHRLVKKQGKGEIDDPHDTTVSPETGYICGFHNMGIIHTAKKNLVPELIRKKTQLKKEEIHRIEGKARELKQKEEIEIKGLAEAESKSINLNVVCLRFDAFYKSPDGILLPICPPVYSHAINNLKSALTGELKIVRMDHCTSPAKGGREVFILVERVTKKNIKIRFYELDDDDNVIWENYGKFSDLDVHHQYAIVFKTPPYRDVDIKSPVKVYIQLERPSDSARSEPKEFTYIVSPFKPGSKRPRPNFDSSSYDTSLASDELPVPINNLSISNSPNQLLDEPQFEITSAELQQAMTNIDSDEFQRLFSEFGPDYSLAMDAAVGYRKANRGRPSDNVVRVSHMRIQSRKSVSVEDITKTKQAIVELQNFIKTYPTDEKVINMLRHYLMTENKSNPLHVSIRQNENTDVMFLLKMVYVWKQYDLLNVYDDQHDTALHIAAQLNLEEIVALLIACKANVSLGDAEMNTPLHIAVINNASITVFEKLLSVENVKDIIDLENNEGNTALTIAIETNNLKALKLLCLNGADINRQHKKNGHTPLRIAIEKENIQIVKYILEHKDLNPLIEDFNDVNPFRAALKKDNSDLFTVITEYMRENNYADVEIKNEIEDYSDEEFEEKFAVKLEQISTDELRDLYKNIKEFTPECLDEISQILDESGTWQDLADLLELGHLSRSGICDSSSPTKLLLKLAVETNGDSVLQIRDFLENLDEHRVVNIIDNMVKTQCLT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -