Lpla021761.4
Basic Information
- Insect
- Lasius platythorax
- Gene Symbol
- Rcbtb1_1
- Assembly
- GCA_963971435.1
- Location
- OZ020540.1:14085344-14102544[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 3.7e-20 1.9e-17 65.0 1.5 5 107 294 394 291 396 0.90 2 5 9.6 4.9e+03 -0.8 0.0 18 44 439 464 433 470 0.85 3 5 3.3e-19 1.7e-16 61.9 0.2 3 105 636 736 634 740 0.90 4 5 8.6e-19 4.4e-16 60.6 0.2 3 105 1154 1254 1152 1258 0.89 5 5 2.3e-20 1.2e-17 65.6 0.1 3 107 1536 1638 1534 1640 0.92
Sequence Information
- Coding Sequence
- ATGGCACTTACAGAGGAGGGAGAAGTGTATTCCTGGGGTTACGATGAAGAAAAATTGGATCAAGCAAGACATTCTTGTTCTGATTATGTCAGGATGGGTTTGACAATACCTACTCAAATGACTCTATTGAGAGGAAAGCACATTATAGACATTAAATGCAGCGTTACTCATTGTCTTGGTCTTACTGATGATGGAAAGGTATATATGTGGGGATATTcagatataaatgatataaattataagatagaACCAGAGACGTATTTGTCTATAGACATAGAACaagtacattttaataaagagaaaattgattGCATTGCTTGTGGTTTGTTGTTCAGTATGGCTGTCTCTAGTGAAGGTAAATTGTACAGTTGGAGCCATGACAGCGATGGTGTATTAGGGATTGGTAGTGTGCTACCAGAATTTGATCAAAACTTAAATACGTATCAAGTCACTAGTCTCTCAAACAAAATAATAGTTAAAGTAATCTGTGGGTGTGCACATACAGTTGCACTCACAAACAAAGGGAAGATCTACATCTGGGGTAGTAACAAGTACGGACATTTGGGCTTGGACCAGAAAGTACTGAGCTCCATTTATCCTATCTTGTTGGATATGACGAAAATGAAAAGAGTGTCGGACATCGCCATCAGACAGGGAAGATCTGGAAATTGTGAAAGAAATATCGCCCTTTGTGATGATAGATCTATCTACATGTGGGGTGGCATATGCTTCGATGAGCAGCTGAGGCATCCGTGTATCACACCGTTTTTTAACATGCATGAAGCTTTAATGTTTATTGACAAACCGCCAATGATATTCGCGGATTATCTTAAATACATGGACGAAGAGTTGGATATATTGGAATGCTGGGAAACTTCATTCGATAATCTTTCAACAAGCGATCTCACGATACAAGTCGAGAGGGAATCCATTCATGTTCATAAGGTTATTTTGAAGAGTCGTAGTTCATATTTCAGAACCATGTTCCAAGATGATTCAGTGGGAAACAATGAAagTGTGATCCAGCATTCTAAATATTCCTATATTGTGTATAAGGCTTTCCTGAAATACTTATATACTGATGTGATCGATCTATCTACGGAGAAATTACTAGAGCTATTGGATTTAGCTATCACATATTGCGAGAGCAAACTTGAGAGATATTGTATTCAGGAAATAAAACGTGGAATCACCATACAAAATGGAGCCCTCCTTCGCAGCACTgcggaaaaatataataaggaGGTATATATTTGGGAGTTTACGAATAAACTAGATCGGTCATCCACTAGAATATTTTGTCTGGACATGCTGAAGCAAGTGcaatttgaagaaaataagatTGTTTGCATTGCTTGTGGCCCGTTGTTCAATATGGCTGTTACTGATACGGGTAAAATATACAGTTGGGGCCATAACAATTATGGTGTACTAGGGCTTAATGTTCCTCCATCTAATTTGCACTATGATTATTTGAGCTCAACTCCGAAAAAAATTACTACACTTTCAAATGTAGTAATAGTTAAGGTAGTTTGTGGGTGTACACATGCATTGGCACTTTCGAACGAAGGACAGCTCTATGTCTGGGGTAAAAACCAATTGATCACTGATCAAGGAACGAGGGACGTCTATTATCCTGTCttgTTTAACATACCGCAAATAAAAAAGGTATTGGACATCGCTGCAGTTTATCATAGCAATAGAAGTGTCGCTCTTGGAGATGACGGAAATATCTATGTATGGGGCTGTTATTTCAAACATTATAATACGTTTCCGATTGTCACTTATTTTTCGAACATGCAGGAAGCGTTAATGTACAACATCACAGACGTTTATCCGATGATTTTATTTACGGATGATCTTGGGTACACAAATCTAGAATCGGATATATTGAAATGCTCTCAAACTTTATTCGACAATCCCTCAACAAGCGATCTCACAATAGTAGTGGAGGAGCAACCTATTTACGTTCACAAAGctattttgaaaattcgtAGTTCATATTTCGGAGCCATGTACCGACATAATTGGACGGAAAAAGATCAGAGCGTTATCAAGCATTCTAAATATTCCTACATTGTATACAAAAGCTTTCTAAAGTACTTATATACTGGAGTGATCAGTCTACCTATGCAGGAATTACTAGAGTTGTTGGATTTAGCTATCATGTACTGCGAGATTATACTTGAGAGATGTTGTATTCAGGAAATAAAACGTGGAATCAGTATACAAAATATAGCCCTCCTTCGCAGCATTGCGGAAGAACATAATAAGGAGGTAACAGTTTACAAGTCACTACTAAtagAGGTACAGAGTGACAAGACAAAGGAATTGCAAAAGAATGTTGATCAGTATCTGTTCAACTTCAAGAAATGGCCAGTCTTTATTCTGCTAGAGGAGGAATTTCTGCTGCGCATTGAATTGgctatgatatataATAATGGAGCTTTAATTGTAACGAGAGATGATATGGTATATGCCATAGGTAATAACAAGAATAATCGATTAGGAATAGCACAGgaagaaagtttaataaagccaagaaaagtagaaatattatgtaataaaaatataaagaaatttgctAATGGATTTTACATGTTTGCTCTGACTAAAAAAGGAGagGTATATATTTGGGATTATAAAGaacaacatatattaaaatataactggCAATCACAAATGGAAGTATCTGATAGATTAGATACACCTACTCAACTGATTGAATTGAGAGAGAAACGCATTATAGACATTGCCTGCAGTAATGGATATTTTCTCGCTCTCGCTGATGATGGAGagGTATATATTTGGGGGTATGTGATGCTAAATGAGTCTTCTTCAGATGTAGTATTTTGTCAGAGCAAACCAAAGCGAGTCATGtttgaagaaaataagatTGTTTGCATTGCTTGTGGCTGGATGTTCAATATGGCTGTTACTGATACGGGTAAAATATACAGTTGGGGCTGTAACAATTATGGTGTATTAGGGCTCAATGTTCCTCCATCTGATTTGCACTATGATTATTTGAGGTCAACTCCGAAAAAAATTACTACACTTTCAAATGTAGTAATAGTTAAGGCAGTTTGTGGGTGTACACATGCATTGGCACTTTCGAACGAAGGACAGCTCTATGTCTGGGGTAAAAACCAATTGATCACTGATCAAGGAACGAGGGACGTCTATTATCCTGTCttgTTTAACATACCGCAAATAAAAAAGGTATTGGACATCGCTGCAGTTTATCATAGCAATAGAAGTGTCGCTCTTGGAGATGACGGAAGTGTCTATGTATGGGGCGATTAtttcaaacattatattaCGTTTCCGATTGCCACTTATTTTTCGAACATGCAGGAAGCGTTAATGTACAACATCACGGACGTTTATCCGATGATTTTATTTACGGATGATCTTGGGTACATAAATGTAGAATCGGATATATTGAAATGCTCTCAAACTTTATTCGACAATCCCTCAACAAGCGATCTCACAATAGTAGTGGAGGAGCAACCTATTTACGTTCACAAAGctattttgaaaattcgtAGTTCATATTTCGGAGCCATGTACCGACATAATTGGACGGAAAAAGATCAGAGCGTTATCAAGCATTCTAAATATTCCTACATTGTATACAAAAGCTTTCTAAAGTACTTATATACTGGAGTGATCAGTCTACCTATGCAGGAATTACTAGAGTTGTTGGATTTAGCTATCGTGTACTGCGAGATTATACTTGAGAGATGTTGTATTCAGGAAATAAAACGTGGAATCAGTATACAAAATATAGCCCTCCTTCGCAGCATTGCGGATGAACATAATAAGGAGGtatatttttggaattatATTGAACCACATGTATTAAGATATAACTCGCAATCACAAATAGAAGTACCTGATAGATTAGATACACCTACTCAACTGATTGAATTGAGAGAGAAACGCATTATAGACATTGCCTGCAGTAATGGATATTTTCTCGCTCTCACTGATGATGGAGagAGCAAACCAAAGCCAGTGAAGtttgaagaaaataagatTGTTTGCATCGCTAGTGGCTGGTTGTTCAATATGGCTGTTACTGATACGGGTAAAATATACAGTTGGGGCTGTAACAATTATGGTGTACTAGGGCTCGATCTTCCTCCACCTAATTTGAGCAATGGTCATACGACGTCAATTCCGCGAAGAATCACTACACTCTCAAATGTAGTAATAGTTAAGGTAGTTTGTGGATTTACACATGCATTGGCACTTACGAACGAAGGACAGCTCTATGTCTGGGGTAAAGACCAATTGATCACTGATCAAGGAACGAGGGACGTCTGTTGTCCTGTCttgTTTAACATACCGCAAATAGAAAAGGTATTGGACATCGCCGCAGTTTATCATAGCAATAGAAGTGTCGCTCTTGGAGATGACGGAAATATCTATGTATGGGGCGATTAtttcaaacattatattaCGTTTCCGATTGTCACTTATTTTTCGAACATGCAGGAAGCGTTAATGTACAACCTCACGGACGTTTATCCGATGATTTTATTTACGGATGATCTTGGGTACATAAATGTAGAATCGGATATATTGAAATGCTCTCAAACTTTATTCGACAATCCCTCATCAAGCGATCTCACAATAGTAGTGGAGGAGCAACCTATTTACGTTCACAAAGctattttgaaaattcgtAGTTCATATTTCGGAGCCATGTTCGGACGTGATTGGACGGAAAAAGATCAGAGTGTTATCGAGCATCATGATTATTCCTACATCGTATACAAAAGCTTTCTAAAGTACTTATATACTGGAGTGATCAGTCTACCTATGCAGGAATTACTAGAGTTGTTGGATTTAGCTATCGTGTACTGCGAGACTAAACTTGAGAGATGTTGTATTCAGGAAATAAAACGTGGAATCagtatacaaaatatagaCTTCCTTCGCAGCATTGCGGATAAACATAAAAAGGAGAATCAAGAAATAGCTGATACAAACAAaacattttgctaa
- Protein Sequence
- MALTEEGEVYSWGYDEEKLDQARHSCSDYVRMGLTIPTQMTLLRGKHIIDIKCSVTHCLGLTDDGKVYMWGYSDINDINYKIEPETYLSIDIEQVHFNKEKIDCIACGLLFSMAVSSEGKLYSWSHDSDGVLGIGSVLPEFDQNLNTYQVTSLSNKIIVKVICGCAHTVALTNKGKIYIWGSNKYGHLGLDQKVLSSIYPILLDMTKMKRVSDIAIRQGRSGNCERNIALCDDRSIYMWGGICFDEQLRHPCITPFFNMHEALMFIDKPPMIFADYLKYMDEELDILECWETSFDNLSTSDLTIQVERESIHVHKVILKSRSSYFRTMFQDDSVGNNESVIQHSKYSYIVYKAFLKYLYTDVIDLSTEKLLELLDLAITYCESKLERYCIQEIKRGITIQNGALLRSTAEKYNKEVYIWEFTNKLDRSSTRIFCLDMLKQVQFEENKIVCIACGPLFNMAVTDTGKIYSWGHNNYGVLGLNVPPSNLHYDYLSSTPKKITTLSNVVIVKVVCGCTHALALSNEGQLYVWGKNQLITDQGTRDVYYPVLFNIPQIKKVLDIAAVYHSNRSVALGDDGNIYVWGCYFKHYNTFPIVTYFSNMQEALMYNITDVYPMILFTDDLGYTNLESDILKCSQTLFDNPSTSDLTIVVEEQPIYVHKAILKIRSSYFGAMYRHNWTEKDQSVIKHSKYSYIVYKSFLKYLYTGVISLPMQELLELLDLAIMYCEIILERCCIQEIKRGISIQNIALLRSIAEEHNKEVTVYKSLLIEVQSDKTKELQKNVDQYLFNFKKWPVFILLEEEFLLRIELAMIYNNGALIVTRDDMVYAIGNNKNNRLGIAQEESLIKPRKVEILCNKNIKKFANGFYMFALTKKGEVYIWDYKEQHILKYNWQSQMEVSDRLDTPTQLIELREKRIIDIACSNGYFLALADDGEVYIWGYVMLNESSSDVVFCQSKPKRVMFEENKIVCIACGWMFNMAVTDTGKIYSWGCNNYGVLGLNVPPSDLHYDYLRSTPKKITTLSNVVIVKAVCGCTHALALSNEGQLYVWGKNQLITDQGTRDVYYPVLFNIPQIKKVLDIAAVYHSNRSVALGDDGSVYVWGDYFKHYITFPIATYFSNMQEALMYNITDVYPMILFTDDLGYINVESDILKCSQTLFDNPSTSDLTIVVEEQPIYVHKAILKIRSSYFGAMYRHNWTEKDQSVIKHSKYSYIVYKSFLKYLYTGVISLPMQELLELLDLAIVYCEIILERCCIQEIKRGISIQNIALLRSIADEHNKEVYFWNYIEPHVLRYNSQSQIEVPDRLDTPTQLIELREKRIIDIACSNGYFLALTDDGESKPKPVKFEENKIVCIASGWLFNMAVTDTGKIYSWGCNNYGVLGLDLPPPNLSNGHTTSIPRRITTLSNVVIVKVVCGFTHALALTNEGQLYVWGKDQLITDQGTRDVCCPVLFNIPQIEKVLDIAAVYHSNRSVALGDDGNIYVWGDYFKHYITFPIVTYFSNMQEALMYNLTDVYPMILFTDDLGYINVESDILKCSQTLFDNPSSSDLTIVVEEQPIYVHKAILKIRSSYFGAMFGRDWTEKDQSVIEHHDYSYIVYKSFLKYLYTGVISLPMQELLELLDLAIVYCETKLERCCIQEIKRGISIQNIDFLRSIADKHKKENQEIADTNKTFC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -