Basic Information

Insect: Lasioglossum zephyrum
Gene Symbol: -
Assembly: GCA_028455615.1
Location: CM052333.1:4285644-4292284[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.56 49 4.8 0.5 1 23 715 737 715 737 0.97

2 14 0.0013 0.11 13.2 0.1 2 23 831 852 830 852 0.95

3 14 0.046 4 8.3 0.1 3 23 1039 1059 1037 1059 0.96

4 14 5.2 4.5e+02 1.8 0.1 1 11 1070 1080 1070 1087 0.81

5 14 0.0085 0.74 10.6 0.3 1 21 1143 1163 1143 1164 0.95

6 14 0.19 16 6.3 0.4 2 23 1191 1213 1190 1213 0.94

7 14 0.25 22 5.9 0.2 1 23 1258 1280 1258 1280 0.96

8 14 0.56 49 4.8 0.1 1 23 1299 1321 1299 1321 0.92

9 14 0.11 9.8 7.0 0.2 2 23 1467 1489 1466 1489 0.93

10 14 0.04 3.5 8.5 0.3 1 23 1538 1560 1538 1560 0.96

11 14 0.45 39 5.1 0.1 1 23 1579 1601 1579 1601 0.94

12 14 0.004 0.35 11.6 3.1 1 23 1742 1764 1742 1764 0.99

13 14 0.064 5.6 7.8 0.4 2 23 2132 2156 2131 2156 0.96

14 14 0.51 45 5.0 0.2 1 23 2158 2180 2158 2180 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.56	49	4.8	0.5	1	23	715	737	715	737	0.97
2	14	0.0013	0.11	13.2	0.1	2	23	831	852	830	852	0.95
3	14	0.046	4	8.3	0.1	3	23	1039	1059	1037	1059	0.96
4	14	5.2	4.5e+02	1.8	0.1	1	11	1070	1080	1070	1087	0.81
5	14	0.0085	0.74	10.6	0.3	1	21	1143	1163	1143	1164	0.95
6	14	0.19	16	6.3	0.4	2	23	1191	1213	1190	1213	0.94
7	14	0.25	22	5.9	0.2	1	23	1258	1280	1258	1280	0.96
8	14	0.56	49	4.8	0.1	1	23	1299	1321	1299	1321	0.92
9	14	0.11	9.8	7.0	0.2	2	23	1467	1489	1466	1489	0.93
10	14	0.04	3.5	8.5	0.3	1	23	1538	1560	1538	1560	0.96
11	14	0.45	39	5.1	0.1	1	23	1579	1601	1579	1601	0.94
12	14	0.004	0.35	11.6	3.1	1	23	1742	1764	1742	1764	0.99
13	14	0.064	5.6	7.8	0.4	2	23	2132	2156	2131	2156	0.96
14	14	0.51	45	5.0	0.2	1	23	2158	2180	2158	2180	0.97

Sequence Information

Coding Sequence: ATGGTGAATGCTAATAATGAAATGGACGGCACAAACTTTTCTACCACTGATTGTCCCAACGATAGTGTGATAAATATACCATCGATGTCACAGACGCCACAGATACATGGACTTAGACTGTTAAAATATAAATCATATTATTTGAAAAGGAAACCTAAATTTATTGACGTATGTCATTTGCAAAATGAGAGTAGCATGGTAGAAGACTTTTGCAAATTAGTGTGTAAACCAATGACTGTAAGACTTACAAGATTACCGGATTCAGAGTTGAAAAAACTGACCGCAAATGTATCGCCTAAAACTGTACCTATCAGAAGGACTCCGATGAGAAGACCACTGTTTAAGTTTTATGGTTATGGAAAGAGAAAGAAAAATAACACTATTAATAGAGAGGAATGTGGCAAAGATTGCGTACCGATTCTTACAGAAATACAGAGTAACAATATTAATAAAACTGTAGATAATAATGCTAATAAGACTGTACATAAAAATGTTTATGAAAATGCAACAGAAACAGATGCTAAGTATGTACATAGCAGAAAACGGTTACGAGTTGAAACAGCTTTCAGAGTACAAAGATCTAGCCGCCATAAACAGTGTAAAAAAGATTTATTAAGAACTGTTAAGCAACCAATCATAATATTAAATAGAATAGATGAAGTAATTAATAAGTTAGCACAATCATTTGCAAAAGTTGCTACCAATAAGCAAAACCACACGGTAGAACAACTGGCAGTCACGCAAAATATAGCTGTGACACAAACTGAGGACATTGGCTCAACGAGTACTAGCAAAAATGATTGTTCCCTGAACAATCAAGTTGCTGATAATTATAGCGAAGCAGATAGCGATGACCTGTCCCAACTCAGGTTTAAATCCAGTAGAAAACGTAAACTTTTTTCCAACTCCAGTGATGAGTCTGATATAGACCAATTGCATACACAAACATCGACACAAGCGAACATGTTAAAATTGAATACACCGCAAAAGGAAAATGCAGGTACTAGTGGAAAATGCAATGAATTACGTAGAGTGCGAAGAAAGACGTCGAAATTGAATTCACTGCAGAATGTAACTGCAAAGACTGCTAATAAACACACTAATGAGGAAGAAGTAGAAACAGCTATCGTAAACGGTGAAGTAGTAAAAAATAATATAGTGAATCTTGAAAACAAAGAAATCCGTGTTGAAAGTGACAAAGTTGATGTTGAGACTGCAAGTATGGAGTATAACTTGGACGCTTCAGAGAATGCAGTTCAAGTAAGTACTAAAAACATTACAGGAGATAGTGCTTCCAGCTTGTTACCTACAGAATTAAGTGTTGTACACAATTCGAGAGAAGATACAGGTTCTAAACCAGAGGATGAATTAGATGCTGCAGCTGGAGAGATGCAACAGATTAAATGGAAACGATCTACATCCGAGAGTGGGTCTACACAATACAAATTGCGTAAACAAGCGAAGATCCTCTTGGTAGATTTGCAACATATCAAAAGTTCATGTGGTAATAAATATTTAGCTACAGAAGTTGAAAAACTAACACTGAGAAATATAGATCCGTTGCCGAATTTTAATGTTATATGTACGACTCAAAATCTTTTGGTCCCAGGTGTAGCTTATTCAGAGAATGTTGCCGCTACATCGAAGCCTGACAACAATAATGCAGAGTCGAATGTGCGTTCTACTGAGAGCGAAAATATAATAGGACAGAAAGGAGTTGTAGGAATAGAAAAACTTTTTAATAGCGTATTGAAGAAAGACAAACTATACAAGATGATGTCCGACAGTGCCATTGGGGATCCTGTATCTTCGCATCTTCCAAAACAATCTACCAAAGAATTAGGATTGTTGAATGGAATTGAAGGCACGTCTAAGACCCTTTTGCCTTCTATACAAAAGTCTGGTAAATTTTTTATTCTTCTTAAACCAAAAGGAAGTGCTGCAAGAATGAAAGGTAAGGATTCTTTTAGTTTTAATGAAAATCTTCATATTGCAGGACACAAGAGTTCTACAATAAAATATCAATCGAAAGACGTAACCTTTAGGAATCAGAAGCCGGATGCAAAGAAGACTTCTCCAACAAAGAATGAAAAACTTACAGAGAAGAAAGATTCTAGCAAATCTAAAGAATCTTCCAGTAATTATAAATGCATTGTTTGCGATCTCTATTTCGAAGAATATTCTGTTTTGCAACAACATTTAAGTAAGCATACAAAGCAACAGCTCCCTTCATCGAAATCAAAGCATTCAGTTTCTGAAAGGTGTAGTACTGATAAAGAAATATTACGACCTTCACCTTTGACGCCAGAGAGACAAACACTACCGCAGTCTGTTACAGACAAGATTAATTGCGAAGTTGTACCTCCATCTGACAGTATTGCAGATAAAAATGTATCGTTGCATAAAAAATCGCAGAAGTTGAAGTCGCAGAAACACAAAGGTGGTTTGTCAAAGAAGAAAGTTTCACGTACACCATGTAAACTGACGGACGAGTGCAGCGTGTGTTTCAAGGAATTTCCAACAAGAGAAGATTTGGCAGCCCATATTTTCCTGCACACAGAGAGTGAGCTGCAAATAGCGTACAAAGCTGCAAAGCAGAAAAGTTCACAACAAACCGAGGTTGCAGAATCGGAAACTCAAGTGATAGAGGATGCTGTGGCAAATTCTGCTGATTCAGTTGAAAAACTTTCAACGAATACGAACGAGTGCGAAACTAGTTCAAAGGCACAGACTGCGCAGAACCAAAGCGAGCAGACATCGAAATCCGCTGCAGTTAAGGTTCCCGAAGAAGTAAAGGAAATTGATCCGAAAACAAGTAAACCAACCCACGGAAAAAGCGGTTCCAATAATCACGTAACTTCTGTGATAAATAATGTAGAGAAAGCAAAAACAACGAAGAGAAGCAGGTCGTCTAAAACATCATTTACGATATGTCAGTGCCATAATAGAGCAGACGTCAACTTCGACTACCTGAAGATTGAGATTGTTCTGCTGTGTCACACTTGCAAAGTATTGTTCCGAAGTATGGAATGTTTTGAGACTCATTATCGTCTTCCAGAGTATTCAGCTTGTAATCAGAACCGGCCGGGAAGCGGCCGATCTCCAACTTTATTCTGTGCTACTTGCGGGATGATATTTAGTTCGGTTCAAGACGTACGTCAGCATTTAGAGATGCATATCCGTTTCAAGAAAAACTGTATCATAGACTTCCGTTGCAACATCTGCAAAGTGATATTCATTGGTATCGGATCGCTGTTTCATCTCCACTGGGCTAAACACACAAGGGATTCATACTGGGTAGCCAGCGAACAATCGTTTCCTAAAATATCTTTGATCGATCAGAAGTCCAGGAAGGAGGGAGCAACGTTTGAACCAGGTGAATATGTTACAAAAAAATATGTGGATAATTACTCTTATGTTGCAGAATATGTTTGCGTGAACTGTAAACTGGCTTTCTTTAACAATGACTATTTAAAGACACATCTATTGAACTGTAAGGAAGACAGTTTAGAGAAAAGTCAGATTGTACAGTCCGATGCTACAGAAACAAGGCAATTAGAGTTGCGTTTAATTTGTAGTCTTTGCCAGGACGCTAGTTCCAGCAAAGTAGAGTTGTACAGACACATGAAGTACAGGCATAAATTCTGTTCGGAGCCCCAGTTTATGTGCACGACTCCTGGAACATTCATTTGCAGCATTTGTATGGCGATAAGTGAGAACTTAATCAAATTCAATGAACACTGGCTGAGCCATTGCGTGAAGCAACCGTATTTCGTTTGTATGTACTGCAACAAAGATAGCGACAGTGTGGATGCTTTCAAAGAGCACGCTAAAGAGCACAAATTGGCAACAAGACATAACATATCTTGTAGAGTAAAATATCGGAACGTTAAACACGTCTGTAATATATGCAATATTGGTGTTGAATCCGAGAAATTGTTAAATGAGCACAGTGTTATACACAATCCAAACGATCTGAAGCTGTCAAACGAGGAGCCTGATAAAGAAAACAATGCAACAGAAAAGCAGGCCATGGAGTGTTCGAAATCTGACACAGAACGTGACAAGGAGAAATTAATTAGTAGACTAGAAGACAACGAGGAAGAGGATTCTGAAAATGAGTTGGTAATCGACTTAGCAGAGTATCCCGAGAACGAGTCAGTAGTCAAAGACAGACCTCAAGAAAAGAAAGTTCCATGTACGTTGCCAGCAGCTGCATTGCCAACCACCGAGTTAAATGTTGTCGTGGACTCTGGGATTGAAACTGTTCCACAGAACGTTTTCGTTAATGAAGACCATTTAAAGACACATCTATTGAACAGTAAGGAAGACAGTTTAGAGAAAAGTCAGATTGCACAGTCTGATGCTACAGAAACAAGGCAATTAGAGTTGCATTTAATTTGTAGTCTTTGCCAGAACGCTAGTTCCAGCAAAGCAGAGTTATACGTACACATGAAGGACAAGCATAAATTCTGTTCAGAGCCCCAGTTTGTGTGCGTGTCTCTTGAAACTACGGAGGAAACATTCATATGCAACATTTGTATGGTGATAAGTGAGGACGTCGACAAGTTCAATGAACACTGGATGAGCCATTGTGTGAAGCAACCATATTTCGTTTGTACGTATTGCAACAAAGATAGCGACAGCGTGGACGCTTTCAAAGTGCACGCTAAAGAGCACAAGTTGGCAACAAGACATAACATATCTTGTAGAGTGAAATATCGGGACGTTAAACACGTCTGTAATATATGCAATGTTGGTGTTGAATCCGAGAAATTGTTAAATGAGCATAGTATTATACACAAATCAAATAATCTGATGCTGTCAAACGAGCAGCCTGATAAAGAAAACAATGCAACAGAACAGCAGGCCATGGAGTGTTTGAAATCTGACACAGAACGTGACAAGGAGAAATTAATTAGTATACTAGAAGGCAACGAGGGAGAGGATTCTGAAAATGAGTTGGTAATCGACTTACTAGAGCATCCCGAGAACGAGTCGGTAGTCAAAGACGTACCTCAAGAAAAGAAAGTTCCACGTATGTTGCCAGCAGTTACGTTGCCAGTACCTACATTGCCAACCACCGAGTTAAATGCGGCCGAGGATTCTAAGAAAGATAAAGATCCGATCAAAGAAGCAGAGGTAACCGAGCCTACGAAACAGAAGCACGGATTTCTGAGGGTGAGAGCTTTAACAGAGCTTTTAGAAGATACAAGCAACTTGTTCAAATGCCAGGTATGTAAATATTCTTGCGAGTCTGCTGAATATTTGAGCCAGCATTATTTGACTCATATAGTCAATCAAAAGCAACCGCAGCCTTCCCAGCCGGGGCTACCAGTTGAAAAGAAATTTATTTCGACTGGTAGGACAGTCCAGGTTCCACTTCTCTCAAGGCACTATCCAGGACCTGTGACCAAAGCGAAACTAATAGCTCCAAAACCGAATCCTGCAGTCTCTTCTGCTGCACAGGCTTCCACGAAAACGGCGTACCACAAGAATCTGCCACCTTGTAACATTGTCCGCAAAATAATTGTACAACGTAGCGCTATAAAAACATATAGAAACATTCCCACAACGATGGGGAAAGATTCTTCCAATGCACAGACTATTCAAACAGTGTCGACAGTCGATGCTAATAGTATAAACCGCCGGGAATCTGTAATTAACGCGACAAATTCGAACACAGATCCTAGCGGGGATTTGCCTTTGACGTCGAACATGATTACCGTGGATCCTAATAATTATACTTACAAAACTTCTTCGAGTCATCATCCAAAGAGTTCGAGGACACATGATTTATCAAAGTATTCGCGAAACCAATATCTGAGAAAGGTAGCCGGGAAGAATCACAAGATGGGTGGTGTTGCGGCAATGGGGAATGGCAATGTTGCAAATGATAACCAGCAGTATAGTCAGGCCCAGCACGATGTTCAGAACCAGGCAAGGATGAACTCCTCTGCATCTGTGTACTATCAGTATCCGAATTCTGGTCACGTTTACCCAGGGATTGATCAGGGGTCCATGCAAAGTCAGCAAATGATGCAACAAGTGCCGAATCACAGGATACCGAGAAACCCGTCTCCTAACTATTATTACAAGAACACCACGTCCGGTGGGATGTCGATAATTATCAATCACACAGCACCTGCTTCCTCAAATGTATCTACGGTGGATATAAGACAGCAGCAAGGACTCCAGCCACGAATCCATCCTGAGTACACGAATCAAATGGTACCAGCAGACTCGCAACATTATGCGCAACAGTCGCCGCAGAACACTATTAACTATACTGGAACTGGTGAAGTGTATCAAGTTTCGTCGAATGAATACAGAGGACCGATCAGTGAACATACTACCAACCGTGGAAAACCAATTCAATCGCCGGTAAAACTAACTTGCCCCTATTGCCCGAACTCCCGTACATTCGACACTCGGCAGAGTTTCGATCTCCATATGAACATTAGCCATAATTTCGTCTGCGATCTTTGCGGCTCATTGTTTTACAATATGGATGACATAACGATTCATAAAATCAAACACGGTTTGATGGATACTTGA
Protein Sequence: MVNANNEMDGTNFSTTDCPNDSVINIPSMSQTPQIHGLRLLKYKSYYLKRKPKFIDVCHLQNESSMVEDFCKLVCKPMTVRLTRLPDSELKKLTANVSPKTVPIRRTPMRRPLFKFYGYGKRKKNNTINREECGKDCVPILTEIQSNNINKTVDNNANKTVHKNVYENATETDAKYVHSRKRLRVETAFRVQRSSRHKQCKKDLLRTVKQPIIILNRIDEVINKLAQSFAKVATNKQNHTVEQLAVTQNIAVTQTEDIGSTSTSKNDCSLNNQVADNYSEADSDDLSQLRFKSSRKRKLFSNSSDESDIDQLHTQTSTQANMLKLNTPQKENAGTSGKCNELRRVRRKTSKLNSLQNVTAKTANKHTNEEEVETAIVNGEVVKNNIVNLENKEIRVESDKVDVETASMEYNLDASENAVQVSTKNITGDSASSLLPTELSVVHNSREDTGSKPEDELDAAAGEMQQIKWKRSTSESGSTQYKLRKQAKILLVDLQHIKSSCGNKYLATEVEKLTLRNIDPLPNFNVICTTQNLLVPGVAYSENVAATSKPDNNNAESNVRSTESENIIGQKGVVGIEKLFNSVLKKDKLYKMMSDSAIGDPVSSHLPKQSTKELGLLNGIEGTSKTLLPSIQKSGKFFILLKPKGSAARMKGKDSFSFNENLHIAGHKSSTIKYQSKDVTFRNQKPDAKKTSPTKNEKLTEKKDSSKSKESSSNYKCIVCDLYFEEYSVLQQHLSKHTKQQLPSSKSKHSVSERCSTDKEILRPSPLTPERQTLPQSVTDKINCEVVPPSDSIADKNVSLHKKSQKLKSQKHKGGLSKKKVSRTPCKLTDECSVCFKEFPTREDLAAHIFLHTESELQIAYKAAKQKSSQQTEVAESETQVIEDAVANSADSVEKLSTNTNECETSSKAQTAQNQSEQTSKSAAVKVPEEVKEIDPKTSKPTHGKSGSNNHVTSVINNVEKAKTTKRSRSSKTSFTICQCHNRADVNFDYLKIEIVLLCHTCKVLFRSMECFETHYRLPEYSACNQNRPGSGRSPTLFCATCGMIFSSVQDVRQHLEMHIRFKKNCIIDFRCNICKVIFIGIGSLFHLHWAKHTRDSYWVASEQSFPKISLIDQKSRKEGATFEPGEYVTKKYVDNYSYVAEYVCVNCKLAFFNNDYLKTHLLNCKEDSLEKSQIVQSDATETRQLELRLICSLCQDASSSKVELYRHMKYRHKFCSEPQFMCTTPGTFICSICMAISENLIKFNEHWLSHCVKQPYFVCMYCNKDSDSVDAFKEHAKEHKLATRHNISCRVKYRNVKHVCNICNIGVESEKLLNEHSVIHNPNDLKLSNEEPDKENNATEKQAMECSKSDTERDKEKLISRLEDNEEEDSENELVIDLAEYPENESVVKDRPQEKKVPCTLPAAALPTTELNVVVDSGIETVPQNVFVNEDHLKTHLLNSKEDSLEKSQIAQSDATETRQLELHLICSLCQNASSSKAELYVHMKDKHKFCSEPQFVCVSLETTEETFICNICMVISEDVDKFNEHWMSHCVKQPYFVCTYCNKDSDSVDAFKVHAKEHKLATRHNISCRVKYRDVKHVCNICNVGVESEKLLNEHSIIHKSNNLMLSNEQPDKENNATEQQAMECLKSDTERDKEKLISILEGNEGEDSENELVIDLLEHPENESVVKDVPQEKKVPRMLPAVTLPVPTLPTTELNAAEDSKKDKDPIKEAEVTEPTKQKHGFLRVRALTELLEDTSNLFKCQVCKYSCESAEYLSQHYLTHIVNQKQPQPSQPGLPVEKKFISTGRTVQVPLLSRHYPGPVTKAKLIAPKPNPAVSSAAQASTKTAYHKNLPPCNIVRKIIVQRSAIKTYRNIPTTMGKDSSNAQTIQTVSTVDANSINRRESVINATNSNTDPSGDLPLTSNMITVDPNNYTYKTSSSHHPKSSRTHDLSKYSRNQYLRKVAGKNHKMGGVAAMGNGNVANDNQQYSQAQHDVQNQARMNSSASVYYQYPNSGHVYPGIDQGSMQSQQMMQQVPNHRIPRNPSPNYYYKNTTSGGMSIIINHTAPASSNVSTVDIRQQQGLQPRIHPEYTNQMVPADSQHYAQQSPQNTINYTGTGEVYQVSSNEYRGPISEHTTNRGKPIQSPVKLTCPYCPNSRTFDTRQSFDLHMNISHNFVCDLCGSLFYNMDDITIHKIKHGLMDT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00866282;
90% Identity: iTF_00866282;
80% Identity: -