Basic Information

Insect: Lasioglossum vierecki
Gene Symbol: -
Assembly: GCA_028455595.1
Location: CM052340.1:13990778-13997472[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.59 50 4.8 0.5 1 23 716 738 716 738 0.97

2 15 0.00048 0.04 14.6 0.1 2 23 832 853 831 853 0.95

3 15 5.6 4.7e+02 1.8 2.9 2 21 999 1018 998 1019 0.94

4 15 0.049 4.1 8.3 0.1 3 23 1040 1060 1038 1060 0.96

5 15 5.6 4.7e+02 1.8 0.1 1 11 1071 1081 1071 1088 0.82

6 15 1.6 1.4e+02 3.5 0.3 1 21 1144 1164 1144 1165 0.91

7 15 0.067 5.6 7.8 0.3 2 23 1192 1214 1191 1214 0.94

8 15 1.2 1e+02 3.8 0.3 1 23 1259 1281 1259 1281 0.96

9 15 0.31 26 5.7 0.0 1 23 1300 1322 1300 1322 0.92

10 15 0.73 62 4.5 0.1 2 23 1468 1490 1467 1490 0.93

11 15 0.024 2 9.2 0.4 1 23 1539 1561 1539 1561 0.96

12 15 0.45 38 5.2 0.0 1 23 1580 1602 1580 1602 0.94

13 15 0.003 0.25 12.1 3.7 1 23 1743 1765 1743 1765 0.99

14 15 0.027 2.2 9.1 0.4 2 23 2150 2174 2149 2174 0.96

15 15 1 85 4.1 0.1 1 23 2176 2198 2176 2198 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.59	50	4.8	0.5	1	23	716	738	716	738	0.97
2	15	0.00048	0.04	14.6	0.1	2	23	832	853	831	853	0.95
3	15	5.6	4.7e+02	1.8	2.9	2	21	999	1018	998	1019	0.94
4	15	0.049	4.1	8.3	0.1	3	23	1040	1060	1038	1060	0.96
5	15	5.6	4.7e+02	1.8	0.1	1	11	1071	1081	1071	1088	0.82
6	15	1.6	1.4e+02	3.5	0.3	1	21	1144	1164	1144	1165	0.91
7	15	0.067	5.6	7.8	0.3	2	23	1192	1214	1191	1214	0.94
8	15	1.2	1e+02	3.8	0.3	1	23	1259	1281	1259	1281	0.96
9	15	0.31	26	5.7	0.0	1	23	1300	1322	1300	1322	0.92
10	15	0.73	62	4.5	0.1	2	23	1468	1490	1467	1490	0.93
11	15	0.024	2	9.2	0.4	1	23	1539	1561	1539	1561	0.96
12	15	0.45	38	5.2	0.0	1	23	1580	1602	1580	1602	0.94
13	15	0.003	0.25	12.1	3.7	1	23	1743	1765	1743	1765	0.99
14	15	0.027	2.2	9.1	0.4	2	23	2150	2174	2149	2174	0.96
15	15	1	85	4.1	0.1	1	23	2176	2198	2176	2198	0.96

Sequence Information

Coding Sequence: ATGGTGAATGCTAATAATGAAATGGACAGCACGAACTTTTCTACCACTGATTGTCCCAAAGATAGTACGATAAATGTACCATCGATGTCACAGACGCCACAGATACATGGACTTAGAGTGTTAAAATATAAATCATATTATTTGAAAAGGAAACCTAAATTTATTGACGTATGTCATTTGCAAAATGAGAGTAGCATGGTACAAGACTTTTGCAAATTAGTGTGTAAACCAATGACAGTAAAACTTACAAGATTACCAGATTCCGAGTTGAAAAAACTGACCGCAAATGTATCCCCTAAAACTGTACCTATCAGAAGAACTTCGATAAGAAGACCGATGTTTAAGTTTTATGGTCGTGGAAAGAGAAAGAAAAGGAACACTATTAATAGAGAGGAATGTGGCAAAGATTGCATACCGATTCTTACAGAAATACAGAGTAACAATATTAATAAAACTGTAGATAATAATGCTAATAAGACTGTACATAAAAATGTTTATGAAAATGCACCAGAAACAGATGCTAAGTATATACATAGCAGAAAACGGTTACGAGTTGAAACAGCTTTCAGAGTACAAAGATCTAGCCGCCATGAACAGTGTAAAAAAGATTTATTAAGAACTATTAAGCAACCAATCATAATGTTAAATAGAATAGATGAAGTAATTAATAAGTTAGCGCAATCATTTGCAAAAGTTGCTACCAATAAGCACAACCACACGGTAGAACAACTGGTAGTCACGCAAAATATAGCTGTGACACAAACTGAGGACGTTGACTCAACGAGTACTAGCAAAAATGATTGTTCCCTGAACAATCGAGTTGCTGACAATGATAGCGAAGAAGATAGCGATGACCTGTCCCAACTCAGGTGGACATCCAGTAGAAAACGTAAACTTTTTTCCGACTCCAGTGATGAAGCTGATATAGACCAATTGCATACAAAAACATCGACACAAGCGAACATGTTAAAATTGAATACACCGCAAAAGGAAATTGCAGATACTAGTAAAAAATTCAATAAATTACGTAGAGTGCGAAGAAAGATGTCGAAATTGAATTCACTGCAGGAGGTAACTGCAAAGACTGCTAATAAACACACTGATGAGGAAGAAGTAGAAACAGGTATCGTAAACGGTGAAGTATTAAAAAATAATATAGTGAATCTTGAAAACAAAGAAATCCATGTTGAAAGTGACAAAGTTGTGGTTGAGACTGCAAGTATGGAGTATAGCTTGGACGCTTCAGAGAATGCAGTTCAAGTAAGTACTAAAAACATTACAGGAGATAGTGCTTCCAGCTTGTTACCTACAGAATTAAGTGTTGTACACAATTCGAGAGAAGATACAAGTTCTAAACCTGAGGATGAATTAGATGCTGCAGCTGGAGAGATGCAACAGATTAAATGGAAACGATCTACATCCGAGAGTGGGTCTACACTAAAATACAAATTGCCTAAACAAGCGAAGATCTTCTTGGTAGATTTGCAACATATCAAAAGTCCATGTGGTAATAAATATTCAGCTACAGAGGTTGAAAAACTAACACTGAGAAATATAGATCCGTTGCCGAATTTTAATGTTATATGTACGATTCAAAATCTTTTGATTCCAGGTGTAGCTTATTCAGAGAATGTTGCCGCTACATCGAAGCCTGACAACAATAATTCAGAGTCAACTGTGCGTTCTACTGAGAGCGAAAATATAATAGGACAGAAAGGAGTTGTAGGAATAGAGAAACTTTTTAATAGCGCATTAAAGAAAGATAAACTATACAAGATGATGTCTGACAGTGCCATTGGGGATCCTGTATCTTCGCATCTTCCAAAACGATCTACCAAAGAATTAGGATTGTTGAATGAAACTGAAGGCACGTCTAAGACCCTTTTGCCTTCTACACAAAAGTCTGGTAAATTTTTTATTCTTCTTAAACCGAAAGGAAGTGCTGCAAGAATGAAAGGTAAGGATTCTTCTAGTTTTATTGAAAATCTTCATATTGCAGGACACAAGAGTTCTACAATTAAATATCAATCGAAAGACGTAACCTTTAGGAATCAGAAGCCGGATGCAAAGAAGACTTCTCCAACAAAGAATGAAAAACTTACAGAGAAGAAAGATTCTAGCAAATCTAAAGAATCTTCCAGTAATTATAAATGCATTGTTTGCGATCTCTATTTCGAAGAATATTCTGTTTTGCAACAACATTTAAGTAAGCATACAAAGCAACAGCTCCCTTCATCGAAATCAAAGCATTCAGTTTCTGAAAGGTGTAGTACTGATAAAGAAATATTACGACCTTCACCTTTGACGCCAGAGGGACAAACACTACCGCAGTCTGTTACAGACAACATTATTTGCGAAGTTGTACCTCCATCTGACAGTATTGCAGATAACAATGTATCATTGCATAAAAAACCGCAGAAGTCGAAGTCGCTGAAACAAAAAGGTGGTTTGTCAAAGAAGAAAATTTCACGTACACCATGTAAATTGACGGACGAATGCAGCGTGTGTTTCAAGGTATTTCCAACGAGAGAAGATTTGGCAGCCCATATTTTCCTGCACACAGAGAGTGAGCTGCAAATAGCATACAAAGCTGCAAAGCAGAAAAGTTCACAACAAACCGAGGTTGCAGAATCGGAAACTCAAGTGATAGAGGATGCTGTGGCAAATGCTGCTGGTTCAGTTGAAAAACTTTCAACGAATACAAACGAGTGCGAAACTAGTTCAAAAGCACAGACTGTGCAGAACCAAAGCGAGCACACATCGAAATCCGCTGCAGTTAAGGTTCCCGAAGAAGTAAAGGAAATTGATCCTAAAACAAGTAAACCAACCCACGGAAAAAGCGGTTCCAATAATCACGTAACTTCTGTGATAAATAATATAGAGAAAGCAAAAACAACGAAGAGAAGCAGGTCGTCTAAAACATCAATTACGATATGTCAGTGCCATAATAGAGCAGACGTCAACTTCGACTGCCTGAAGATTGAGATTGTTCTAATGTGTCACACCTGCAAAGTATTGTTCCGAAGTATGGAATGTTTTGAGACTCATTATCGTCTTCCAGAGTATTCAGCTTGTAATCAGAACCGGCCGGGAAGCGGCCGATCTCCAAATTTATTCTGTGCTACTTGCGGGATGATATTTAGTTCGGTTCAAGACGTACGTCAGCATTTAGAGATGCATATCCGTTTCAAGAAAAACTGCACCATAGACTTCCGTTGCAACATCTGCAAAGTGATATTCATTGGTATCGGATCGCTGTTTCAACTCCACTGGGCTAAACACACAAGGGATTCATACTGGGTAGCCAGCGAAAAATCGTTTCCTAAAATATCTTTGATCGACCAGAAGTCCAGGAAGAAGGGAGCAACGGTTGAACCAGGTGAATTTGTTACCAAAAGATATGTGGATAATTACTCTCATGTTGCAGAATATGTTTGCATCAACTGTAAACTGGTTTTCTTTAACGGAGACTATTTAAAGACACATCTATTGAAATGTAAGGAAGACAGTTTAGAGAAAAGTCAGATTGTACAGTCCGATGCTACAGAAACAAGACAATTAGAGTTACGTTTAATTTGTAGTCTTTGCCAGGGCGCTAGTTCCAGCAAAGTAGAGTTGTACAGACACATGAAGAACAGGCATAAATTCTGTTCGGAGCCCCAGTTTATGTGCACGACTCCTGGAACATTCATTTGCAGCATTTGTATGGCGACAAGTGAGAACTTAATCAAGTTCAATGAACACTGGTTGAGCCATTGCGTGAAGCAACCGTATTTCGTTTGTATGTTCTGCAACAAAGATAGCGATAGTGTGGATGCTTTCAAAGAGCACGCTAAAGAGCACAAATTGGCAACAAGACATAACATATCTTGTAGAGTAAAATATCGGAACGTTAAATACGTCTGTAATATATGCAATATTGGTGTTGAATCCGAGAAATTGTTAAATGAGCACAATGTTATACACAATCCAAATGATCTGAATCTGTCAAACGAGGAGCCTGATAAAGAAAACAATGCAGCAGAAAAGCAGGCCATGGAGTGTTCGAAATCTAACGCAGAACGTGACAAGGAGAAATTAATTAGTAGACTAGAACACAACGAGGAAGAGGATTCTGAAAATGAGTTGGTAATCGACTTAGCAGAGTATCTCGACAACCAGTTGGTAGTCAAAGACAGACCTCAAGAAAAGAAAGTTCCATGTACATTACCAGCAGCTGCATTGCCAACCACTGAGTTAAATGTTGCCGTGAACTCTGGGATTGAAACTGTTCCACAGAACGTTTTCGTTAATGAAGACCATTTAAAGACACATCTATTGAACAGTAAGGAAGACAGTTTAGAGAAAAGTCAGATTACACAGGCTGATGCTACAGAAACAAGGCAATTACAGTTGCGTTTAATTTGTAGTCTTTGCCAGGACGCTAGTTCCAGCAAAGCAGAGTTATACGTACACATGAAGGACAAGCATAAATTCTGTTCAGAGCCCCAGTCTGTGAGTGTGTCTCTTAAAACTATGGAGACAATATTCATTTGCAACATTTGTATGGTGATAAGTGAGGACGTCGACAAGTTCAATGAACACTGGATGAGCCATTGTGTGAAGCAACCATATTTCGTTTGTACGTATTGCAACAAAGATAGCAACAGCGTGGATGCTTTCAAAGTGCACGCTAAAGAGCACAAGTTGGCAACAAGACATAGCATATCTTGTAGAGTGAACTATCGGGACGTTAAATACGTCTGTAATATATGCAATATTGGTGTTGAATCCGAGAAATTGTTAAATGGGCACAGTATTATACACAAACCAAATGATCTGATGCTGTCAAACGAGCAGCCTGATAAAGAAAACAATGCAACAGAAAAGCAGGCCATTGAGTGTTCGGAATCTGTCGCAGAACTGGAGAAGCAGAAATTAATTAGTATACTAGAAGGCAACGAGGAAGAGGATTCTGAAAATGAGTTGGTGATCGACTTACCAGAGCATCCCGAGAATGAGTCGGTAGTCAAAGACATACCTCAAGAAAAGAAAGTTCCACGTATATTGCCAGCAGCTACGTTGCCTGTACCTACATTGCCAACCACCGAGTTAAATGTGGCCGAGGATTCTAAGAAAGATGAAGATCCGATCATAGTAGCAGAGGTAACCGAGCCTACGAAACAGAAGCACGGATTTCTGAGGGTGAGAGCTTTAGCAGAGCTTTTAGAAGATACAAGCAACTTGTTCAAATGTCAGGTATGTAAATATTCTTGCGAGTCTTCTGAATCTTTGAGCCAGCATTATTTGACTCATATAGTCAATCAAAAGCAACCGCAGCCTTCCCAGCCGGGGCTACAAGTTTTTCAACAACCTGCGAGCTCCACCGAACAGAGCAAATCTGTATCACTTGAAAAGAAATTTATTTCGACTGGTAGGACAGTCCAGGTTCCACTTCTCACAAGGCTCTATCCAGAAACAGCGTCCAAAGCGAGACTGATAGCTCCAAAATCGAATCCTGCAGTCTCTTCTGCTGCACAGGCTTCCACGAAAACGGCGTACCACAAGAATCTGCCGCCTTGTAACATTGTCCGAAAAGTAATTGTACAACGTAGCGCTATTAAAATAGATGGAAACGTTCCCACAACGATGGGAAAAGATTCTTCCAATGCACAGACTATTCAAACAGTGTCGACAGTCGATACTAATAGTATAAACCGCCGGGAATCTGTAATTAACGCGACAAATTCGAACACAAATCCTAGCGGGGATTTGCCTTTGACGTCGAACATGGTTACCGTGGATCCCAATAATTATACTTACAAAACTTCTTCGAGTCATCATCCAAAGAGTTCGAGGACACACGATTTATCAAAGTATCCGCAAAAACAACATCTGAGAAAGGGAATAGCCGGGAAGAATCACAACATGGGTGGTGTTGCGAAAATGGGGAATGGCAATGTTGCAAATGATAACCAGCAGTATAGTCAGGCCAGGCACGATGTTCAGAACCAGGCAAGGATGAACTCCTCTGCATCGGTGTACTATCAGTATCCGAATTCTGGTCACGTGTACCCAGGGATTGATCAGGGGTCCATGCAAAGTCAGCAAGTGATGCAACAACTGCCGAATCACAGGATACCGAGAAACCCATCTCCTAACTATTATTACAAGAACACCACGGCTGGTGGGATGTCGATAGTTATCAATCACACAGCACCTGCTTCCTCAAATGTATCTACGGTGGATATAAGACAGCAGCAAGGACACCAGCCACGAATCTATCCTGTGTACACGAATCAAATGGTACCAGTAGACTCGCAACATTATGCGCAACAGTCGCCACAGAACTCTATTAACTATACTGGAACTGGTGAAGTGTATCAAGTTTCGTCGAATGAATACAGAGGACCGATCAGTGAACATACTACCGACCGTGGAGGACCAATTCAATCCTCGGTAAACCTAACTTGCCCCTATTGCCCGAACTCCCGTACATTCGCCACTCGGGAGAGGTTCAATCTCCATATGAACATTAGCCATAATTTCGTCTGCGATCTTTGCGGCTCATTGTTTTACAGTGTCGATGAGATAACGATTCATAAAATCAAACACGGTTTGATGGATACTTGA
Protein Sequence: MVNANNEMDSTNFSTTDCPKDSTINVPSMSQTPQIHGLRVLKYKSYYLKRKPKFIDVCHLQNESSMVQDFCKLVCKPMTVKLTRLPDSELKKLTANVSPKTVPIRRTSIRRPMFKFYGRGKRKKRNTINREECGKDCIPILTEIQSNNINKTVDNNANKTVHKNVYENAPETDAKYIHSRKRLRVETAFRVQRSSRHEQCKKDLLRTIKQPIIMLNRIDEVINKLAQSFAKVATNKHNHTVEQLVVTQNIAVTQTEDVDSTSTSKNDCSLNNRVADNDSEEDSDDLSQLRWTSSRKRKLFSDSSDEADIDQLHTKTSTQANMLKLNTPQKEIADTSKKFNKLRRVRRKMSKLNSLQEVTAKTANKHTDEEEVETGIVNGEVLKNNIVNLENKEIHVESDKVVVETASMEYSLDASENAVQVSTKNITGDSASSLLPTELSVVHNSREDTSSKPEDELDAAAGEMQQIKWKRSTSESGSTLKYKLPKQAKIFLVDLQHIKSPCGNKYSATEVEKLTLRNIDPLPNFNVICTIQNLLIPGVAYSENVAATSKPDNNNSESTVRSTESENIIGQKGVVGIEKLFNSALKKDKLYKMMSDSAIGDPVSSHLPKRSTKELGLLNETEGTSKTLLPSTQKSGKFFILLKPKGSAARMKGKDSSSFIENLHIAGHKSSTIKYQSKDVTFRNQKPDAKKTSPTKNEKLTEKKDSSKSKESSSNYKCIVCDLYFEEYSVLQQHLSKHTKQQLPSSKSKHSVSERCSTDKEILRPSPLTPEGQTLPQSVTDNIICEVVPPSDSIADNNVSLHKKPQKSKSLKQKGGLSKKKISRTPCKLTDECSVCFKVFPTREDLAAHIFLHTESELQIAYKAAKQKSSQQTEVAESETQVIEDAVANAAGSVEKLSTNTNECETSSKAQTVQNQSEHTSKSAAVKVPEEVKEIDPKTSKPTHGKSGSNNHVTSVINNIEKAKTTKRSRSSKTSITICQCHNRADVNFDCLKIEIVLMCHTCKVLFRSMECFETHYRLPEYSACNQNRPGSGRSPNLFCATCGMIFSSVQDVRQHLEMHIRFKKNCTIDFRCNICKVIFIGIGSLFQLHWAKHTRDSYWVASEKSFPKISLIDQKSRKKGATVEPGEFVTKRYVDNYSHVAEYVCINCKLVFFNGDYLKTHLLKCKEDSLEKSQIVQSDATETRQLELRLICSLCQGASSSKVELYRHMKNRHKFCSEPQFMCTTPGTFICSICMATSENLIKFNEHWLSHCVKQPYFVCMFCNKDSDSVDAFKEHAKEHKLATRHNISCRVKYRNVKYVCNICNIGVESEKLLNEHNVIHNPNDLNLSNEEPDKENNAAEKQAMECSKSNAERDKEKLISRLEHNEEEDSENELVIDLAEYLDNQLVVKDRPQEKKVPCTLPAAALPTTELNVAVNSGIETVPQNVFVNEDHLKTHLLNSKEDSLEKSQITQADATETRQLQLRLICSLCQDASSSKAELYVHMKDKHKFCSEPQSVSVSLKTMETIFICNICMVISEDVDKFNEHWMSHCVKQPYFVCTYCNKDSNSVDAFKVHAKEHKLATRHSISCRVNYRDVKYVCNICNIGVESEKLLNGHSIIHKPNDLMLSNEQPDKENNATEKQAIECSESVAELEKQKLISILEGNEEEDSENELVIDLPEHPENESVVKDIPQEKKVPRILPAATLPVPTLPTTELNVAEDSKKDEDPIIVAEVTEPTKQKHGFLRVRALAELLEDTSNLFKCQVCKYSCESSESLSQHYLTHIVNQKQPQPSQPGLQVFQQPASSTEQSKSVSLEKKFISTGRTVQVPLLTRLYPETASKARLIAPKSNPAVSSAAQASTKTAYHKNLPPCNIVRKVIVQRSAIKIDGNVPTTMGKDSSNAQTIQTVSTVDTNSINRRESVINATNSNTNPSGDLPLTSNMVTVDPNNYTYKTSSSHHPKSSRTHDLSKYPQKQHLRKGIAGKNHNMGGVAKMGNGNVANDNQQYSQARHDVQNQARMNSSASVYYQYPNSGHVYPGIDQGSMQSQQVMQQLPNHRIPRNPSPNYYYKNTTAGGMSIVINHTAPASSNVSTVDIRQQQGHQPRIYPVYTNQMVPVDSQHYAQQSPQNSINYTGTGEVYQVSSNEYRGPISEHTTDRGGPIQSSVNLTCPYCPNSRTFATRERFNLHMNISHNFVCDLCGSLFYSVDEITIHKIKHGLMDT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00866969;
90% Identity: iTF_00866969;
80% Identity: -