Basic Information

Insect: Lasioglossum zephyrum
Gene Symbol: -
Assembly: GCA_028455615.1
Location: CM052329.1:9653543-9662730[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 6.5e-06 0.00057 20.4 1.0 1 23 218 240 218 240 0.98

2 29 0.0084 0.74 10.6 3.6 1 23 263 286 263 286 0.96

3 29 0.00014 0.012 16.2 0.5 2 23 293 315 292 315 0.96

4 29 0.0031 0.27 12.0 0.6 2 21 337 356 336 357 0.92

5 29 0.03 2.6 8.8 0.1 2 23 452 473 451 473 0.94

6 29 0.0031 0.27 12.0 0.6 1 23 479 502 479 502 0.92

7 29 0.00012 0.011 16.4 0.1 1 23 568 591 568 591 0.96

8 29 0.025 2.1 9.1 0.4 1 23 597 620 597 620 0.96

9 29 0.064 5.6 7.8 0.8 1 23 633 655 633 655 0.97

10 29 3.7e-05 0.0032 18.0 0.9 3 23 699 720 698 720 0.96

11 29 0.0044 0.38 11.5 1.0 2 23 780 803 779 803 0.95

12 29 3.2 2.8e+02 2.5 0.0 2 23 812 834 812 834 0.84

13 29 0.1 9 7.2 0.1 2 23 841 863 840 863 0.95

14 29 1.4e-05 0.0012 19.4 1.2 1 23 871 893 871 893 0.98

15 29 1 88 4.0 3.0 2 23 920 943 919 943 0.94

16 29 0.00022 0.019 15.6 3.3 1 23 946 969 946 969 0.97

17 29 0.00065 0.057 14.1 0.6 2 23 976 998 975 998 0.96

18 29 0.00095 0.083 13.6 3.9 1 21 1022 1042 1022 1043 0.95

19 29 0.0028 0.24 12.1 1.8 2 23 1057 1078 1056 1079 0.93

20 29 0.26 23 5.9 1.1 1 23 1082 1105 1082 1105 0.94

21 29 0.039 3.4 8.5 1.0 2 23 1112 1135 1111 1135 0.89

22 29 3.2 2.8e+02 2.5 0.2 2 23 1143 1165 1143 1165 0.94

23 29 0.24 21 6.0 2.7 2 23 1203 1225 1203 1225 0.96

24 29 1.8 1.6e+02 3.3 0.1 2 23 1231 1253 1231 1253 0.95

25 29 0.00019 0.016 15.8 0.2 1 23 1316 1339 1316 1339 0.96

26 29 0.0012 0.11 13.2 0.8 1 20 1364 1383 1364 1385 0.93

27 29 0.52 45 5.0 1.3 2 23 1482 1504 1481 1504 0.94

28 29 0.3 26 5.7 0.2 2 23 1511 1533 1510 1533 0.94

29 29 5 4.3e+02 1.9 2.6 1 23 1544 1566 1544 1566 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	6.5e-06	0.00057	20.4	1.0	1	23	218	240	218	240	0.98
2	29	0.0084	0.74	10.6	3.6	1	23	263	286	263	286	0.96
3	29	0.00014	0.012	16.2	0.5	2	23	293	315	292	315	0.96
4	29	0.0031	0.27	12.0	0.6	2	21	337	356	336	357	0.92
5	29	0.03	2.6	8.8	0.1	2	23	452	473	451	473	0.94
6	29	0.0031	0.27	12.0	0.6	1	23	479	502	479	502	0.92
7	29	0.00012	0.011	16.4	0.1	1	23	568	591	568	591	0.96
8	29	0.025	2.1	9.1	0.4	1	23	597	620	597	620	0.96
9	29	0.064	5.6	7.8	0.8	1	23	633	655	633	655	0.97
10	29	3.7e-05	0.0032	18.0	0.9	3	23	699	720	698	720	0.96
11	29	0.0044	0.38	11.5	1.0	2	23	780	803	779	803	0.95
12	29	3.2	2.8e+02	2.5	0.0	2	23	812	834	812	834	0.84
13	29	0.1	9	7.2	0.1	2	23	841	863	840	863	0.95
14	29	1.4e-05	0.0012	19.4	1.2	1	23	871	893	871	893	0.98
15	29	1	88	4.0	3.0	2	23	920	943	919	943	0.94
16	29	0.00022	0.019	15.6	3.3	1	23	946	969	946	969	0.97
17	29	0.00065	0.057	14.1	0.6	2	23	976	998	975	998	0.96
18	29	0.00095	0.083	13.6	3.9	1	21	1022	1042	1022	1043	0.95
19	29	0.0028	0.24	12.1	1.8	2	23	1057	1078	1056	1079	0.93
20	29	0.26	23	5.9	1.1	1	23	1082	1105	1082	1105	0.94
21	29	0.039	3.4	8.5	1.0	2	23	1112	1135	1111	1135	0.89
22	29	3.2	2.8e+02	2.5	0.2	2	23	1143	1165	1143	1165	0.94
23	29	0.24	21	6.0	2.7	2	23	1203	1225	1203	1225	0.96
24	29	1.8	1.6e+02	3.3	0.1	2	23	1231	1253	1231	1253	0.95
25	29	0.00019	0.016	15.8	0.2	1	23	1316	1339	1316	1339	0.96
26	29	0.0012	0.11	13.2	0.8	1	20	1364	1383	1364	1385	0.93
27	29	0.52	45	5.0	1.3	2	23	1482	1504	1481	1504	0.94
28	29	0.3	26	5.7	0.2	2	23	1511	1533	1510	1533	0.94
29	29	5	4.3e+02	1.9	2.6	1	23	1544	1566	1544	1566	0.92

Sequence Information

Coding Sequence: ATGGAGCCCAGGGAACGCTATCAGGAGCTCTGCAGACTTTGCGCATCCTACGACGCCGTCAAGATGGACATCTTCGGTCAAGAGGGCAAGAATAGACAGCTTGTTGACAAGATACAAGCTTGTCTACCGTTTAAGATTGCAGAAGATGATCGGCTACCAAAATGCCTGTGTTACCGATGCATGTACAATTTGGAAAATTTCTATGATTTTAGAACGGCATGCGTTAATGCGGTGGCCCTCTTGGAAAGATGTTTACCACCATCGGAAAAAGTCGAAGGTGTCACGACCACCTTGAGATGCTGCAACGACTCAGTGCTCTTGAAGCGAAAAGACAACATACCGATGTTGATCCCAGAAGCCCCTATTGTGAATCCTAATGCTGCCTTAGGCACACCGCCTAGATTAAATTCCGATGAAGAAGCAGATCACGAGTCCGAAGAACTTGTCGATAATAGCGGCACGGATGAAGCAACAATAGTGGACGACTCTGAGGATCATCGTTCGGAAGAGTATGAAATGGACATGGAAACGAATCCGAGCGATTTTTTGGAGATGACTTCGATAGTCGCTGAAGAATCTGAAGATTTAGAGATGAAACATCAAGAACATTCTAACAATATTCCAGAGCATACATCTCAACAACACGAAGTTTATGTTTGTTCTTTGTGCAATAAAGCATTCAGTTCAAAGGGTCATTTATCTTTGCACGCGCGTATTCATGTCGGGGCTGGCGATGTAATTGGCGAAAAAGTTCTTACGGACGATCACACTTCCTATAAGAGACCCTATCAGTGCGATCTTTGCCATAAATCTTATTCAACCGCAAAGCATCGTTGGGGTCACGTCTCGACATCTCACAGAGGCCACCCAGCAGTGACATGTGGTTATTGTTCCCGGATCTACTCGACACGAACAAATTTGGAAGAACATATAAAATCACGTCATGCTGGTCTTCCAGCGCCCTTGGAGGTTCCTGTGAATAATACCTACAGACCAGAGAACAGATGCCAGTGTAATGTTTGTGGAAAGATTTGCACGGATGCCATGGAATTAAATCTCCACGGCAGAGTCTGCATCGAAGAACAACGATCCGATTTTCTGACAAAGAGCGAGAACAAGGATGCTAAAATTGTAGACAGTTGCGAAGGGTCGAGCATTGGTAGCGATGAAGATAGCAAAGATTACAGAACTGCAGAAGCAAAACTAGCTAAGAATCCTCAACTAACGATCTTGAAGCAAGCACTGATGAAAGGTGATAGCCTTAAGCGGGACTTAGAAGACAAACTCACGAATTGTAAACCAAATAAACTGCCAAAAACAGAAAACACAGATGTTAAGAGCGACAAGAAATGGTACTGTGAGTCGTGTCCTCAATTTTTCACTTCGGTCGAAAGCTTGAAAGAGCATGAAGCAATTCACGACGCTGACAAGCCGTACATCTGTATTCTATGCAAAAAGGATTTTGTTCTCAAGTCTTCCTTGAGTAGACATATTCAAACGTTACACGGCGTCGATCCATATCCTATTGTAGAAAGCGATAAATGTTTAAAGAAGATTCTTTCACGGCATTGGAATGAATCGATGGATCTCGACTATGAACGAAAAACCGCGGAATTCCCGCTATCCCCGGAGATGAATGCTGAGAACGAAGAGGACGATCACGAGAGTGGACAGGAAAATCTTATCGAAATTGAAACCGTATTCGTTTGCGAAATCTGTACCCGCGATTTTAACGATCGCGCTTCGCTCTGGCTTCACATTCGAGCCACACACAAAGAATTTGCAGCGTTCGCGTGCGGTGTTTGTTTGAAAATCTGCGCGGACAATACACAACTTCTGAATCACGTAAATATGTATCATGGTGGATCAAAATTGTTGCTCTCTGAACAAAGAAGGTACAGCTGTACAATTTGTGGCAGACAACATGACTCTAGAAAGAAATTAATCGCACACGTATCCATACACAACGTAGATCCAAATTATGATCCAGCAACCTTCGTACAATTGAACAGTAACTATTACGGGGAGAATATCAATGGTAACGAAACTACGGAAACGATGCTCGACTACGAGGAAGAGGGAGACAAAGTAGACTGTTACATTTGTTACAAGTCGTTTCCAAACGAAGACCATTTGATACGGCATCAGAGAAATGCACACAGATCTGAGCAGCCAATGCTGGCAGGAGACTCCTTAAATCAGTCTAATTTGAACGGTGGTGGTAACAGAGCTCAATACCACTTGTTCTTCGTTTGCGAGCTCTGCGGGAGTTCGCATCCTAGTAAATGGGAACGTTGGTTGCACGTGAGCTCGTCCCACGCGAACGAGCCGGCCATAAAATGTGATCGCGACGACTGCGGTAAAATTTTCGCGACAAAGTCGCTTAGGAACGATCACGTTCAGCATCATGCGATTCAAGGCCCCTCTCCGAACACGTGCGAAATTTGCGGCAAACTTTGGGGCAGCAGAGTGGATTATTGGAAGCACGTTATGGGCGTTCATTCGGACACCGTCCCATTGATTTGCGGCGTTTGTCTGAAGGTTTTCCCGAATGTGTTGCAATTAAGTAGCCACGTGAAATCGAAACATTGGCCATTGACGAACGGTGATTTCAGTTGTGATATATGTGGAAGACCGTATTCGAACAAATCGAAAATGTCCAGGCATAGGAAAATCCATGGCTTCGAAGAAACCTGCGACAATGGAGTCGAAAGTAACGAGAACAAACCGGACGGACGAGTCAGAGAAACTGAACTGAGTTGTGAACATTGTACAGACTTGAAGTTCGCTACTTTAGAGAAGTTGTGTAATCATAGGCGAATCGTCCACGGCCTTTTCCCTTGCGATCTCTGTAATAAATGTTACGGGAGGACCTCGCACCTATGGAAACACGTTAATAGAGTCCACAAAGGTCACGAGGATGTTACATGCCCCTATTGCTTGAAAACTAGCGCGTCGAAGGATCACCTGGCTACCCATATTTCGAAAATTCACAGGTACGAGCCTGATTCTAGAAAAGACGGTAAAGACACTAGGCAATTTAAAACCGACGAAGTTATTCTTCATTATTGTGAGAAATGTAACAAAGGATTCCACAAGCGATACCTGTTGCGTAGACACATGAAAGGTTGTCAGAATTATAGGAAGGATCCTGGCGCGTTGCTTACTCGTTGCAGAGCTTGCGAAAGGATTTTCAAGGACCGAGCTAGCTTACAGAAGCATATAGAGAATCATCATAGCACGTACACTTGTCATCTTTGCGATGAAACGATCACTTCGAAGTTAGGAATTATGACACACAACAGAGTGAAGCATATGGATCATCCGGATTTGACTTGTAATTTCGGAGCTTGTAAGAAGTTGTTCAGGACAAAGGAAGACTTGGAATCGCATAAGAAGGATCACAGATATCATACGAATCCTAACGTTTGCGATTTCTGCGGCGACACTGTCGAGAATAAGCTGAAATTGAAGATGCACGTGCTGTCCCTTCATCGTAACGAGATCGGAGTGTCTTGCGGAGTATGTTTAATCCCGATGAAAGATCCGAAAGAGCTCAAGGGTCATGTGGAAGAAGTTCACTCCAGTGTTCTGTCGAAACCTAACACCTGTCAAGTATGCGGTAAACAGTATGCTTCGAAATGGAAAGCTTTCGACCACACTAAGAAATGTCACGGCAAGGTATTCCGGACTTGTAAACAATGTTTAGCTGTTTTCACAGAAGATTCCGCCATCAGAGATCATTATGAAACGGTACATAACGTTCCGAAAGATCAACTCGCGGCGTTCGAATACAGGTTGGACATCGGATCGAAACATGACGATTATGAAATCGAGTCTCCCGATGTTATTGTGAAAGAAGAACCATACGATATGGAGTACGACGTGGATCTGTGCGACGAGGATTCCAGCGATTCGAAAAGGAGAAGATCGTTGACCGATACATTCGACTGTGAAATGTGTCCCGAGATGTTTGTGAACAGCGACGCCCTTTCGACGCACTATCGCAACATGCATAACACAGATCCAGAAAGAATGTTCAAGAGACTGAAGCAGGAAGAACAAAGAAGAACCCGTGGAAAACTAAGTTTCGCTTGCAAGAATTGTAAAAAACAATTTAGTACAAAGACGTTGTATTGGAATCATATTGGAACATGCAGGAGAAACGCTTCTCGAAAAGAAGAGGAACTTTCATCTTCGCAGAACGACATGTTGGATAATCAAGAAGAAATTTTGAAAAATAATAATCAAATCAAAAAAGAAGAAAGTACATCGAACTTGAATATCCCAGACTTTAATCTATTCGAAGACATAAATCTTCAATTGTCAGGTCAAAGACCTCTTCCGAATCTGATGCCGTTATCTCAGAGGGTGAAATCGTCGATGAAATGTTCGAGGAAAGATTCGAGAAAAGTGTACGACGAGTCAACGAATACAGAATGTGCTTGCGAAGTCTGTGGAAAACAGTGGCCAGCGAAGAAACATTTATGGCAACATTTAATTCGTTTCCATCGAACAGAAGCTGCGGTAACCTGTGGAGTGTGTTTGAAGCTCTGCAAGGACTACGACGATTTAGCAGAACATTTAAAAGCCGTACACGCTGCGATCCTTTCTTGCGAAGGAAACAACTTCACGTGTAAAACTTGTGGCAGGTATCACAATGCACGTAGTAAGCTGTTGTTACACACGAGCATTCATATCGGACACGCGAGCAACGGTACTACATGTCCGAAATGCTATAAGAATATTACCGACGAAACTGATCATTCTAGTTCGTGTACTGGAAAAACAGAAGAGGAGCATTTGAAGAACGAGAAGAAGCCAGAAGGAAGCCTAATAACGGACGACGCTATGATAGAAGAAGTGGAAGAAGGGGACTTCGAGTCTGAGGCGGAAGAGGCAGATTCAGCGGAATCAGATAGCGGTAGTAGCACGGAGGTAGAAGAGGACAATGATTCCGAAGGAGAATCCAGAGCCACAGGAGAAATCACGTACAATTCAGATACCGATGATGATTCCGAGGAATTGGGTAATCTAGAAATGGATAAGAATATGCAGCATTTTAATCTGGAAGGTCTTCAGGAGTCCAAAGACACTGAAGCGGAGAAAAACGACGTTGATTTGTCGGACGATTACGGTCCTCCTGTGCTTAGCCCTATGATGCCTCTCCTACCTGGAAATATGTCTGGAGAACCGTCAGCTGGCCGCAAACTTGGTTCACTCGGGACGCTAACGAACAAAGAGATGGGAATTTGTAACTTGACAGAAATTCAAAATCAATCCTCTCCGAAATCGGTGAATTTCTACGGCAAGGGTTTGTCGAACAATGAATCTTTGGATTTTGAATCTGAGACATTTATGAATCGAAGTGAGGAGGAGTACGAAGACGCGAAAAATGAATATGACGAGAATTCTATGGAAGAGAATGAAGACAGCGGGGAGAACGACGGTAACGACGAAGCAGCGGACAACGAAGAACACGAAGAAGTCGAGCAGAACGAGGATAACGAAGAGAGTCGTGAGATGGAGGTGGACGAAGACAGCGAGGGAAGCGACTTGTACGAAGAAACTGAAGATAACGAGGACAATGAGTCGAACGAGGAAATTGAAGATAACGAAGACAACGAGGAACAAGAACAGAATTACGAGAACGACGAGAATGTAGAAAACGAACAGAGCGAGGATAATGAGAACGAGGAAAAAGTAGAAGGCATGCAATTGGATGATTTAGAGAATGCTGTACTAATGGTGACCGACGGGAATGAAATACTGATACAACAAGATATATTAGAGGATGGAATTGAAAACGTGAACCAAGCGTACGTTTATTCTACACTTGCTTACAGTACTGACGAGGACAGTGACGATGCGGGGAAATGA
Protein Sequence: MEPRERYQELCRLCASYDAVKMDIFGQEGKNRQLVDKIQACLPFKIAEDDRLPKCLCYRCMYNLENFYDFRTACVNAVALLERCLPPSEKVEGVTTTLRCCNDSVLLKRKDNIPMLIPEAPIVNPNAALGTPPRLNSDEEADHESEELVDNSGTDEATIVDDSEDHRSEEYEMDMETNPSDFLEMTSIVAEESEDLEMKHQEHSNNIPEHTSQQHEVYVCSLCNKAFSSKGHLSLHARIHVGAGDVIGEKVLTDDHTSYKRPYQCDLCHKSYSTAKHRWGHVSTSHRGHPAVTCGYCSRIYSTRTNLEEHIKSRHAGLPAPLEVPVNNTYRPENRCQCNVCGKICTDAMELNLHGRVCIEEQRSDFLTKSENKDAKIVDSCEGSSIGSDEDSKDYRTAEAKLAKNPQLTILKQALMKGDSLKRDLEDKLTNCKPNKLPKTENTDVKSDKKWYCESCPQFFTSVESLKEHEAIHDADKPYICILCKKDFVLKSSLSRHIQTLHGVDPYPIVESDKCLKKILSRHWNESMDLDYERKTAEFPLSPEMNAENEEDDHESGQENLIEIETVFVCEICTRDFNDRASLWLHIRATHKEFAAFACGVCLKICADNTQLLNHVNMYHGGSKLLLSEQRRYSCTICGRQHDSRKKLIAHVSIHNVDPNYDPATFVQLNSNYYGENINGNETTETMLDYEEEGDKVDCYICYKSFPNEDHLIRHQRNAHRSEQPMLAGDSLNQSNLNGGGNRAQYHLFFVCELCGSSHPSKWERWLHVSSSHANEPAIKCDRDDCGKIFATKSLRNDHVQHHAIQGPSPNTCEICGKLWGSRVDYWKHVMGVHSDTVPLICGVCLKVFPNVLQLSSHVKSKHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGFEETCDNGVESNENKPDGRVRETELSCEHCTDLKFATLEKLCNHRRIVHGLFPCDLCNKCYGRTSHLWKHVNRVHKGHEDVTCPYCLKTSASKDHLATHISKIHRYEPDSRKDGKDTRQFKTDEVILHYCEKCNKGFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSTYTCHLCDETITSKLGIMTHNRVKHMDHPDLTCNFGACKKLFRTKEDLESHKKDHRYHTNPNVCDFCGDTVENKLKLKMHVLSLHRNEIGVSCGVCLIPMKDPKELKGHVEEVHSSVLSKPNTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFTEDSAIRDHYETVHNVPKDQLAAFEYRLDIGSKHDDYEIESPDVIVKEEPYDMEYDVDLCDEDSSDSKRRRSLTDTFDCEMCPEMFVNSDALSTHYRNMHNTDPERMFKRLKQEEQRRTRGKLSFACKNCKKQFSTKTLYWNHIGTCRRNASRKEEELSSSQNDMLDNQEEILKNNNQIKKEESTSNLNIPDFNLFEDINLQLSGQRPLPNLMPLSQRVKSSMKCSRKDSRKVYDESTNTECACEVCGKQWPAKKHLWQHLIRFHRTEAAVTCGVCLKLCKDYDDLAEHLKAVHAAILSCEGNNFTCKTCGRYHNARSKLLLHTSIHIGHASNGTTCPKCYKNITDETDHSSSCTGKTEEEHLKNEKKPEGSLITDDAMIEEVEEGDFESEAEEADSAESDSGSSTEVEEDNDSEGESRATGEITYNSDTDDDSEELGNLEMDKNMQHFNLEGLQESKDTEAEKNDVDLSDDYGPPVLSPMMPLLPGNMSGEPSAGRKLGSLGTLTNKEMGICNLTEIQNQSSPKSVNFYGKGLSNNESLDFESETFMNRSEEEYEDAKNEYDENSMEENEDSGENDGNDEAADNEEHEEVEQNEDNEESREMEVDEDSEGSDLYEETEDNEDNESNEEIEDNEDNEEQEQNYENDENVENEQSEDNENEEKVEGMQLDDLENAVLMVTDGNEILIQQDILEDGIENVNQAYVYSTLAYSTDEDSDDAGK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00218574;
90% Identity: iTF_00966151;
80% Identity: -