Lvie018720.2
Basic Information
- Insect
- Lasioglossum vierecki
- Gene Symbol
- dsx
- Assembly
- GCA_028455595.1
- Location
- CM052336.1:12897878-12899805[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-24 7.2e-21 74.0 10.8 3 47 30 74 28 74 0.98 2 2 2.5 8.4e+03 -3.1 0.0 20 26 166 172 165 174 0.70
Sequence Information
- Coding Sequence
- ATGGAAACGAAGGACGGGGTCCTTACTACGCGGACGGGAAAGAACGCATCCACGACCTCGACGACAACCCAGAGTCCACGGACACTACCTAATTGCGCGCGATGCCGCAATCACCGATTGCAAATCCCTCTTAAGGGTCACAAAAGGTACTGTAAGTACCGCACATGCAAGTGCCCTGAGTGCACGCTGACCGCGGACAGGCAACGGGTGATGGCGAAGCAGACCATGCGGAGAAGAGCCCTGGCGCAGGACGAGAACAAGATCAGGGTTGCCGATGAGCAGGTGGATCCACCGCCGTTTGGGATGGAGAGTGATCGTCTTTCTGCTGTTCTTCAGCCGGCCGGAAGCTTCGAGGGCAGCTACGACAGTAGTAGCGGCGACGCACCGATCAGCAATCACGGCGGAAACGGTATGCACACCGGTTTAGGCGGTGCCATCACTATCCCAAACTCGAGGAAAGTGACACCGTCGCATCCACACACTGGAACGCCCAGCCATTTACCGCAGTGCCAGTTCGGTAAGCGACAATTTGCATTTACTCCTTTGCTTTTCCTCTAA
- Protein Sequence
- METKDGVLTTRTGKNASTTSTTTQSPRTLPNCARCRNHRLQIPLKGHKRYCKYRTCKCPECTLTADRQRVMAKQTMRRRALAQDENKIRVADEQVDPPPFGMESDRLSAVLQPAGSFEGSYDSSSGDAPISNHGGNGMHTGLGGAITIPNSRKVTPSHPHTGTPSHLPQCQFGKRQFAFTPLLFL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00866728;
- 90% Identity
- iTF_00866728;
- 80% Identity
- -