Lvie000726.1
Basic Information
- Insect
- Lasioglossum vierecki
- Gene Symbol
- dmd-4
- Assembly
- GCA_028455595.1
- Location
- CM052344.1:2145622-2148947[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.5e-26 2.2e-22 78.8 10.3 1 47 23 69 23 69 0.99 2 2 0.53 1.8e+03 -0.9 0.3 2 8 349 355 348 357 0.79
Sequence Information
- Coding Sequence
- ATGCTGCGAGGGAAGAGTAGAAGCAAGCCGGAGAACGAGGACGAAGAAGATGGCCAGACGAAACAGAGGAGGCCGAAGTGTGCACGTTGCCGGAACCACGGGCTGATCTCATGGCTTAGAGGACACAAGAGGGAATGTCGGTACCGGGACTGTCTTTGCCCTAAGTGCTCCTTGATCGCGGAGCGGCAGAGAGTAATGGCGGCGCAGGTGGCACTGAAGAGGCAACAGGCAGCCGAGGACGCCATCGCCCTGAAAATGGCCAAGGTAGCGACTGGACAGAAGCTGAACCGACTACCACCAGGCAAGATCTTCGGAATGGCGATCACCGAGCCTAAGTCATCCATAGACACCGAGAAACACGGACAATCAGCTACTGAAGAGGGTCAGCCGGCGTCCGAAGACCAGAAGAAAGAGGACTCCAAGGTCCAAGGTCAAGAACCTCCTACGGCCGGGGAGAACTTGGCGAAGCTGAAGAGCCTGGTGTTCAACGGCGGCAAGCAGGAGGAGTCGAAAGAGAGCAGCGTGTCTCAGACGTCGGTAGACACACTGGCTCGATTGTTTCCCAACACGAAGCTGTCGGTGCTGCAACTGGTGTTGCAAAGGTGCGGTCAGGACCTGTTGAAGGCGATAGAATACTTTGCCAGCGACAGCCTTGGCATCGGTTCAACCGCCTACACGTCTGCCTTCCGGCCTCCCAGTCAAAGTATCAATGAAACCCGACCGACCGACCAACTGACCGGCTCCATGCTAGCCCCTATCTATTCGAACCTCTCGAGAAGCCTCTACAGCGACAGTTATTGCGTGCTGAACATCATCCCCGACCAATTCCCGAAAAGCATCGTGGCGGACGCTGCCACCTGTACAGCTTTGCCAAAGCATGATCAAGACAGCGTTGCCCTGAACGTTCAGTATAATAGTTACTTCAATGCTGGCCTCCAACAACAGATAAGGGATCACGTGTACGCCCAGGTCACAGAACACCTTCCGTCCAGACCGGGGTTCCTTCATCTACCCCCTATCATGCCTGGGATGCCTGCTTGCGTGCAGCCTAACTGCACTCAGTGCGCATACAAGTTCCCTTAA
- Protein Sequence
- MLRGKSRSKPENEDEEDGQTKQRRPKCARCRNHGLISWLRGHKRECRYRDCLCPKCSLIAERQRVMAAQVALKRQQAAEDAIALKMAKVATGQKLNRLPPGKIFGMAITEPKSSIDTEKHGQSATEEGQPASEDQKKEDSKVQGQEPPTAGENLAKLKSLVFNGGKQEESKESSVSQTSVDTLARLFPNTKLSVLQLVLQRCGQDLLKAIEYFASDSLGIGSTAYTSAFRPPSQSINETRPTDQLTGSMLAPIYSNLSRSLYSDSYCVLNIIPDQFPKSIVADAATCTALPKHDQDSVALNVQYNSYFNAGLQQQIRDHVYAQVTEHLPSRPGFLHLPPIMPGMPACVQPNCTQCAYKFP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00183966;
- 90% Identity
- iTF_00861897;
- 80% Identity
- -