Basic Information

Insect: Lasioglossum pauxillum
Gene Symbol: RREB1
Assembly: GCA_028455745.1
Location: CM052304.1:21799508-21806795[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.036 4.1 8.6 1.5 1 23 41 63 41 63 0.96

2 15 0.00021 0.024 15.6 0.1 1 23 77 99 77 99 0.97

3 15 3.6e-06 0.00041 21.2 1.3 1 23 105 128 105 128 0.98

4 15 0.013 1.4 10.0 1.2 1 23 220 244 220 244 0.96

5 15 9.3 1.1e+03 1.0 0.4 1 10 328 337 328 346 0.88

6 15 0.18 20 6.4 0.1 1 23 462 484 462 484 0.96

7 15 6.6e-05 0.0074 17.2 0.6 1 23 493 515 493 515 0.98

8 15 0.0012 0.13 13.3 2.8 1 23 521 544 521 544 0.97

9 15 0.00086 0.097 13.7 2.8 1 23 925 948 925 948 0.97

10 15 0.00062 0.07 14.1 0.1 3 23 1227 1247 1225 1247 0.97

11 15 0.86 97 4.2 6.5 1 23 1253 1276 1253 1276 0.97

12 15 0.0039 0.44 11.6 2.2 1 23 1314 1338 1314 1338 0.97

13 15 0.3 34 5.7 5.7 1 23 1421 1444 1421 1444 0.96

14 15 0.011 1.2 10.3 0.4 2 23 1495 1516 1494 1516 0.94

15 15 1.2 1.4e+02 3.7 8.2 1 23 1522 1544 1522 1544 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.036	4.1	8.6	1.5	1	23	41	63	41	63	0.96
2	15	0.00021	0.024	15.6	0.1	1	23	77	99	77	99	0.97
3	15	3.6e-06	0.00041	21.2	1.3	1	23	105	128	105	128	0.98
4	15	0.013	1.4	10.0	1.2	1	23	220	244	220	244	0.96
5	15	9.3	1.1e+03	1.0	0.4	1	10	328	337	328	346	0.88
6	15	0.18	20	6.4	0.1	1	23	462	484	462	484	0.96
7	15	6.6e-05	0.0074	17.2	0.6	1	23	493	515	493	515	0.98
8	15	0.0012	0.13	13.3	2.8	1	23	521	544	521	544	0.97
9	15	0.00086	0.097	13.7	2.8	1	23	925	948	925	948	0.97
10	15	0.00062	0.07	14.1	0.1	3	23	1227	1247	1225	1247	0.97
11	15	0.86	97	4.2	6.5	1	23	1253	1276	1253	1276	0.97
12	15	0.0039	0.44	11.6	2.2	1	23	1314	1338	1314	1338	0.97
13	15	0.3	34	5.7	5.7	1	23	1421	1444	1421	1444	0.96
14	15	0.011	1.2	10.3	0.4	2	23	1495	1516	1494	1516	0.94
15	15	1.2	1.4e+02	3.7	8.2	1	23	1522	1544	1522	1544	0.98

Sequence Information

Coding Sequence: ATGAATAAAGTCACCTGCCGGGCAGTTACTGTCAAGAGTAGCCCCGATCAGGGACGCGACAACGAAGCCCAAGTTGATGCAGCATCGCCACTCTCAAGTGTGGAGTTACCGGAAAGCGCTCACCCCTGTCCCGCGTGCCCCACGGTGCTGCCTAGCTGCCGAGAGCTGACACACCACCTGCGCGACCACAACTCTCCGCGCAGCACCGATTGCAGCGTCGAGGACGATTTCAGTTGCGGCGTTTGCAACAAGGTGCTGAGCTCCGCGAGCTCTTTGGACAGACACGTGCTGGTGCACTCCGGAGAACGACCGTTCAAATGCAAATTCTGCGAGATGGCGTTCACAACAAACGGAAACATGAACAGACACCTGCGAACAGCGCACTGTTCAACCTCCTCGCTCAGTTGCACGGACTCGGAAGTTAGTTGCGACTCGGAGAAACTGTCGAAGAGGAACATCGAGGAGTACAACAACAACGAGATCGCGAAAAGGAAATCGCCGGACTTGATCGACCAAGATCAGGAAAAGAGTCCGAGTCTGAAGCGAAAGTGCACGGACTATCTGCGCGACATCGAAAACCAGAAGAGACACAAGATCCTGCTGAACAACTCGAGCCGACCCGAGGTCAAGGCCAGACCCGACGACAGTCAGAAAGTGTACAATTGCCCTGTATGCGGTAGGAAGAACTTCGGAACCAGCCGGCTCCTGGAGAGTCACCTGGAGCGCTGCCACCCGGACTTCCCGCCGAACTGCGACCCCTGCGACCTGTCCTTCGGTAACTGCCGGGTGATGAACCTGCATCAATACGTGCTCCAGTACGAGGACCAACCGACCGGGAACACCACGAGGAACCTCCGCAACTCCGTGGTCGGTTTCAACGACCTGACCTTCGTCGACTTCTCCTCGGAAAAATTCCCAACGATCGCTCGGGCGGTCTGCGAGCAATCGGTTCATCGGCCTGCCTCGGGAGAGGTCGCCAAGTTCCAGTGCTCCAAGTGTCTGAGGGCGTTCCCCTGTAGATTAGCCTTGGACGCCCACGAAACCGATTGCGGCACGGTGAACGCTCCGACCAGGGTGATCAACGACAACCAGTCGAGAAGAGACGACTTCTTCGCCGGCCTGAACCTGCAGAACAAGGCTGCCATGACCGAGGCGAAAGAGGGCAAGGACCTGGCCGATATTCAGAGCATCATCTCCGTCACCTCCGGCCCCATCCTGCAGAACTTCCCCAGGTCGGACGCCAGCACTCCCGAGAACAACATCAAGTTCAACCTGAATCTTAGCTCTTCGGGCTCCTCCGGCACCTTCTCCACGGAGTCCCACGAAGAGGAAGCGCAGGACGCGTTCTCGGCTGAGTTCAGGAAGATGAAGCTGAAGGGTGAATTCCCCTGTAGACTGTGCACCGCGATCTTCCCGAACCTGAGAGCGCTGAAGGGCCACAACAGGGCGCACATGGGGGTCGGACCTGGACAGCCGTACCCTTGCAACATGTGTTCCTACACGAGCACGGACAAAGCGACCTTGGTCAGACACCTGAGGTCCCACAACGGCGATAGGCCTTACGAGTGCTCGTTGTGTAACTACGCGTTCACAACGAAAGCGAATTGCGAGCGACACGTGAGGAACAGGCACGGGAAGCTCACCAGAGAGGACATCAAGAGCGTTCTGATCTATCATCCGAACGAGGACTCGACAACCGACAACGCGGAGAGAAGCTCGCCCAGAGTGATAAAAGATGACCCAAGGAAATCTTTGATGTACCCTAACGAACGGGACGAGCTGCACCATCAGACGCAGATGCGTTATCCATCGGTACCGATGGAGGGCCGCAGCGAGATTAGGATCATCGAGGAGGCGAAGCTTCATAATTCGTTGTCCCTGCGCAACAGTCGCTACGAGAATGCCGAGGCGTTCCCGATGTCGAGCCACCAGCCGATGGAGTTAACGAAGAACGTGGACGATGGAAAGTCCGTAGACGTGAAGCAGGACTACGCGAAGCTCGAGGAGGACCAGGAGTCGAGGTCCTCGGCAGACAGCGTGTCTCTAGTCAGTGATACCAAATCCGAATCGCACCAAAGAATTCAAGCTAGTCCGATGAACCTGAAGAAGGCTCTGACGGTATCGGAGACTGTCGGCGAGGATGGTCCTCTGGATCTATCCATGGATGTTCTAGATCTCAGTAAGAAGACGAAGGAAAACGAGGATGGCAATTGCTCGGCCTCGCAAGATGGGTACGGAAAGAGCCAGAAGGAGATGTACGATGCTGTGAAAAGTCGACTATTGATCACCCAAGCCCTGCTGGCCAAGGCTGGCCAAGGGAACCCGCCGCCTTGTTCCCTGGACACGCTTTACGCGAATGCGCATCTGATTTACGGAAACTTTGGAGCGTTCCCCGGAACTGTAGGAGCGGGGATATTGCCACCGTACTTGTTCAACCCCCACGTGTTCGATCAGGACTTCGCCGTGAAAGACACAATCCAGAAGGAGTTGGTCAGGGGCCTGCAGCTGACCAGCGGCGGCACGTTGGTGGAGCCTCCGATCAGGACCACCGGGTACAACGCCTATCCTCAAGGAAGAGACATGAATCCGCAAACGGCGAACGAACAGAACGAGTACGCCAAGCTGATCACATCGAAGCTGACGGGTAAGGCGCTAGCAAATCGAGATAAACCCGAGAACCACATACCCTCGTCGAACACTGTGAAAATGGTGATAAAAAACGGCGTGCTGATGCCCAAACAGAAGCAGAGACGGTACAGAACTGAGAGACCTTTCACTTGCGGACATTGCTCCGCGAAATTCACCTTGCGGAGCAACATGGAGAGACACATTAAACAGCAGCATCCTCAGTTCTGGAGCCAAAGACCCAGAGGAGGGCACTCGACCAGGGGAAGACCTCCTTCGAGCCATCTGACTTTGTTGCAGAGTTTGGAGCAATCGGCGGCCCAGTTGACCCAGTCGTATTCTACCATCCTGCCCAAGGCGGATCAATCGAGCGGAGAATACCCCGCGAAGCACCCTATATCCGATCAGGTCAAGTATGCGATCTTGGCGCAGCAGCTCAAGGCGAACAAGATCGAGGACAACGAACATTCCGAGGAGGAGCTGGTGATCGACGAGGGTCCGCAGGAGAAGGAGCAGGAATCTCAGAAGGAGAAGTGCACCAGTTTGTTGAGGGGCCAGTTAGAAGGATCAGAGGTTGCGAAAGAGATAAAAGAAGATGCCGAGAAATGCGTTAAAGAGGACACGACCGATAGACCCGAGTCTACGAACAGCAACAACGAGAACGAGAACGAGAACGAGAACGAGAAAGAGGACGAGGAGAAGATGGACGCGGCGGAGCCGTCGATGACGGAGATGAACGAGTCGAGCGATAAGAAAACGATCAAGCCTGAACAGGAGGAAGAGAGGTCGGAGAAGGCTGAAGACGGTGCGACTGATTTGGCCAGCGTGTCGGAATTGTTGGACAATGCCTCGCAGCAATACCAGCAGTTCCAACCTCAGTATCTGAGCGACGAAGAAGGATTGGTCGCATCGAACAGCGACTGCAACAACTCCGGCAGCGACGAAAAGTCGGACTCCGTGAACTCGTTGAACTCCGAGAGTCCCTCGTCCAAGAAGAAGAAGAAAAAAATGAAGAAGAAGTCCGCGTACTCGATGGCTCCGAACCGAGTGATCTGTCCGTACTGCGAGAGGCCGTTCCCCTGGACATCGTCTCTAAGAAGACATATTCTGACGCACACCGGACAGAAACCGTACCAGTGCATGCACTGTTCGCTGCTCTTCACCACTAAGTCGAACTGCGACCGCCATTTGCTGAGAAAGCACAAGGCGAACCCGAACAAGATCCGCAGGGTCCGAAACTCCTCGTCGCCGGACAGCCAAGCGGCGATCAGCAACAGCAACTCCTTTTCGATGAGGAACGTGCCCGAAAGGCCGTACAAGTGCAATCAATGCCCCAGCTCGACCTTCTCCACTTTAGGCAACCTGAAGAAGCATCGCTCGACGAAGCACGCGCGAAAGGTCAAGTCCAGGTCCGACACCCCGTCCAGCGAACCTCAGAACAGTCCTCAAGAATGCTCGAAACAGAACGAACAGACCGATTACGACAGCCAGTCGTCCAGCGTCTCCGAAAGCATGGAGATCGCTTCGGTGTCGGGACTACCAAAGACGAACTTGAACACCTTGCCGTCCACCAATGATGCGGCCAGGTCCAGAAGACCTTCTCCGAGGTCATCGCCTGGACCGAGCGACGTCCCGTTCAAGTGTCACCTGTGCGACTGCGGATTCTCCGACAGGCAGGATTGTCTGGAGCACATCAAAGTAAATCATAAAAGGTCGTACGAGATGCTGGTGGCTAAGGGAGCCCTGGACATGGATATCGACACCGTGGAGGACCAGCAACAGCCGCCTCCTTCTCAGCATCACAGCGATGGCGAAGAGAAGAGAGGCCGATTCCCGGACTACAGCAATAGAAAGGTGGTCTGCGCTTTCTGTATGAGGCGCTTCTGGTCTGCGGAGGACCTACGTCGACACATGAGGACGCACACCGGCGAGAGACCGTTTTCCTGCGACATCTGCTGCAGGAGATTCACGCTGAAACACAGCATGCTGCGACACAGGAAGAAGCACGAGTCGGTGGACTCGACGATGTACGTAGGCACCAGCGGGGACGAAGAGAACGCGCCGACACAACCGCCTACCATCGCGCCGAGGAGTCAACAGCAACAATCGCCGGTTCTGGTAGCTACAAACTCTGGAAACCCTAGGATACCGGATAGAATATCGTTGCCAAACATGGCACCGGTTGTAACAGGGGATGCCGCGCCTAGCGGGCTCGTGCGTTTCCATCCCTACGAGAAACTGACAACTTTGACGGGTAAGCTGGCTAGTATTCCGCAAAACGCGAATCCCGAAGCCAGCGAGAACACCGACAACGACCTAATCTCGAATCTATTGGGGATTAGGGATAAGACCTTTATAGACAGAGTGCTTCAAGCGACCGCCGACGACGCAGCCAAACTTCTCGGGGTGAAACACAGCCACGAGTGA
Protein Sequence: MNKVTCRAVTVKSSPDQGRDNEAQVDAASPLSSVELPESAHPCPACPTVLPSCRELTHHLRDHNSPRSTDCSVEDDFSCGVCNKVLSSASSLDRHVLVHSGERPFKCKFCEMAFTTNGNMNRHLRTAHCSTSSLSCTDSEVSCDSEKLSKRNIEEYNNNEIAKRKSPDLIDQDQEKSPSLKRKCTDYLRDIENQKRHKILLNNSSRPEVKARPDDSQKVYNCPVCGRKNFGTSRLLESHLERCHPDFPPNCDPCDLSFGNCRVMNLHQYVLQYEDQPTGNTTRNLRNSVVGFNDLTFVDFSSEKFPTIARAVCEQSVHRPASGEVAKFQCSKCLRAFPCRLALDAHETDCGTVNAPTRVINDNQSRRDDFFAGLNLQNKAAMTEAKEGKDLADIQSIISVTSGPILQNFPRSDASTPENNIKFNLNLSSSGSSGTFSTESHEEEAQDAFSAEFRKMKLKGEFPCRLCTAIFPNLRALKGHNRAHMGVGPGQPYPCNMCSYTSTDKATLVRHLRSHNGDRPYECSLCNYAFTTKANCERHVRNRHGKLTREDIKSVLIYHPNEDSTTDNAERSSPRVIKDDPRKSLMYPNERDELHHQTQMRYPSVPMEGRSEIRIIEEAKLHNSLSLRNSRYENAEAFPMSSHQPMELTKNVDDGKSVDVKQDYAKLEEDQESRSSADSVSLVSDTKSESHQRIQASPMNLKKALTVSETVGEDGPLDLSMDVLDLSKKTKENEDGNCSASQDGYGKSQKEMYDAVKSRLLITQALLAKAGQGNPPPCSLDTLYANAHLIYGNFGAFPGTVGAGILPPYLFNPHVFDQDFAVKDTIQKELVRGLQLTSGGTLVEPPIRTTGYNAYPQGRDMNPQTANEQNEYAKLITSKLTGKALANRDKPENHIPSSNTVKMVIKNGVLMPKQKQRRYRTERPFTCGHCSAKFTLRSNMERHIKQQHPQFWSQRPRGGHSTRGRPPSSHLTLLQSLEQSAAQLTQSYSTILPKADQSSGEYPAKHPISDQVKYAILAQQLKANKIEDNEHSEEELVIDEGPQEKEQESQKEKCTSLLRGQLEGSEVAKEIKEDAEKCVKEDTTDRPESTNSNNENENENENEKEDEEKMDAAEPSMTEMNESSDKKTIKPEQEEERSEKAEDGATDLASVSELLDNASQQYQQFQPQYLSDEEGLVASNSDCNNSGSDEKSDSVNSLNSESPSSKKKKKKMKKKSAYSMAPNRVICPYCERPFPWTSSLRRHILTHTGQKPYQCMHCSLLFTTKSNCDRHLLRKHKANPNKIRRVRNSSSPDSQAAISNSNSFSMRNVPERPYKCNQCPSSTFSTLGNLKKHRSTKHARKVKSRSDTPSSEPQNSPQECSKQNEQTDYDSQSSSVSESMEIASVSGLPKTNLNTLPSTNDAARSRRPSPRSSPGPSDVPFKCHLCDCGFSDRQDCLEHIKVNHKRSYEMLVAKGALDMDIDTVEDQQQPPPSQHHSDGEEKRGRFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICCRRFTLKHSMLRHRKKHESVDSTMYVGTSGDEENAPTQPPTIAPRSQQQQSPVLVATNSGNPRIPDRISLPNMAPVVTGDAAPSGLVRFHPYEKLTTLTGKLASIPQNANPEASENTDNDLISNLLGIRDKTFIDRVLQATADDAAKLLGVKHSHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00866229;
90% Identity: iTF_00860633;
80% Identity: -