Lpau009493.1
Basic Information
- Insect
- Lasioglossum pauxillum
- Gene Symbol
- bab1
- Assembly
- GCA_028455745.1
- Location
- CM052310.1:4569646-4572509[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.2e-13 7e-10 39.0 0.1 3 45 350 392 348 392 0.91
Sequence Information
- Coding Sequence
- ATGGCGAGCACGTcgcaacaatattgcctgcgttggaacaaccaccgttccaatctgctgacggtgttcgacgagctgctgcagaacgaggcgttcaccgatgtgaccctggcggtggacggcggtgcttcggtcaagtgtcacaagatggtgttggccgcctgttcctcctactttcaaaggttattcatcgacctgccgtgcaagcatccgatcgtcgtcctgaaggacgtgaaatactcggagatcaaggcgatcctcgagtacatgtaccgaggcgaggtgaacgtagcgcaggagcaactggcaggtcttctcaaggtcgccgaggtgctcaaggtcaagggtctCGTGGAGGAGAACGGTTCCTCCTCTCAAGGTCGCCGCGAGGAGGTAGAGACCTCGATGTCTCCTCCGCCGGCGATCAGCACGAGCACAACCAGCAGCGCGGCTCACAGCAGCGGCCACACGTCGCCGCCGCACTCCACTGGCTCCTCGTACACCGTCTACGGGAAATCGTCGTTAGACAGGGTCCCGAATCGACTCCCTATGCACATGTGGCCCCTCGCAGGGATTCCTATTTCCGCTCACACCGGCTCGAACCACCAGGTAGCGCCGCCGCATCTTTCTCAACACTCGATTCTGACCGGCTCCTACGACAACGGCTTCGAAACCTCCCCGCTCAAACGAAAAAAGCTCTCGAACATGCTGATGAACAGGGACACGCCGATCCTGAGGACGGTACTCGGCCAGGGACACGCAGACAGCTCGCAAGGCATACCTCTGTTGCACCCGGACAGTCACGAGAACAATCACTTCAGGACCACGAGCAGCAACGGCTCGTCCAACGATAACGACAGACGCAACAGCCAGGACATCTCGACTCAGGGGGAGCCCGCGCACAGCCCTTACACGGACGTGTCAATGATGGACGAGGACGATAAGCAACCCCTGCCGCAGTCCTATCCCGGGGACGTTAAATCAGGAATCGTGAATTGCGTTCCAACGCAGAAGCCCGAGTGGAAACGGTACAAGCAGTACACGCGGAACGACATCATGTCCGCGATCGAGGCGGTGCGTTCGGGGTTGACGGCGTTGCAGGCAGCACGTAAGTACGGCGTACCATCTCGAACCCTTTACGACAAGGTGAAGAAACTCGGGATCAAAACGTCGCGGCCGTTCAAACGCGGCTCGAATGGTAGCGGCGCCTGTTTCCCGTACGGGATCGGCGGCAACGTGAACGGCAGCATATACGGCGGCGCGTTGTCCGAGAACGAGAACGAGAACAGCAACGCGGTCCTCGAGAATCCAGGTTCGATCCTGGACACTTACAAAGCCAGGGAGGGTCCCATCGATCGTGAGATGTTAGATATCACCCGGTGTAGTCCCAGCCCCGTTATACACTCCGCGAAACAGCAACAGCAAATCAACGAAGACCAGGTCGAGGATCTTTCCGTGGGTCGTAAGTCCGTGTCGGATGTTCGCGTGATAGTCCCACCGCCAACGTCGCACATCAAAGAGGAGGACGACGTTGGCTCCGATTCCTGTAACCATAACTAA
- Protein Sequence
- MASTSQQYCLRWNNHRSNLLTVFDELLQNEAFTDVTLAVDGGASVKCHKMVLAACSSYFQRLFIDLPCKHPIVVLKDVKYSEIKAILEYMYRGEVNVAQEQLAGLLKVAEVLKVKGLVEENGSSSQGRREEVETSMSPPPAISTSTTSSAAHSSGHTSPPHSTGSSYTVYGKSSLDRVPNRLPMHMWPLAGIPISAHTGSNHQVAPPHLSQHSILTGSYDNGFETSPLKRKKLSNMLMNRDTPILRTVLGQGHADSSQGIPLLHPDSHENNHFRTTSSNGSSNDNDRRNSQDISTQGEPAHSPYTDVSMMDEDDKQPLPQSYPGDVKSGIVNCVPTQKPEWKRYKQYTRNDIMSAIEAVRSGLTALQAARKYGVPSRTLYDKVKKLGIKTSRPFKRGSNGSGACFPYGIGGNVNGSIYGGALSENENENSNAVLENPGSILDTYKAREGPIDREMLDITRCSPSPVIHSAKQQQQINEDQVEDLSVGRKSVSDVRVIVPPPTSHIKEEDDVGSDSCNHN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01071088;
- 90% Identity
- iTF_00864729;
- 80% Identity
- iTF_00865418;