Lpau016839.1
Basic Information
- Insect
- Lasioglossum pauxillum
- Gene Symbol
- Bgb
- Assembly
- GCA_028455745.1
- Location
- CM052305.1:22677770-22690107[+]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-77 3.9e-73 245.1 0.1 2 161 40 196 39 200 0.97
Sequence Information
- Coding Sequence
- ATGATGCACACTATGAGCGAACACGCCGGAGGAGCCGGGGGCCTCGGTGTCAGCGTTTTGCCATTCGACGGAATGGGCCTGTACGAACAGCGCCGGCCCAGGTACGTCTTCAAGGTGCCCAAAGTGGTCCCCGATCAAAAGGGAAAGTTTGAGACCGACGAGCTCTTCAGGAGACTCAGCAGGGAAAGCGAGGTCAGATACACCGGTTTCCGGGACAGGCCGATCGAGGAACGCCGGGTACGGTTTCAAAATGGCTGCCGGGAGGGTCTCTGTGAGATCGCTTTCGCAGCGACCGGCACCAATCTGCAACTGGCTTTTGGGAGGGCCTCCGGGAACTACGCGGTGGATCCAAGCGACTGCGACTTCGAGAAAGACTGCGGCAAAGTGCACCTGAGGGCGCAGATGATAATGAACGGCGTCTGCGTGTTGTGGCGAGGTTGGATCGACCTGGAGAGGCTCGACGGGGTCGGCTGTCTCGAATTCGATGAGAAACGGGCCGCGGAAGAGGACGCTATCCTCCGGGACCAGGTCGAGCGCTATAGTCAGCGGCAACGAGACTTGGACGAGAAACAACGAGCTTACAGAACCGGAGCACCCCATTTGAACCACCACCACCACCATCATCACCATCACCACGGACACGGCCACCAGTATAACGCGATTGGGACGCAACAAACATAA
- Protein Sequence
- MMHTMSEHAGGAGGLGVSVLPFDGMGLYEQRRPRYVFKVPKVVPDQKGKFETDELFRRLSRESEVRYTGFRDRPIEERRVRFQNGCREGLCEIAFAATGTNLQLAFGRASGNYAVDPSDCDFEKDCGKVHLRAQMIMNGVCVLWRGWIDLERLDGVGCLEFDEKRAAEEDAILRDQVERYSQRQRDLDEKQRAYRTGAPHLNHHHHHHHHHHGHGHQYNAIGTQQT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01394046;
- 90% Identity
- iTF_00863046; iTF_00866476; iTF_00863726; iTF_00865779; iTF_00861653; iTF_00864408; iTF_00860154; iTF_00862333; iTF_00965822; iTF_00860895;
- 80% Identity
- iTF_00863046; iTF_00864408; iTF_00860154; iTF_00860895;