Loen009960.1
Basic Information
- Insect
- Lasioglossum oenotherae
- Gene Symbol
- retn
- Assembly
- GCA_028455765.1
- Location
- CM052283.1:1293401-1296067[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-14 2.7e-11 43.8 0.0 15 79 121 183 114 184 0.91
Sequence Information
- Coding Sequence
- ATGCTCGTAAAGCGGACGTTTACGCACACGCAGCAGAACCGCGAGATAGCCCCGCGCGTTGTTGTTGCGTCCGCTACTCCTGTTAACACCCCGTTAACGCGAATCCCGAACGGCCTCGTAAAATTCGACGACGCCGTGCCGAGCTACATATGTCCGGTCGCCACACCGATGAAATCCGAAGGAGTTATTGGAATCGGTTGCCGGACACCCCCGCAACACATTCCTCCTCCCGATCGTAAAGCCGAGATTTCCTGTCATCCCTTGACCTTCGCGCAACCCCTTATGGTCCTCGTTATTCGGGACTTTCTGGGCGTGAACCTTCTGCCTCTGGTTTGTCCACTGCAGCCTCCCTTGGCAACACCGCGCAGGACACCGATCAATCGGCTGCCGATCATGGCGAAATCGGTGCTGGATCTGTACGAGCTGTACAACCTGGTGATCGCTCGAGGCGGGCTGGTCGACGTAATTAACAAGAAGCTCTGGCAGGAAATCATCAAAGGTCTCCACCTGCCATCGAGCATCACTTCCGCCGCGTTCACTCTGCGCACTCAGTAA
- Protein Sequence
- MLVKRTFTHTQQNREIAPRVVVASATPVNTPLTRIPNGLVKFDDAVPSYICPVATPMKSEGVIGIGCRTPPQHIPPPDRKAEISCHPLTFAQPLMVLVIRDFLGVNLLPLVCPLQPPLATPRRTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00863750;
- 90% Identity
- -
- 80% Identity
- -