Lmar018901.1
Basic Information
- Insect
- Lasioglossum marginatum
- Gene Symbol
- retn
- Assembly
- GCA_028455795.1
- Location
- CM052260.1:4023680-4025926[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2e-14 4.7e-11 43.1 0.0 17 79 109 169 96 170 0.88
Sequence Information
- Coding Sequence
- ATGCTCGTAAAGCGGACGTTTACGCACACGCAGCAGAACCGCGAGATAGCCCCGCGCGTTGTTGTTGCGTCCGCTACTCCTGTTAACACCCCGTTAACGCGAATCCCGAACGGCCTCGTAAAATTCGACGACGCCGTGCCGAGCTACATGTGTCCGGTCGCCACGCCGATGAAATCCGAAGGAGTTATTGGAATCGGTTGCCGGACACCCCCGCAACACGTTTCTCCTCCCGATCGTAAAGCCGAGATTTCCTGTCATCCCTTGACCTTCGCGCAACCCCTTATGGTCCTCATTATTCGGGACTTTCTGGGCGTCACCTCTCTGCGGACACCGATCAATCGGCTGCCGATCATGGCGAAATCGGTGCTGGATCTGTACGAGCTGTACAACCTGGTGATCGCTCGAGGCGGGTTGGTCGACGTAATTAACAAGAAGCTCTGGCAGGAAATCATCAAAGGTCTCCACCTGCCATCGAGCATCACTTCCGCCGCGTTCACTCTGCGCACCCAGTAA
- Protein Sequence
- MLVKRTFTHTQQNREIAPRVVVASATPVNTPLTRIPNGLVKFDDAVPSYMCPVATPMKSEGVIGIGCRTPPQHVSPPDRKAEISCHPLTFAQPLMVLIIRDFLGVTSLRTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00864430;
- 90% Identity
- -
- 80% Identity
- -