Lmar017636.1
Basic Information
- Insect
- Lasioglossum marginatum
- Gene Symbol
- dmrt1_1
- Assembly
- GCA_028455795.1
- Location
- CM052276.1:1127075-1129656[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9e-19 1.2e-15 57.3 15.3 2 47 29 74 28 74 0.97 2 2 1.3 5.6e+03 -2.5 0.0 20 26 166 172 163 174 0.71
Sequence Information
- Coding Sequence
- ATGGAAAATAAGGACAAGGTCCTTACTACGCGGACGGAAACGAACGCATCCTCGTCCTCGACGACAACCCTGGGTAAACGGTCATCGCCTTGTTGCGCACAATGTCGCAATCACCAATTGCAAATCCCCGTTAAGGACCACAAGAGGTACTGCAAGTATCGCAACTGCAAGTGCCCTGGATGCAGGGATACCGCAGAAAGGCGACGGGTGATGGCGAGGCAGACCATGCGGAGAAGAGCCCAGGAGCAGGACCGGACGAAGAAAAAGGCTGTCGGTGAGGATGATCCACTGCCGTTTGGGATGGTGGAGAGTGATCAGCTTTCCGCTGTTATTGAGCCAGCCAGAAGCTTGGAGGGCAACTACGACAGTAGCAGCGGCGACTCACCGATCAGCAATCACGGCGGAAACGGTGTGCACACCGGTTTAGGCGGTGCCATCACAATCCCGACCTCGAGGAAAGTGACATCGTCGCATCCACTCACTGGAGCATCCAGCCATTTGCCGCAGTGCCAGTTCGTTAAAATAGCTCCGACTGCAAAGGATTAA
- Protein Sequence
- MENKDKVLTTRTETNASSSSTTTLGKRSSPCCAQCRNHQLQIPVKDHKRYCKYRNCKCPGCRDTAERRRVMARQTMRRRAQEQDRTKKKAVGEDDPLPFGMVESDQLSAVIEPARSLEGNYDSSSGDSPISNHGGNGVHTGLGGAITIPTSRKVTSSHPLTGASSHLPQCQFVKIAPTAKD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -