Lmar007739.1
Basic Information
- Insect
- Lasioglossum marginatum
- Gene Symbol
- dmd-4
- Assembly
- GCA_028455795.1
- Location
- CM052277.1:4959930-4963226[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.4e-26 2.3e-22 78.8 10.3 1 47 23 69 23 69 0.99 2 2 0.45 1.9e+03 -0.9 0.3 2 8 349 355 348 357 0.79
Sequence Information
- Coding Sequence
- ATGCTGCGAGGGAAGAGTAGAAGCAAGCCGGAGAACGAGGACGAAGAAGATGGCCAGACTAAACAGAGGAGGCCGAAGTGTGCACGTTGCCGGAACCACGGGCTTATCTCGTGGCTTAGGGGACACAAGAGGGAATGCCGATACCGGGACTGTCTTTGCCCTAAGTGCTCTTTGATTGCAGAGAGGCAGAGAGTAATGGCAGCGCAGGTGGCACTGAAGAGGCAACAGGCAGCCGAGGACGCCATCGCCCTGAAAATGGCTAAGGTGGCGACTGGACAGAAGCTGAACCGGCTACCACCAGGCAAGATCTTCGGCATGGCGATCACCGAGCCGAAGTCATCCACAGACAGCGAGAAACAAGGACAATCATCGCCTGAAGAAGGTCAGCCGGCGTCCGAGGACCAGAAGAAGGAGGTCTCCAAGATCCAAGGTCAAGAATCTTCTACGGTCGGCGAGAACCTGGCGAAGCTGAAGAGTCTGGTGTTCAACGGCGGCAAGCAAGAGGAGTCGAAAGAGAGCAGCGTGTCTCAGACCTCGGTGGACACTCTGGCCCGGTTGTTTCCCAACACGAAGCTGTCGGTGCTGCAACTGGTGTTGCAGAGGTGCGGCCAGGACCTGTTGAAGGCGATAGAGTACTTCGCCAGCGACAGCCTTGGCATCGGTTCAACCGCCTACACGTCGGCCTTCCGGCCTCCCAGTCAAAGTATCAATGAAAGCCGACCGAGCGACCAACTGAGCGGCTCCATGCTAGCCCCCATCTATTCCAATCTCTCCAGAAGCCTCTACAGCGACAGTTATTGCGTGCTGAACATCATCCCCGATCAATTCCCGAAAAGCATCGTGGCGGACGCTGCCACCTGTACAGCTTTGCCCAAGCATGATCAAGACAGCGTTGCTCTGAATGTTCAGTACAACAGCTACTTCAATGCTGGCCTGCAACAACAGATAAGGGATCACGTGTACGCCCAGGTTACTGAACACCTTCCGTCCAGACCGGGGTTCCTTCATCTACCACCTATCATGCCTGGGATGCCTGCTTGCGTACAGCCTAACTGCACCCAGTGCGCCTACAAGTTCCCGTAA
- Protein Sequence
- MLRGKSRSKPENEDEEDGQTKQRRPKCARCRNHGLISWLRGHKRECRYRDCLCPKCSLIAERQRVMAAQVALKRQQAAEDAIALKMAKVATGQKLNRLPPGKIFGMAITEPKSSTDSEKQGQSSPEEGQPASEDQKKEVSKIQGQESSTVGENLAKLKSLVFNGGKQEESKESSVSQTSVDTLARLFPNTKLSVLQLVLQRCGQDLLKAIEYFASDSLGIGSTAYTSAFRPPSQSINESRPSDQLSGSMLAPIYSNLSRSLYSDSYCVLNIIPDQFPKSIVADAATCTALPKHDQDSVALNVQYNSYFNAGLQQQIRDHVYAQVTEHLPSRPGFLHLPPIMPGMPACVQPNCTQCAYKFP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00183966;
- 90% Identity
- iTF_00861897;
- 80% Identity
- -