Lmar005881.1
Basic Information
- Insect
- Lasioglossum marginatum
- Gene Symbol
- Mblk-1
- Assembly
- GCA_028455795.1
- Location
- CM052244.1:241704-248281[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.5e-18 6.2e-15 54.8 0.1 1 45 51 96 51 96 0.96 2 2 1.4e-18 1.9e-15 56.5 0.0 1 43 506 549 506 551 0.95
Sequence Information
- Coding Sequence
- ATGGATAGTGAGGTGGCAAATGGGGTGTGTTGCAGTTCGTGTTACCGCGCGAAACCGCGGGTCGGGCCGGTGGCTGTGACGGCGGCAGCAGCTGCGGCAGGCGTCGGTGGTGTCCCCGTGGTGGGTGCCGGGGGTGGCCGGAGGGCCTACACTGAGGAGGAGCTGCAGGCCGCCCTCAGGGACATCCAGAGCGGCAAGCTCGGCACAAGAAGGGCGGCGGTCATCTACGGAATACCGCGTAGCACCCTGCGCAACAAGGTCTACAAGCTTGCGATGGAGCGCGAAAGGGACGCGTCCCTGACTAGCACCCACTCACACCCTCACGAGCCCGGCGCCCCAGCCACCACCACCACCACCATCACCACCACCACCACAACTACTACTACTACTACAACAACACCACCAAATACGACCCAAAACGCCTCCGCGACCACTCCGCCCCCGCAAGTGGACGAGTTTAACACACGGCCGGTCGGTCTTGGCGAGGTTGCAAGACTCGAGGTGGACGACAAGGAACTATCCGGGGCGGAAGAGGAGAAAGAAGTCGAGAAGGCGCTGCTGAAGCCGTTGTTGTCTTTCGAAGATCTTGTCAGGTTCTCCGCCCTCGAAGGTGGCGGCGGGGACTCTCTGAGGAGTCTGTTGCAACGGGGACAGGAAACAGGAACGGAGTGGCCAGGCCTGGAACACGCGAACATCGGCCCGTACATTCAGAAGATGCTCGCGGCGGCTGCACCGTTCAAAGGCATGGAGACGCAGGACTACCGTATCCCGGAGGTGATGAGGCGGCTGATGAGCGAGGACAAGAGGCTAAACAAGAGCGTAAACGGGGACCAGTCGCAGCCATGTCACCAGCAGTTTCATCACCAGCAGCAGTCGCACACGCAGCACTCGTCGCACTCGCAGGCCTCAGGCGGTACGGCGTCGCAGACGCAACAACAACAGCAGCAACAGCAACGGGGTCCGATCACGAACGACGACTTCAACCCGAACATCGAGGAGGAGGCGAGCGACAGCGCCCAGGGCCGAGCGATTCTAAAGATTCCGTCCTACAAGCCCGCGAGCACGCCGGGCTGCTCGAGCAAGAACGGCGAACCGACCTCCGCGGCGTTCGCGCAGGGATTCGCCACCGCTGCCTCCAGTCCGGGCCTCCTCGAGAGAGCGAGCCCGGCGTTCTCCGGCACCAGCAGCCCGACCAACTCGCTCGTGGGGAAGACGGTGGCCGTCAACTTCCGCGACGTGATCGCCAAGAGCATCAGCGTTAAGTTCCAGGAGGGCCAGCAGGTGCCGGCGGCCGCCGGACTCACCGGCTGCCAGCCGGGCGGTGTCGTACAGTCCCAGCAGACGATCATGACGGACCCGAGTCCGTTCAAACGGGGCCGGTACACGCCGCCGCAGCCCTCCACGCAACAGTCCCAGTCGCAACCCAAGCCCCAGCAGTCCCAGGACGCGAACAAACCGAAACCAGCCACCGGCGGCAAGGGAACCAGACCGAAGCGCGGCAAGTACCGAAACTACGACAGGGACAGCCTGGTCGAGGCCGTCAGGGCCGTGCAGCGCGGCGAAATGAGCGTGCATCGCGCGGGCAGCTACTACGGAGTACCACACTCCACCCTCGAGTACAAAGTCAAGGAACGACACCTCATGAGGCCAAGGAAGAGGGACCAGAAGCAGACGGACGATAAGACGAAGGAGACGGCGGTGGCGACGGGAGCGGCCGCGAACATGCGGCCCGGCACCGCGGACAAGAAGCCGCAACTGAAGCCGCAGAAGCCGTTCACGCCGCCGGCGGGTATCGCGGGACCGAACGGGCTGAAGATGCCGCCGTTCATGGAGGGCATGCCTCACTTGCCGTTCGGGCCGTTCAACTTTTGGAACCCGACGCCGTTCATGCCGTCGCCGTTCATGGCCGGGGCGCCGAACGTTCCGACGATCCTGCCGGAGCAGTACTTCGCGACGAGCAGGATGCGTGGGctgcaggaacagcagaggagcgcggcgatggtgcaacagcagcagcagcaacaacaacaacagcaacagcatccacaGAGGGATAGGGACGGTATCGGCGCGTCGACAGCGACGACGGAGTCGTCGCCGGGAACCTCGAACTCCCGGGGCACGCCGATGTCGAAGGCGGCTCGCGAGGCCACCGAGGGTTTGTACGACGGCTCGGCTGCGAACGGCAGTTTCCTGGACAGCCTGATCAGGTCTAGTCTGGAGACGGGAATCCCAAGGGACCAGAGGGCGATCACCGAGACGAGGGGCAGCCAGCCTGCGTCGTCCTCGCAGCAACAGCTCCCGGAGACGATGAGGAGTAAAGCGTTGATCGACCAGTTGTGCCGAAACTCTAGGAGAACGCCGGTGCCTCGGCTGGCTCAGGACAGCAGCGAGGACGAGAGCTACAGGGGACCATCGGCGGCGGGAAGACCAGTCCCGGAGAGGCCGGAACGCGTGCCCACCGTCGACCTGAGCCCGTCACCGTCGGACAGGTGTCGCGTTGACGACGCCACTGACCGGCTCGCCTCACCGCCAACGCCTCTCTCGGTCTCGAGGGCCGGGAGTAGGGACGAGGACAGTGTTCGCGACTCGAGGGCCGATCGCAGCAGCAGGGAGCGCGAGGTCCACAACGGCGGACAGGAGGATCGCGATCGGAAGCCTCTGGCGAGCGGCGGCGGTCAGCAACAGCAGTCGTCGTCGTCTGCGTCGCAGCAATCGTCGCAACAGCAGCCGTCGTCGCAGTCGCAGCTGAATCACTACCCGGACTTGCTCTACGCCGTATCAACTGACAAAAAAAGTGCCTGTGATAGTAAGCTTATAGTAGATCATTCGAGCCAGAAGActcagcaacaacagcagcagcaacaacaacagcagcagcaacctgcgcaacagaaagagtttgcTGCGGTGAGCGGACTGGTTGTGCAACTGCAGCGGGGCTACAACTCCGGGAGCAACAGATCCGGCGAGCAGACCAACAACCAGCAGTCGGCCGAGCAACGCGGCCCCGTCATCGGTATGGAAGACACCGTCGAGCAGTAG
- Protein Sequence
- MDSEVANGVCCSSCYRAKPRVGPVAVTAAAAAAGVGGVPVVGAGGGRRAYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERDASLTSTHSHPHEPGAPATTTTTITTTTTTTTTTTTTPPNTTQNASATTPPPQVDEFNTRPVGLGEVARLEVDDKELSGAEEEKEVEKALLKPLLSFEDLVRFSALEGGGGDSLRSLLQRGQETGTEWPGLEHANIGPYIQKMLAAAAPFKGMETQDYRIPEVMRRLMSEDKRLNKSVNGDQSQPCHQQFHHQQQSHTQHSSHSQASGGTASQTQQQQQQQQRGPITNDDFNPNIEEEASDSAQGRAILKIPSYKPASTPGCSSKNGEPTSAAFAQGFATAASSPGLLERASPAFSGTSSPTNSLVGKTVAVNFRDVIAKSISVKFQEGQQVPAAAGLTGCQPGGVVQSQQTIMTDPSPFKRGRYTPPQPSTQQSQSQPKPQQSQDANKPKPATGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDQKQTDDKTKETAVATGAAANMRPGTADKKPQLKPQKPFTPPAGIAGPNGLKMPPFMEGMPHLPFGPFNFWNPTPFMPSPFMAGAPNVPTILPEQYFATSRMRGLQEQQRSAAMVQQQQQQQQQQQQHPQRDRDGIGASTATTESSPGTSNSRGTPMSKAAREATEGLYDGSAANGSFLDSLIRSSLETGIPRDQRAITETRGSQPASSSQQQLPETMRSKALIDQLCRNSRRTPVPRLAQDSSEDESYRGPSAAGRPVPERPERVPTVDLSPSPSDRCRVDDATDRLASPPTPLSVSRAGSRDEDSVRDSRADRSSREREVHNGGQEDRDRKPLASGGGQQQQSSSSASQQSSQQQPSSQSQLNHYPDLLYAVSTDKKSACDSKLIVDHSSQKTQQQQQQQQQQQQQPAQQKEFAAVSGLVVQLQRGYNSGSNRSGEQTNNQQSAEQRGPVIGMEDTVEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00864554; iTF_00088695; iTF_00084444; iTF_00024537;
- 90% Identity
- iTF_00864554;
- 80% Identity
- -