Atri018972.1
Basic Information
- Insect
- Andrena trimmerana
- Gene Symbol
- Mblk-1_1
- Assembly
- GCA_952773225.1
- Location
- OX731551.1:3063630-3069379[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-17 7.3e-15 54.9 0.1 1 45 33 78 33 78 0.96 2 2 3.3e-18 2.2e-15 56.6 0.0 1 43 481 524 481 526 0.95
Sequence Information
- Coding Sequence
- ATGACCGGGCCGGTAGCGGCTGTGGCGGCGGCAGCAGCTGCGGCAGGCGTCGGTGGTGTCCCCGTGGTGGGTGCCGGGGGTGGCCGGAGGGCCTACACCGAGGAGGAGCTGCAGGCCGCCCTCAGGGATATCCAGAGCGGCAAGCTTGGCACACGAAGGGCGGCCGTGATCTACGGAATACCGCGTAGCACCCTACGCAACAAGGTCTACAAGCTTGCGATGGAGCGCGAAAGGGATGCGTCCCTGAGTAGCACCCACTCACACCCTCACGAGCCCGGCGCCCCAGCCACCACCACCACgaccatcaccaccaccaccaccaccaccactactactactactacaacacCACCAAATACGACCCAAAACGCCTCCGCGACCACTCCGCCCCCGCAAGTGGATGAGTTTAACACACGGCCACTTGGTCTTGGCGAGGTTGCAAGACTCGAGGTCGACGACAAGGAACTGTCCGGAGCGGAAGAGGAGAAAGAAGTGGAGAAAGCGCTACTGAAGCCGCTGTTGTCCTTGGAAGATCTGGTGAGGTTCTCCGCCCTCGAAGGTAGCGGCGGAGATTCCCTGAGAACTCTGCTTCAGCGAGGACAGGAGACGGGGACCGAGTGGCCTGGTCTCGAACACGCAAATATCGGTCCGTACATACAAAAGATGCTTGCAGCGGCTGCACCCTTCAAAGGTATGGAGACGCAAGACTATCGCATTCCAGAAGTGATGAGAAGGCTGATGAGCGAGGACAAGAGGCTAAACAAAAGCGTGAACGGGGACCAGTCGCAGCCGCACCACCAGCAGTTACATCACCAGCAGTCCCACTCGATGCATCCCCAGACGCAGACCCAGCAACAGCAACGCGGTCCGATCACCAACGACGACTTCAATCCGAACATCGAGGAGGAGGCGAGCGACAGCGCCCAAGGCAGAGCGATCCTGAAGATTCCGTCCTACAAGCCTGCGAGCACACCGGGATGCTCGAGCAAGAACGGCGAACCAACTTCGGCCGCATTCGCGCAGGGGTTCGCGGCTGCAGCTGCGGCTGCGGCCGCGGCCTCGGCGTCGAGTCCGGGTCTTCTGGAGCGAGCCAGCCCGGCGTTCTCCGGCACCAGTAGCCCGACCAATTCGCTCGTGGGGAAGACGGTGGCCGTCAACTTCCGCGACGTGATAGCGAAGAGCATCAGCGTGAAATTCCAAGAGGGCCAGCCGGTCGCCACGGCTGGAATGGCCGGATGCCAGAGCGCCGGTATGGTGCAGTCGCAGCAGACCATGGTGACGGACCCGAGCCCGTTCAAGAGAGGCCGATACACGCCGCCTCAGCCGGCCTCGCAGCACCAGCAGTCGCAGTCCAAGCCGCAGTCCCAGGATGCGAACAAAGCCAAGCCAGCCACCGGTGGCAAGGGGACAAGACCGAAACGCGGCAAATATAGAAACTACGACAGGGACAGCCTCGTCGAGGCTGTGCGGGCGGTCCAGCGGGGCGAGATGAGCGTGCACCGCGCAGGCAGCTATTACGGAGTACCGCACTCCACCCTCGAGTACAAAGTTAAGGAACGGCATCTGATGAGGCCGAGGAAGAGGGACCAGAAGCAGTCGGACGATAAGGCGAAAGAGACTGCGGCCACGGCTGCGGCGGTGGCGGCCGCGAACATGCGACCGGGTACAGCCGACAAGAAGCCGCAACTGAAGCCACAGAAACCGTTTACACCCCCGAGCGGCATACCAGGGCCGAACGGACTGAAGATGCCGCCGTTCATGGAGGGCATGGCTCACCTACCATTCGCGCCGTTCAACTTTTGGAACCCGACGCCGTTCATGCCGTCACCGTTCATGGCGGGGGCGCCGAACGTACCGACGATCCTGCCGGAGCAGTACTTCGCCACCAGTAGGATGCGGGGCTTGCAGGAGCAGCAGAGAAACGCGACGATGgtgcagcagcaacaacaacggGACAGGGACGGGATCGGTGTGGCCGCGACCACCACGGAGTCAGCCGGCTCGTCGAATTCTCGCGGCACGCCGATGACAAAGTCGTCGcgggaggtggcggacagcttGTACGACGGTTCGGGAGCGAACGGCAGTTTCTTGGACAGCTTGATCAGGTCGAGCCTCGAGACGGGAATACCAAGGGACCAGCGGACGATGACGGAGGCGAGGAGCCAACAGCAGTCCTCCTCCCAGCAGCAGCTTCCGGAATCGATGAGGAGTAAAGCGTTGATCGACCAGCTGTGCAGAAACTCGAGGCGAACGCCGGTGCCGCGGATGACTCAGGACAGCAGCGAGGACGAGAGTTACAGGGGACCATCGGCCGCGGGAAGGTCGGTCCCGGAGAGGCCGGAACGCGTGCCCACCGTGGACCTCAGCCCATCACCGTCGGAACGGGGCCGCGCCGACGACGGAAGCGACCGGCTCACCTCGCCGCCGACGCCTCTCTCGATCTCGAGAACCGGGAGCAGGGATGAGGACAGTGTTCGCGACTCGAGAATCGACCGTAGCAGTAGGGAGCGCGAGGTCCATAACGGTGGCCAGGATGATCGCGATCGAAAGACTCTGACCATTCAGCAGccgcaacagcagcaacagcagcagccgAATAACTACCCGGACTTACTCTACGCCGTATCAACTGACAAAAAAAGTGCCTGTGATAGTAAGCTTATAGTAGATCATTCGAGCCAGAAGACTCAACAGccgcaacagcaacagcagcagaaGGAGTACGCTGCGGTGGGCGGACTGGTTGTGCAACTGCAACGGGGCTACAATACTGGGAACAACAGGTCCGGCGAGCAGACCAACAGTCAACAATCGGCGGAGCAACGCGGCCCCGTGATCAGTATGGAAGACTCCGTTGAGCAGTAG
- Protein Sequence
- MTGPVAAVAAAAAAAGVGGVPVVGAGGGRRAYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERDASLSSTHSHPHEPGAPATTTTTITTTTTTTTTTTTTTPPNTTQNASATTPPPQVDEFNTRPLGLGEVARLEVDDKELSGAEEEKEVEKALLKPLLSLEDLVRFSALEGSGGDSLRTLLQRGQETGTEWPGLEHANIGPYIQKMLAAAAPFKGMETQDYRIPEVMRRLMSEDKRLNKSVNGDQSQPHHQQLHHQQSHSMHPQTQTQQQQRGPITNDDFNPNIEEEASDSAQGRAILKIPSYKPASTPGCSSKNGEPTSAAFAQGFAAAAAAAAAASASSPGLLERASPAFSGTSSPTNSLVGKTVAVNFRDVIAKSISVKFQEGQPVATAGMAGCQSAGMVQSQQTMVTDPSPFKRGRYTPPQPASQHQQSQSKPQSQDANKAKPATGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDQKQSDDKAKETAATAAAVAAANMRPGTADKKPQLKPQKPFTPPSGIPGPNGLKMPPFMEGMAHLPFAPFNFWNPTPFMPSPFMAGAPNVPTILPEQYFATSRMRGLQEQQRNATMVQQQQQRDRDGIGVAATTTESAGSSNSRGTPMTKSSREVADSLYDGSGANGSFLDSLIRSSLETGIPRDQRTMTEARSQQQSSSQQQLPESMRSKALIDQLCRNSRRTPVPRMTQDSSEDESYRGPSAAGRSVPERPERVPTVDLSPSPSERGRADDGSDRLTSPPTPLSISRTGSRDEDSVRDSRIDRSSREREVHNGGQDDRDRKTLTIQQPQQQQQQQPNNYPDLLYAVSTDKKSACDSKLIVDHSSQKTQQPQQQQQQKEYAAVGGLVVQLQRGYNTGNNRSGEQTNSQQSAEQRGPVISMEDSVEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00863867;
- 90% Identity
- iTF_00084444;
- 80% Identity
- -