Lmar019470.1
Basic Information
- Insect
- Lasioglossum marginatum
- Gene Symbol
- kn
- Assembly
- GCA_028455795.1
- Location
- CM052266.1:5653148-5659916[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.9e-109 2.1e-105 353.5 10.5 229 564 1 334 1 345 0.82
Sequence Information
- Coding Sequence
- ATGTTCGTCCACAACAACAGCAAACATGGGCGCAGAGCGAAACGATTGGATCCCAGCGATCCCGGCGAGTACAACAGTCTCTACACTCCGGTTCCCCTTCAAACACCATGCATAAAGGCAATATCACCGAACGAAGGCTGGACGTCCGGAGGATCGACAGTGATAATCATAGGTGAAAATTTCTTCGATGGACTTCAAGTAGTGTTTGGGTCGATGTTGGTGTGGAGCGAGCTAATCACACCTAACGCAATAAGGGTGCAAACTCCACCGAGGCAGATACCGGGCGTTGTCGAAGTCACACTGTCGTATAAGACTAAACAGTTCTGCAAGGGGGCGCCTGGGAGATTTGTTTATGTGTCACTCAATGAGCCAACGATCGACTACGGCTTCCAAAGGTTACAAAAGCTGATTCCACGACACCCGGGCGACCCCGAGAAATTACCGAAGGAGATTATACTGAAGAGGGCGGCGGACCTCGCGGAAGCTTTGTACAGTATGCCCAGGAGTGGAAACGCAGGAATTACAGGTGCTCCCAGGAGTCCTGGCTCTGGCCATCCACCTGCGCCGCCCACATCTAGTTCGGCGACGGCGTTCAACTCGTACACAGGACAACTGGCAGTGACAGTGCAAGAAAACGGTAGTGCGGCGAAATGGACGGACGACGGTAGTTCCGTGACGACAGGAGCCAATGCTGGAGGCGGTGGTGGCGGAGGCGGTGGTGGCAGCGTCGGTGGCAGCGTCGGTGGGAACGTTGACGCCTATAGGCAAAGCAGTAGCGCGAGTCCACGCGGGGTTGTAACTGGAGGCGGTTATTGCGGAAGTTCGGCCAGCACACCCCACAGTCACAGCACCAATGGCAGTTACTCGGTTGCCAATCCCTACGCGGGTAGTCCAACACTTTACACTTCGCCGCACGAACAGTATGGCATTTTCTATACGTCTGGGGACGGGAGTGCGTTCGCCCCTGTAGTACGACCACCGACTACCTCAGTCCCACCGCACTGGTCCACACAGCACCACCTCGCCACAGCCGCCCAGTAA
- Protein Sequence
- MFVHNNSKHGRRAKRLDPSDPGEYNSLYTPVPLQTPCIKAISPNEGWTSGGSTVIIIGENFFDGLQVVFGSMLVWSELITPNAIRVQTPPRQIPGVVEVTLSYKTKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRSGNAGITGAPRSPGSGHPPAPPTSSSATAFNSYTGQLAVTVQENGSAAKWTDDGSSVTTGANAGGGGGGGGGGSVGGSVGGNVDAYRQSSSASPRGVVTGGGYCGSSASTPHSHSTNGSYSVANPYAGSPTLYTSPHEQYGIFYTSGDGSAFAPVVRPPTTSVPPHWSTQHHLATAAQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01070145;
- 90% Identity
- iTF_00360699;
- 80% Identity
- iTF_00762344; iTF_00762292; iTF_00865115; iTF_00862306; iTF_00866500; iTF_00861678; iTF_00864431; iTF_00862358; iTF_00860919; iTF_00863068;