Hqua002142.2
Basic Information
- Insect
- Halictus quadricinctus
- Gene Symbol
- kn
- Assembly
- GCA_028454245.1
- Location
- CM052122.1:2207072-2213271[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3e-109 1.9e-105 353.5 10.5 229 564 1 334 1 345 0.82
Sequence Information
- Coding Sequence
- ATGTTCGTCCACAACAACAGCAAACATGGGCGCAGAGCGAAACGATTGGATCCCAGCGATCCCGGCGAGTACAACAGCCTGTACACTCCGGTTCCCCTTCAAACGCCATGCATAAAGGCAATATCACCGAACGAAGGCTGGACGTCCGGAGGATCGACAGTGATAATCATAGGCGAAAATTTCTTCGATGGACTTCAAGTAGTGTTTGGGTCGATGCTGGTCTGGAGCGAGTTAATCACACCTAACGCAATAAGGGTGCAAACTCCACCGAGGCAGATACCGGGAGTCGTCGAGGTTACACTGTCGTATAAGACTAAACAATTCTGCAAGGGGGCGCCTGGGAGATTTGTTTATGTGTCACTGAACGAGCCGACGATCGACTACGGCTTCCAAAGGTTACAAAAGCTGATTCCGCGACACCCGGGCGACCCCGAGAAATTACCGAAGGAGATTATACTGAAGAGGGCGGCGGACCTCGCGGAAGCTTTGTACAGTATGCCCAGAAGCGGAAACGCGGGAATTACAGGTGCTCCCAGGAGTCCTGGTTCTGGCCACCCACCTGCACCCCCCACATCCAGTTCGGCGACGGCGTTCAACTCGTACACAGGACAACTGGCAGTGACAGTGCAAGAAAACGGTAGTGCGGCGAAATGGACGGACGACGGTAGTTCCGTGACGACAGGAGCCAATGCTGGAGGCGGTGGTGGCGGAGGCGGTGGTGGCAGCGTCGGTGGCAGCGTCGGTGGGAACGTCGACGCCTATAGGCAAAGCAGTAGCGCGAGTCCACGCGGGGTTGTAACTGGAGGCGGTTATTGCGGAAGTTCGGCCAGCACACCCCACAGTCACAGCACCAATGGCAGTTACTCGGTTGCCAATCCCTACGCGGGTAGTCCGACACTTTACACCTCGCCGCACGAACAGTATGGCATTTTCTATACGTCTGGGGACGGGAGTGCGTTCGCCCCTGTAGTACGACCACCGACTACCTCAGTCCCACCGCACTGGTCCACACAGCACCACCTCGCCACAGCCGCCCAGTAA
- Protein Sequence
- MFVHNNSKHGRRAKRLDPSDPGEYNSLYTPVPLQTPCIKAISPNEGWTSGGSTVIIIGENFFDGLQVVFGSMLVWSELITPNAIRVQTPPRQIPGVVEVTLSYKTKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRSGNAGITGAPRSPGSGHPPAPPTSSSATAFNSYTGQLAVTVQENGSAAKWTDDGSSVTTGANAGGGGGGGGGGSVGGSVGGNVDAYRQSSSASPRGVVTGGGYCGSSASTPHSHSTNGSYSVANPYAGSPTLYTSPHEQYGIFYTSGDGSAFAPVVRPPTTSVPPHWSTQHHLATAAQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01070145;
- 90% Identity
- iTF_00360699;
- 80% Identity
- iTF_00863751;