Lmal016800.1
Basic Information
- Insect
- Lasioglossum malachurum
- Gene Symbol
- retn
- Assembly
- GCA_028455605.1
- Location
- CM052314.1:16727815-16742482[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.6e-21 2.2e-17 63.2 0.0 11 89 7 81 1 81 0.90
Sequence Information
- Coding Sequence
- ATGAGATCAGTGTATAAGAAACATTGCAAAGGGACACCGATCAATCGGCTGCCGATCATGGCGAAATCGGTGCTGGATCTGTACGAGCTATACAACCTGGTGATCGCTCGAGGCGGCCTGGTCGACGTAATTAACAAGAAGCTCTGGCAGGAAATCATCAAAGGTCTCCACCTGCCATCGAGCATCACTTCCGCCGCGTTTACTCTGCGCACCCAGTACATGAAATACCTGTATCCGTACGAGTGCGAGAAAAGACAACTGTCGACACCGGCAGAATTGCAAGCAGCCATCGATGGAAATCGACGAGAAGGTCGCCGTAGCAGTTACGGTGCCTACGGGGGCGGCGGAGGCAGTAGTGACAGCATGGTGCAGAGGAACCCACATACACCAAATGCTCTGGCGTTGCACACGCAAATGTCGCCGCTCTCTTTAGTTACAGCAGTAGCTGCCAGTGGACAACACCATGGACCACAGTCTCTGGTGAACGGAAGCGCAGCGCACACACCTCTGCCACACCATCCTCATCATCCTCAGCACCCTCAGGGATCACTGGGACAGCCGCCGAATGCCGGACCTATTCCGGGAATGGCACCGTCCGAGTTTGAAGCACGCATGGTAGAGTATGTGAAGCTGCTGAACAAGGAGCTGAGAAGTGCGGGCGCTGGTACACCACCCCCCATGATCCACCGACAAGGTAGCGCATCACCTCAACCGTCGACACCGCCACGAGACGGAGCTTTCAGCGCTCTGGAAATGTCTCGGCTCACACTGTGGAACATGTACAACAACAACACCCTCTATCCTGGAGTTGGACATCAACCACCCATGTCGCCACAGCCTTCACACTCGCCGTTACCTGCGGCGCCTAGCCCTGAACCTCAGAGGGAAGCCCTCGACCTTGGACTCAGGTCGTCGCCCGTGTCCTCATCACCGGCAAGACAAAGTTCACCTTCTTCAGGCGGAAGTTTACAAGTTAAAAGAGACCCTGACGTAATCGGCACACCTGGACCACCACCTGCGAAAAGGTTGCTCTCGGACGACGACAGTCCTGTTGAGAAGAGCGCACCCTCTATACTAGGAACGCACATTAAAATTTCCAATCGAGGGGACGGAAGGAACGGCGATAATTCTCTAGCGGTCAGTATGGAGCTGAACGGAGTGATGTACCAAGGAGTATTGTTCGCTCAAACAGACAGCAAGACCACGAGCAGCAATACGGCGAAAGCGTCGCGAAGCATGGTCTCGTGA
- Protein Sequence
- MRSVYKKHCKGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRQLSTPAELQAAIDGNRREGRRSSYGAYGGGGGSSDSMVQRNPHTPNALALHTQMSPLSLVTAVAASGQHHGPQSLVNGSAAHTPLPHHPHHPQHPQGSLGQPPNAGPIPGMAPSEFEARMVEYVKLLNKELRSAGAGTPPPMIHRQGSASPQPSTPPRDGAFSALEMSRLTLWNMYNNNTLYPGVGHQPPMSPQPSHSPLPAAPSPEPQREALDLGLRSSPVSSSPARQSSPSSGGSLQVKRDPDVIGTPGPPPAKRLLSDDDSPVEKSAPSILGTHIKISNRGDGRNGDNSLAVSMELNGVMYQGVLFAQTDSKTTSSNTAKASRSMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00860918;
- 90% Identity
- iTF_00762343;
- 80% Identity
- -