Basic Information

Insect: Lasioglossum leucozonium
Gene Symbol: RREB1
Assembly: GCA_028454225.1
Location: CM052212.1:8594681-8605083[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.027 1.9 9.1 0.6 1 23 80 102 80 102 0.96

2 16 0.00018 0.013 15.9 0.3 1 23 116 138 116 138 0.98

3 16 8.5e-07 6e-05 23.3 1.2 1 23 144 167 144 167 0.98

4 16 0.88 62 4.4 0.1 1 23 256 280 256 280 0.87

5 16 0.0079 0.56 10.8 2.3 2 23 286 308 285 308 0.96

6 16 0.81 58 4.5 0.3 1 20 364 383 364 385 0.90

7 16 0.2 14 6.4 0.1 1 23 497 519 497 519 0.96

8 16 3e-05 0.0021 18.4 0.3 1 23 528 550 528 550 0.98

9 16 0.0013 0.093 13.2 2.8 1 23 556 579 556 579 0.97

10 16 0.00049 0.034 14.6 3.0 1 23 963 986 963 986 0.97

11 16 0.0002 0.014 15.8 0.1 3 23 1252 1272 1250 1272 0.97

12 16 1.5 1.1e+02 3.6 4.9 1 23 1278 1301 1278 1301 0.97

13 16 0.0062 0.44 11.1 2.3 1 23 1340 1364 1340 1364 0.97

14 16 0.34 24 5.7 5.7 1 23 1447 1470 1447 1470 0.96

15 16 0.012 0.84 10.2 0.4 2 23 1521 1542 1520 1542 0.94

16 16 1.4 1e+02 3.7 8.2 1 23 1548 1570 1548 1570 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.027	1.9	9.1	0.6	1	23	80	102	80	102	0.96
2	16	0.00018	0.013	15.9	0.3	1	23	116	138	116	138	0.98
3	16	8.5e-07	6e-05	23.3	1.2	1	23	144	167	144	167	0.98
4	16	0.88	62	4.4	0.1	1	23	256	280	256	280	0.87
5	16	0.0079	0.56	10.8	2.3	2	23	286	308	285	308	0.96
6	16	0.81	58	4.5	0.3	1	20	364	383	364	385	0.90
7	16	0.2	14	6.4	0.1	1	23	497	519	497	519	0.96
8	16	3e-05	0.0021	18.4	0.3	1	23	528	550	528	550	0.98
9	16	0.0013	0.093	13.2	2.8	1	23	556	579	556	579	0.97
10	16	0.00049	0.034	14.6	3.0	1	23	963	986	963	986	0.97
11	16	0.0002	0.014	15.8	0.1	3	23	1252	1272	1250	1272	0.97
12	16	1.5	1.1e+02	3.6	4.9	1	23	1278	1301	1278	1301	0.97
13	16	0.0062	0.44	11.1	2.3	1	23	1340	1364	1340	1364	0.97
14	16	0.34	24	5.7	5.7	1	23	1447	1470	1447	1470	0.96
15	16	0.012	0.84	10.2	0.4	2	23	1521	1542	1520	1542	0.94
16	16	1.4	1e+02	3.7	8.2	1	23	1548	1570	1548	1570	0.98

Sequence Information

Coding Sequence: ATGAGAGCCGGCCAATGGCGAGGATCTCCCCCACCATTGGTTCAGCGCAGCATCACTATGATTCCACTTATTGAATTATTATTGTTGTTTGTTGACGTTGTTACCATTCAAGTTCTAATCTTTCTTGATTTTGTTTCAGTGACTGTCAAGAGTAGTGCTGATCAGGAGGGACACGACAACGAAGACCAGGTTAACGCAGCATCGCCACTATCGAGTGTGGAGTTACCAGAAAGCGCTCACCCTTGTCCCGCGTGTCCCATGATACTGTCTAGCTGCCGGGAGCTGACAAACCACCTGCGCGGCCACAATTCTCCGCGCAGCACCGATTGCAGCGGCGAGGAGGATTATTCTTGCGGCGTGTGCCACAAGGTGCTGAGCTCTGCGAGCTCGTTGGACAGACACGTGCTGGTGCACTCCGGAGAGCGCCCATTCAAATGCAAGTACTGCGAGATGGCGTTCACGACAAACGGGAACATGAACAGACACCTGCGAACGGCGCATTGTTCTACCCCGTCGCAGAGTTGCACGGACTCGGAAGGAGGTAGCAGCGACTCCGAGAAACTCTCGAAAAGAAATTTGGAGGAGTATAACAACAACGAGATCGCGAAGAGGAAATCGCCGGAGATTGTCCAGCAGGAGAACGATACTGGACGTTTGAAGCGAAAGTGCGCGGAGTACCTGCGCGACATCGAAAGTAGTCGCAAGGTACTGTTGAACAACTCGCGGGTCCCGGTCACGCCCAGACCCGATGACAACCAAAATGTATATATTTGTCCTGTGTGCGGAAGACAGGACTTCGTCACCATCGGGCTTCTGGAGGGTCACCTGGAGAGCTGCCACCCGGATGTCCCATCGAAATGTGAGTCTTGCAACCTGTCTTTTAAAAACCATCGAGCGCTAAATCTTCATCGATCAATGGGGCATTTTGCAGACGATTCGACCGGGAACGCCGCGAGGAACCTGCGCAACTCGGTGGTCGGCTTCAACGATCTGACCTTCGTAGACTTCTCCTCGATCAAATTCCCGACGATCGCTCGAGCGGTCTGCGAGCAATCGCTGCATCGGCCTGCCTCGGGGGAGGTCGCGAAATATCAATGCTCCAAGTGTCTCAGAGCGTTCCCCTGTAGCTCGGCCTTGGACGCTCACGAGAACGATTGCGGCACTGTCAACACCCCGGCCAGAGCGATCGACGACAGCCAGTCGAGGAGAGACGACTTCTTCGCCGGCCTGGACCTTCAGAACAAGGCCGCCATGGCCGAGGCTAAGGAGGGCAAGGACCTGGCCGATATTCAGAGTATCATCTCTGTCACATCCGGCCCCATCCTGCAGAACTTTCCCAGATCGGACGCGAGCACTCCGGAGAACAACATGAGGTTCAACCTCAATATTAGCTCGTCCGGCTCCTCCGGAACCTTCTCGGAGTCCCACGAAGAGGAGGCGCAGGATGCGTTCGCCGCCGAATTCAGGAGGATGAAGCTGAAGGGCGAATTCCCGTGCAGATTGTGCACCGCGATCTTCCCGAACCTGAGGGCGCTGAAGGGCCACAACAGGGCGCACATGGGAGTCGGACCTGGCATGCCGTACCCCTGCAACATGTGTCCCTACACGAGCACGGACAAAGCGACCCTGGTGAGACACCTGAGGTCCCACAACGGCGATAGGCCTTACGAGTGCTCGTTGTGTAATTACGCGTTCACAACGAAGGCCAATTGCGAGCGACACGTGAGGAACAGACACGGAAAGCTCACCAGAGAGGACATCAAGAGCGTCCTGATCTATCATCCGAACGAGGACTCTACCACCGACAACGTGGAAAGAAGCTCGCCCAGGGTGATGAAAGACGACCCGAGGAAGATCTTGATGTATCCTAACGAGCGGGACGAGCTACACCATCAGGCTCAGATACACTATCCGTCGGTACCGATGGAGGGCCGCAGCGAGATCAGGGTCATCGAGGAGGCCAAACTGCAGAATTCGTTGTCCCTGCACAACAGTCACTACGAAAACGCTGAGGCGTTTCCGATGCCGAGTAATCAGCCGATCGAGTTGACGAAGAACGCGGAGGACAGAAAGTCCGTGAACAACAAGCAGGACTACGCGAAGCTCGAGGAGGACCTGGAGTCGAGGTCCTCGGGAGGCAGCATGTCTCTAGTCAACGATACCAAATCCGACTCACACCAAAGAATGCAAGCTAGTCCGATGAACCTAAAGAAGGCTCTGACGGTATCGCAGATTGCCGGCGAGGACCGTCCACTGGATCTGTCCATGGACGTTTTAGATCTCAGCAAGAAGACGAAGGAGAAAGAGGACGGAGACCGCTCGGCCTCGCAAGATCGGTATGGAAACAGTCAGGAGCTGTACGACGCCACCAGTCAGCTATTGATCACCGAGGCCCTGCTGAAGGCTGGTCAGGCGAACTCTGCACAGCCATCTTCCCTGGAGGCGCTGTACGCGAATGCCCATCTGATCTACAGAAATTTCGGATCGTTTCACGGAGGCGTGGGAGCGGCGGCGGCTGCGGGAATATTGCCACCGTATTTGTTCAGCCCCCACGTGTTCGGCCAGGACTTCGCCATGAAAGAGAGGCTGCAGAAGGAGCTGGTCAGGGGCCTGCAGCTGACAAGCGGCGGCACGTTGATGGAGCCTCCGATCGGTGCCGCCGGGTACAACGCCTATCCTCAAGGACCGGATATGAACCCGCAATCGTCGACGAATGACCATAACGATTACGCGAACCTGGTCCCACCGAAACTGGCCAGCAAGGCGCTGAGTAATCGGGATGCGCCTGAGAACCACGCACCCCCGCCTAATTCCGTAAAAATGGTGATCAAGAATGGCGTTCTCATGCCCAAACAGAAGCAGAGGCGGTACAGAACGGAGAGGCCGTTCACTTGTGAACATTGCTCCGCGAGATTCACCTTACGGAGCAACATGGAGCGGCACATTAAACAGCAGCACCCTCAGCACTGGAGCCAGAGACCCAGAGGAGGACACTCGACCAGAGGAAGACCTCCTGCGAGCCATCCGATGTTGTTACAGAATCTGGACCAACCGAGTGGCTCCCGGATGGCCCAGCCGTACTCCAACATCCTGCCCAAAGCGGACCAATCGAGTGGAGAGTACCCCGCGAAACACCCGATATCGGACCAGGTGAAGTACGCGATCTTGGCGCAACAGCTGAAGGCAAACAAGATCGAGGACAACGATTCCGAAGAGGAACTGGTGATCGACGAGGGTCCACAGGAGAAGGACCAGGAATCTCAGAAGGAGAAGTGCACCAGCCTGTTGAGGGGCCAGTTGGAAGCAGCAGAGGTTGCTAAGGAGGTGCAAGAAGATGCTGAGAAGTGCACTAAAGAGGACACGGCCACTACCGAATCGACAAACAGCGATAACGAGAACGAGGACAAGCTGTCGGTCGCGGAGCAGTCGGTGGAGACCAATGAGGCGAGTGACAAGAGTACGGTCAAGGCTGAACAGGACGAAGAGAAGTCTGAGAAGGCTGAAGACGGTGCGCCCGACTTGGCTAGCGTGTCAGAATTGTTGGACAATGCGTCGCAGCAGTACCAGCAGTTCCAACCTCAGTATCTGAGCGACGAGGAAGGCTTGGTCGCGTCGAACAGCGACTGCAACAACTCCGGCAGCGACGAGAAATCGGACTCCGTGAACTCGTTGAATTCCGAAAGCCCCTCGAAAAAGAAGAAAAAAAAGATGAAGAAAAAGTCCGCGTACTCGATGGCTCCGAATCGAGTGATCTGCCCGTACTGCGACAGGCCGTTCCCCTGGACTTCATCTTTACGGAGACATATCCTGACGCACACCGGACAGAAGCCGTACCAGTGCATGTTCTGTTCGCTGCTCTTCACCACAAAATCCAACTGCGATCGTCATTTGCTGAGGAAGCACAAGACGAACCCGAACAAGATTCTTCGCAGAGTTCGAAACTCCTCGTCGCCGGACAGCCAAGCGACGGCCAGCACCAGCAACTCGTTCTCGATGAGGAACGTGCCCGAGAGGCCATACAAGTGCAATCAGTGCCCCAGCTCGACCTTCTCCACCCTGGGCAACCTGAAGAAGCACCGCACGACGAAGCACGCGCGAAAGACGAAGTCCAGATCCGACACTCCGTCCAGCGAGCCTCAAAACAGCCCTCCAGAATGCTCGAAGCAGAACGAGCAGACCGATTACGACAGTCAATCGTCCAGCATCTCCGAAGGCATGGAGACCGCTTCGGTGCCGGAAGCACCGAAGACAAATTCGAACAGCTTGCCTTCCACCAGCGACACACCCAAATCCAGAAGACCTTCTCCCAGGGCATCGCCAGGACCAAGCGATGTACCATTTAAGTGTCACCTGTGTGACTGCGGATTCTCCGACAGGCAAGATTGTCTGGAGCACATCAAGGTGAATCACAAGAGGTCCTACGAGATGCTGGTGGCCAAGGGAGCATTGGACATGGATATCGACACCGTGGAGGACCAGCAACAGCCGCCCCCTTCGCAGCATCACAGCGATGGCGAAGAGAAGCGAGGCCGATTCCCTGACTACAGTAACAGAAAAGTGGTCTGTGCATTCTGTATGAGGCGGTTCTGGTCTGCGGAGGACCTGCGTcgacacatgaggacgcacactggcgagagacctttctcctgcgacatctgctgcaggaggttcaccctgaagcacagcatgctgcgacacaggaagAAACACGAGTCCGTGGATTCGACAATGTACGTAGGCACCAGTGGGGACGAAGAGAACATTCCATCCCAACCACCTACCATCGCACCAAGGAATCAACAGCAACAATCACCGGTTCTGGTAGTTGCAAGCTCTGGAAGCTCCAGACTACAGGATAGAATATCGTTGCCAAATGTGACACCGGTTGCAACAGGGGATGCTGCGCCTAGCGGACTAGTACGTTTCAACCCCTACGAGAAGCTGACAACATTGACGGGTAAGCTGGCTAGCATTCCGCAAAACGCGAATCCCGATGCCAGCGAAAGCACCGACAATGACCTAATCTCAAATCTATTGGGGATTAGGGATAAGAACTTTATAGACAGAGTTCTTCAAGCGTCTGCCGACGATGCAGCCAAACTTCTCGGGGTGAAACACAGCCACGAGTGA
Protein Sequence: MRAGQWRGSPPPLVQRSITMIPLIELLLLFVDVVTIQVLIFLDFVSVTVKSSADQEGHDNEDQVNAASPLSSVELPESAHPCPACPMILSSCRELTNHLRGHNSPRSTDCSGEEDYSCGVCHKVLSSASSLDRHVLVHSGERPFKCKYCEMAFTTNGNMNRHLRTAHCSTPSQSCTDSEGGSSDSEKLSKRNLEEYNNNEIAKRKSPEIVQQENDTGRLKRKCAEYLRDIESSRKVLLNNSRVPVTPRPDDNQNVYICPVCGRQDFVTIGLLEGHLESCHPDVPSKCESCNLSFKNHRALNLHRSMGHFADDSTGNAARNLRNSVVGFNDLTFVDFSSIKFPTIARAVCEQSLHRPASGEVAKYQCSKCLRAFPCSSALDAHENDCGTVNTPARAIDDSQSRRDDFFAGLDLQNKAAMAEAKEGKDLADIQSIISVTSGPILQNFPRSDASTPENNMRFNLNISSSGSSGTFSESHEEEAQDAFAAEFRRMKLKGEFPCRLCTAIFPNLRALKGHNRAHMGVGPGMPYPCNMCPYTSTDKATLVRHLRSHNGDRPYECSLCNYAFTTKANCERHVRNRHGKLTREDIKSVLIYHPNEDSTTDNVERSSPRVMKDDPRKILMYPNERDELHHQAQIHYPSVPMEGRSEIRVIEEAKLQNSLSLHNSHYENAEAFPMPSNQPIELTKNAEDRKSVNNKQDYAKLEEDLESRSSGGSMSLVNDTKSDSHQRMQASPMNLKKALTVSQIAGEDRPLDLSMDVLDLSKKTKEKEDGDRSASQDRYGNSQELYDATSQLLITEALLKAGQANSAQPSSLEALYANAHLIYRNFGSFHGGVGAAAAAGILPPYLFSPHVFGQDFAMKERLQKELVRGLQLTSGGTLMEPPIGAAGYNAYPQGPDMNPQSSTNDHNDYANLVPPKLASKALSNRDAPENHAPPPNSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQHWSQRPRGGHSTRGRPPASHPMLLQNLDQPSGSRMAQPYSNILPKADQSSGEYPAKHPISDQVKYAILAQQLKANKIEDNDSEEELVIDEGPQEKDQESQKEKCTSLLRGQLEAAEVAKEVQEDAEKCTKEDTATTESTNSDNENEDKLSVAEQSVETNEASDKSTVKAEQDEEKSEKAEDGAPDLASVSELLDNASQQYQQFQPQYLSDEEGLVASNSDCNNSGSDEKSDSVNSLNSESPSKKKKKKMKKKSAYSMAPNRVICPYCDRPFPWTSSLRRHILTHTGQKPYQCMFCSLLFTTKSNCDRHLLRKHKTNPNKILRRVRNSSSPDSQATASTSNSFSMRNVPERPYKCNQCPSSTFSTLGNLKKHRTTKHARKTKSRSDTPSSEPQNSPPECSKQNEQTDYDSQSSSISEGMETASVPEAPKTNSNSLPSTSDTPKSRRPSPRASPGPSDVPFKCHLCDCGFSDRQDCLEHIKVNHKRSYEMLVAKGALDMDIDTVEDQQQPPPSQHHSDGEEKRGRFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICCRRFTLKHSMLRHRKKHESVDSTMYVGTSGDEENIPSQPPTIAPRNQQQQSPVLVVASSGSSRLQDRISLPNVTPVATGDAAPSGLVRFNPYEKLTTLTGKLASIPQNANPDASESTDNDLISNLLGIRDKNFIDRVLQASADDAAKLLGVKHSHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00625690;
90% Identity: -
80% Identity: -