Basic Information

Insect: Lasioglossum leucozonium
Gene Symbol: -
Assembly: GCA_028454225.1
Location: CM052205.1:11042942-11047578[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.067 4.8 7.9 2.4 1 23 374 396 374 396 0.97

2 18 0.00093 0.066 13.7 0.9 2 23 433 454 432 454 0.98

3 18 0.00079 0.056 13.9 1.3 1 23 582 604 582 604 0.96

4 18 0.0031 0.22 12.1 0.4 2 23 608 629 607 629 0.96

5 18 0.00026 0.018 15.5 1.8 1 23 716 738 716 738 0.97

6 18 0.00026 0.019 15.4 0.5 1 21 744 764 744 768 0.92

7 18 0.0013 0.09 13.3 3.4 2 23 848 869 847 869 0.96

8 18 0.00038 0.027 14.9 4.4 1 23 945 967 945 967 0.96

9 18 0.00034 0.024 15.1 0.7 1 20 972 991 972 993 0.94

10 18 0.051 3.6 8.2 0.5 2 23 1004 1025 1004 1025 0.97

11 18 3.5e-05 0.0025 18.2 0.6 2 23 1064 1085 1063 1085 0.97

12 18 3.2e-05 0.0022 18.3 1.6 1 23 1090 1112 1090 1112 0.95

13 18 0.00018 0.013 16.0 2.9 1 23 1118 1140 1118 1140 0.98

14 18 5.6e-06 0.0004 20.7 0.4 1 23 1156 1178 1156 1178 0.95

15 18 4.6e-07 3.2e-05 24.1 0.6 1 23 1184 1206 1184 1206 0.99

16 18 5e-05 0.0035 17.7 0.2 1 23 1212 1234 1212 1234 0.97

17 18 0.00018 0.013 15.9 4.1 1 23 1240 1262 1240 1262 0.96

18 18 0.013 0.92 10.1 0.4 1 20 1268 1287 1268 1289 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.067	4.8	7.9	2.4	1	23	374	396	374	396	0.97
2	18	0.00093	0.066	13.7	0.9	2	23	433	454	432	454	0.98
3	18	0.00079	0.056	13.9	1.3	1	23	582	604	582	604	0.96
4	18	0.0031	0.22	12.1	0.4	2	23	608	629	607	629	0.96
5	18	0.00026	0.018	15.5	1.8	1	23	716	738	716	738	0.97
6	18	0.00026	0.019	15.4	0.5	1	21	744	764	744	768	0.92
7	18	0.0013	0.09	13.3	3.4	2	23	848	869	847	869	0.96
8	18	0.00038	0.027	14.9	4.4	1	23	945	967	945	967	0.96
9	18	0.00034	0.024	15.1	0.7	1	20	972	991	972	993	0.94
10	18	0.051	3.6	8.2	0.5	2	23	1004	1025	1004	1025	0.97
11	18	3.5e-05	0.0025	18.2	0.6	2	23	1064	1085	1063	1085	0.97
12	18	3.2e-05	0.0022	18.3	1.6	1	23	1090	1112	1090	1112	0.95
13	18	0.00018	0.013	16.0	2.9	1	23	1118	1140	1118	1140	0.98
14	18	5.6e-06	0.0004	20.7	0.4	1	23	1156	1178	1156	1178	0.95
15	18	4.6e-07	3.2e-05	24.1	0.6	1	23	1184	1206	1184	1206	0.99
16	18	5e-05	0.0035	17.7	0.2	1	23	1212	1234	1212	1234	0.97
17	18	0.00018	0.013	15.9	4.1	1	23	1240	1262	1240	1262	0.96
18	18	0.013	0.92	10.1	0.4	1	20	1268	1287	1268	1289	0.89

Sequence Information

Coding Sequence: ATGGACGCCGTAGGAATAAATACATCCGATTCGGCGCAAAATGAGGAGGAAAGCATCGTGTCGACAGTGGAAATATGTCGTGTTTGTCTTCTGGGTAATCTAGTGATGCGGGACTTGTTTCTAGAGAATGAGGTTTCTTCTCTATCGGCGAAAGCGATGAGTTTTACAAACGTTAAGATGTTACCCGGCGATGGACTGCCAACGCGAGTATGTTGCATGTGCGCGGATAAACTTGAGTCCGCGTACGAATTCAAGCTACAGGTGGAACAAGCAGACACGGTTCTAAGAGAAAAGTTTGTCACCATGAATATGAAGGAAGAATTATTTTTCAACGAAGTCGAAGTACACCTGGAGGTAGGAGAAAGAAACGAGGACATAGAACGGCTGCACATAGAGAATCATTATCAAAGCGCTGTAGAAACTTTGGAGACAATGTCCGGAGAAGAAAAGTCGTCCCTACTGAAGGATCAGTTGGCTTTGTTGCAAGTGGGAAAGTTGGCTGAACAGGAACAAACGATAACCGAACAGCACGATAGTTCGGTGATGGAAGAAGCGATCGTGTCCGAACAGATGTTGGACGAGTGTTCCAACAGAGAGGAAGAAAATGGTAAGGCTGTGGAGATTATAACCAAGAACGAAATAATTCTGAAACACGAAACTGCTGAAAATTGCATCGAGAATATTTCGACGGTAGAGCACGATTACATATTGCAACAAGAATGCATACTGGAAAACGATAGTCGGCGAAAAGAAGGAACTGGGGAACAAGAGGAAGAGCGAGAAGAGCAGCAGTTAATGTCAGAAGAATCGTTTTCGCGCGACGATTGCGTACAGTATGTAAATATGTTGGTGAAAGCGGCTGACGTGACTCACAGAGAAGACGCAGAAGACGAAGATCCGAGCGAAATCGAGCAACCTGATGAAGAGGGTTCGAGAACGAATGCAAAGGTGGAACAAGATTCTCAGTGTCAAAGCGAGACCAGAAGAAGCAAACGTAAGCAAGTTCAAAGTAACACCGACGCCATGCGAGATTCCGACGAGGAGAATTATTTTGAAAACTTAAATTTAAGTTCGCGACTGAAGAAAGCCGAGGACTCCGACAAATCGGAAAGAATCTTTTTCATGTGTTACCTTTGCGACAAAGAATTTTTATCGAAAAACGTTTTGCGAGAGCACATGCATTCTCACGAGGAAGTCCGACAGGTATTGTCGTTGCGAAAGTCCGTGGAAAAGCCAGAGAAAGACGTTGATAGATGCAACCTCACGAAATTACCTCCATCTGGTAAAAGATCGAATAAATGCCCTTACTGCGGTAAACAATATATATACATCATATCGTTCAGCAAACATTTGAAGAAACACGAGAAAGAGAAAGAAGAGGCGAAAGAGGAATCGTTGCCATTAGAAATTTCGTTTCACGAAGACGAGCACAGTTTGGATTTCGAGGATTTTTCGGATAAAGATAACTTGAATTCCGAGTACCGAAAAAGAGTCAGAAAAAGAGAAGGCGTGGCTGTAGCGAAATCGGAGAAAGAGGAAAGTGTGGTAGAGCAGACGGAGGAAGAGCAACAGGAAGAGGAGGAAGAAGCTGTAGACGAAGAAAACGAGGAGTCCGAAGGAACCGGATGCGAGGAGAAAGCGAAACGGAAAGAGAAAGAGACAAGCGGCGAGGGTAAAGAAAGGATCTGTAATCGAAATGAAAATGGAGAACGAAAGAAACGCGAAGCGCGCGTAGAATCGTCTTTCGCGTGCGACAAGTGTCTAGAAAAATTCTCTACTAGACGAGGTTTGCGAAAACACACGATTTCGCATGCCGCTCTCAGATGCAGCGTGTGCGAAGAAGAGTTCGACTCGTTGGAGAAGCTGAGAAACCATCGGGCAAAGCATGTCGTTGAAGGTGTATTGTCCGAACAAGATCTAGAAACGGGTTCGGAGTTTCCGATTGACAGGGACGAGGATGGCTGTCGGGTTGTCGTGGATAAGCAGAAAGAAGAGGAACAAGGAACTCACGAAGGAAGAAGGCGAAAGGAAAAGGAAGGGGAACGGGTACGGGAAGGAGATCGAGAACGAGAATCTCAGGCACAATTATCGGAGAACGCGTTGAAGAGAAGCGCAAGAAACACGGAGATGCATTCGGAGGTCGAGTTCAGTTGTAAGGTATGCTATCAGCGATACACGAGAATGGATTTGTTGCAAAGGCATATGGAGCAACACGAGCGTGTTAAAAATTACAAATGTACAGAATGCAATAAAACGTTCGGTAATGAACTGACTTTACGAAATCATCTTATAGCTACGAATCACAAAACTTTTGTCAGAGGACAGGAGTACGATCCAAATAAACGGATCAAACGAGTGGCTGCGAGAGCAGCTCAGAAAATAATTGATAAAATTAAGACGGAAGACGGCCTGGAAGATTACGAGGACGAAGATGAACGGGAGGAGAAGATAGTCGAACGGAACTCCACGGAAGGAGATTACGGACGGAAGAAGCGTGACGTTCTATCACCGAAGAAACACAATTGCTCGAAAAAGGAGTTGGAATGCACGAGCTGCAACAAAAAGTGTAGCTCGAAACAGTCGCTAGCGAAACACATGGAACAACACGTGAAGGAGGAGAAAACTGTCAAGTTGGAGAGGGAGAGAGAAAGAGAGAAGGAACGAGAGAGGGAGAGGGAGAGAGAAAGGCAAAGACAAAGACAGGGCACCTTCGGGGACAAAAGAGAACGACAGAGGAGCTGCGCGAACGACGCGGTTGAATCGAACGAGATCAACAAGGACGACGACTACGATTCAGATTTCGAAAGCGGGTTGGATTGGCCGATGGACAATCACGAATGCGTAAAGTGCAAGAAACGATACAGCACGAAGAAATCGTTGCTACGCCATCAACTTTTGCACGAAGAACCGAATTTCGAATGCGACATTTGCAACGTGAAATTCTATCGTAAGGACAAGTTGAAAGCTCACTACGACAAGTGCTCGGAAAAGAACCCTGATCAGGTGAGGAAGTGCAACATTTGCGGGGACAGTTTCGAAAATAACGAGATATTGCGAGAGCATAGATCGAAACACGTGACTGAAGGCATTCTTACCGAGGAGGACCTGAGGGATATCGAGCCGCGCCCGGAAGAGAAGAAGCCAGGAGAGAAGATCGGTAGGAAAAGAAGGACCGATATAGTGGGATTGGAGTGTACCGAATGTAACAAACAATACACCTCTAGGAAAGGGTTACTGCGTCATATTCAGGTTCACGAAGGGAAGAAGTACCTTTGCGACATATGCCCGAAAAAGTTCTACAGAAGAGAACATTTGAAGATACACGTGGCCAAGCACAACATGATCAAACCATACAAGTGTACGCGATGTACGAAACGTTTCATCAAAGAAGAACAACTGACCAATCATTTGTCGAAACACGATCGAACTTTTAAGAAGAATAAAGAAACTGATAGCTCCAAAAGATTTCTTTGCGAGATTTGCTCGAAAAGTTTCACCCAATCGACGACGTTGATCGCGCATCTCAGGGCTCACAACGGCATTAAACCGTACGTTTGCGAGGTATGTTCTAGACCGTTCACTACAAACGCCTATCTAAAGATGCACATGAGGACGCACACCCAAGAACGGCCGTACATTTGTCAGTACTGTTCGCGCGCTTTCGCCAGAGCCGACACGCTCGCCAATCACTTGACATCGCACACCGGCGAGGCAAAGTATCACTGCAAGTATTGTCCGAAAAACTTCCGTCGCCTGAAATCCCTGAAGGAGCACGTTTTCATTCACACGGGTCAAAGACCATACGCTTGCCCGACTTGCGACCGCCGTTTCAACAACAACGGAAGTCGCTACGCCCACAGCAAGAGATGCAAACAAAATTTTGTTCAAAATCAGAATCGTGGTCAAACGTTGACACAAGTACAATCTGCCCAGAATCAGCAAAGAATATTACATCAACAAACCACTCTTGGACAGACGCAACTGTTGAAAGCGCAGAACATTAAAACTATTACGATCACTAGACAACCAGATGCCGTTGCTGCCCAACACGTTGCGCAGCATCAAGAAATAATAATGCCCCTGATCTTTCCTTTAACCGTCACAGTCGCCGATATCAGCGAAGAAGTTATATTACCGGAAGGAACCAAATTGTTTACGACCACTTAA
Protein Sequence: MDAVGINTSDSAQNEEESIVSTVEICRVCLLGNLVMRDLFLENEVSSLSAKAMSFTNVKMLPGDGLPTRVCCMCADKLESAYEFKLQVEQADTVLREKFVTMNMKEELFFNEVEVHLEVGERNEDIERLHIENHYQSAVETLETMSGEEKSSLLKDQLALLQVGKLAEQEQTITEQHDSSVMEEAIVSEQMLDECSNREEENGKAVEIITKNEIILKHETAENCIENISTVEHDYILQQECILENDSRRKEGTGEQEEEREEQQLMSEESFSRDDCVQYVNMLVKAADVTHREDAEDEDPSEIEQPDEEGSRTNAKVEQDSQCQSETRRSKRKQVQSNTDAMRDSDEENYFENLNLSSRLKKAEDSDKSERIFFMCYLCDKEFLSKNVLREHMHSHEEVRQVLSLRKSVEKPEKDVDRCNLTKLPPSGKRSNKCPYCGKQYIYIISFSKHLKKHEKEKEEAKEESLPLEISFHEDEHSLDFEDFSDKDNLNSEYRKRVRKREGVAVAKSEKEESVVEQTEEEQQEEEEEAVDEENEESEGTGCEEKAKRKEKETSGEGKERICNRNENGERKKREARVESSFACDKCLEKFSTRRGLRKHTISHAALRCSVCEEEFDSLEKLRNHRAKHVVEGVLSEQDLETGSEFPIDRDEDGCRVVVDKQKEEEQGTHEGRRRKEKEGERVREGDRERESQAQLSENALKRSARNTEMHSEVEFSCKVCYQRYTRMDLLQRHMEQHERVKNYKCTECNKTFGNELTLRNHLIATNHKTFVRGQEYDPNKRIKRVAARAAQKIIDKIKTEDGLEDYEDEDEREEKIVERNSTEGDYGRKKRDVLSPKKHNCSKKELECTSCNKKCSSKQSLAKHMEQHVKEEKTVKLEREREREKERERERERERQRQRQGTFGDKRERQRSCANDAVESNEINKDDDYDSDFESGLDWPMDNHECVKCKKRYSTKKSLLRHQLLHEEPNFECDICNVKFYRKDKLKAHYDKCSEKNPDQVRKCNICGDSFENNEILREHRSKHVTEGILTEEDLRDIEPRPEEKKPGEKIGRKRRTDIVGLECTECNKQYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMIKPYKCTRCTKRFIKEEQLTNHLSKHDRTFKKNKETDSSKRFLCEICSKSFTQSTTLIAHLRAHNGIKPYVCEVCSRPFTTNAYLKMHMRTHTQERPYICQYCSRAFARADTLANHLTSHTGEAKYHCKYCPKNFRRLKSLKEHVFIHTGQRPYACPTCDRRFNNNGSRYAHSKRCKQNFVQNQNRGQTLTQVQSAQNQQRILHQQTTLGQTQLLKAQNIKTITITRQPDAVAAQHVAQHQEIIMPLIFPLTVTVADISEEVILPEGTKLFTTT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00865472;
90% Identity: iTF_00865472;
80% Identity: -