Basic Information

Insect: Lasioglossum calceatum
Gene Symbol: -
Assembly: GCA_963966675.1
Location: OZ016543.1:16557845-16564431[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.33 36 5.7 0.2 1 23 848 870 848 870 0.96

2 10 0.011 1.2 10.4 0.0 2 23 965 986 965 986 0.95

3 10 0.048 5.3 8.3 0.1 3 23 1173 1193 1171 1193 0.96

4 10 5.4 5.9e+02 1.9 0.1 1 11 1204 1214 1204 1221 0.81

5 10 0.0031 0.34 12.1 0.1 1 21 1277 1297 1277 1298 0.95

6 10 0.027 2.9 9.1 0.4 2 23 1325 1347 1324 1347 0.94

7 10 3.2 3.5e+02 2.6 0.2 1 23 1396 1418 1396 1418 0.94

8 10 0.3 32 5.8 0.7 1 23 1437 1459 1437 1459 0.91

9 10 0.0019 0.21 12.7 3.2 1 23 1674 1696 1674 1696 0.98

10 10 0.078 8.5 7.7 0.1 1 23 2109 2131 2109 2131 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.33	36	5.7	0.2	1	23	848	870	848	870	0.96
2	10	0.011	1.2	10.4	0.0	2	23	965	986	965	986	0.95
3	10	0.048	5.3	8.3	0.1	3	23	1173	1193	1171	1193	0.96
4	10	5.4	5.9e+02	1.9	0.1	1	11	1204	1214	1204	1221	0.81
5	10	0.0031	0.34	12.1	0.1	1	21	1277	1297	1277	1298	0.95
6	10	0.027	2.9	9.1	0.4	2	23	1325	1347	1324	1347	0.94
7	10	3.2	3.5e+02	2.6	0.2	1	23	1396	1418	1396	1418	0.94
8	10	0.3	32	5.8	0.7	1	23	1437	1459	1437	1459	0.91
9	10	0.0019	0.21	12.7	3.2	1	23	1674	1696	1674	1696	0.98
10	10	0.078	8.5	7.7	0.1	1	23	2109	2131	2109	2131	0.97

Sequence Information

Coding Sequence: ATGGTGAATGCTAATAACGAAATGGACGGCACAGACTTTTGTACCACTGATTGTCCTTTGGAAAGTACGATCAATGTACCACCAATGCCACACACGCCAAGGAAAAATGGAGATAGACTGTTCAAATATAAATCGTATTATTTGAAAAAGAAACCTGCGTTTGTTAACGTAACTCATTTGCAAAATGAAAGTAGCATGGTACATGACTTCTGTAAATTAGTGTGTAAACCGATGACCGTAAGACTTACAAGATTACCAGATTCAGAGTTGAGAAAACTGACCGCAAAAGTATCGCCTGTAACTGTACCTATCAGAAGGACGCCGATAAAAAGACCGCTTTTTAGATTTTACGGAAgtagaaagaaaaaaagaaataacactattaatatagagaaaTGCAGCAAAGATTACGTACCGATTCTTACAGAAATACAGAGTAACAAAATTAATATAACTGTAGATAATAATAAGACTGTACATACAAATGTTCATGAAAAAGTACCAGAAACAAATGCTAAGTTTGTACATACCAGAAAACGGTTACAAGTTAAAACAGCTTCCAAAGTACAAAAATCTTGCAACCAtgaacaatgtaaaaaagatttatTAAAAACTGTTAAGCAACCAATCATAATATTAAATAGAATAGATGATGTAATTAATAAGTTAGCACAATCATTTGCAAAAGTTACCAATAAGCAAAACCACACAGTAGAAGAGCTGATAGTCACGCAAAATATAGCTGTGACACAAACCGAGGACCTTTGCTTAACAAGTACTAGCAGAAGTGATTGTTCTTCGAACGACCGAGTTAATGATAATAATAGCGGAGCAGAAAGCGATGACCTGTACCAACACAGGTTGATATCCAGAAGAAAACGTAAACTTTTTTACGATTCCAGTGATGAGTCTGATATAGACCAATTGCATAAAGAAACATCGATACAAGCGAACATGTTAAAATTGACTACACTGCAAAAGGAAATTGCGGATACTAGTGAAAAATGCAATGAATTACGTAGAGACACTCTGGTGCAAATAAAGAAGTTAAAATTGAGTTCACCGCTAAAGGTAACTGCAAAGACTGCTGACAAACACACTGATGAGGAAGAAGTAGAGAATCCATTACTTAGATTTTCTAACAAAGAAAGTATAGAAACAGGTATTGTAAATGGCGAACCACCTGTTGAAAATGAAGatgtaaatattgaaaataacaaAGTAGGTGTTCAGGAACCTCTGGTTCAGCAAGAAGAAGATCCTGGCATTAAGAACGTAGAAGTAGATAACAGGGAAGAAAGAATGAATGTTGAGAGTATACGAGCAAAAAACATGGAAGAAAGAATAAATGTTGAGAGTACACAAGCAAAAGACAGGAAAGAAAGGAGAACTGTTGAGAGTACACGAGCAAAAGACAGGAAAGAAAGAATAACTGTTGAGAGTACACGAGCAAAAGATAGGAAAGAAAGAATAACTGTTGAGAGTACACAAGCAAAAAACATGGAAGAAAGAATAAATGTTGAGAGTACACAAGCAAAAGGCAGGAAAGAAAGAATAACCGTTGAGAGTATGCAAGCAGTTGTGGCACCTCAACATGTTGATGTCAATGTTGAGGGTCTTGATGCAGATGTTGAGAATGAAGATACGGATATTTATATAGTGAATGTTGAAAATGAAGAAATGCGTGTTGAAAGTGACAAAGTTGATGTTGAGACTGCAAATACGAAGTGTAACTCGGACGCTTCAGAGAATGCAGTGCAAGTAAGTACTAAAAACATTACAGGAGACAGTGCTTCCAGCTTGTTAGCTACAGAAATAAATGTTGTACACAATTCGAGAGGACATACAAGTTCTAAACCTGCGGATGAATTAGTTGGCGAAGCTGGAGAGATACAGCAGCATAAATGGGAGCGATCTGTATCTGAGAGTGGGTTTCCAAAAAAATACAAATTACCTAAACAAGCGAAGATCCTCTTGGTAGATTTGCAACATATCAAAAGTTCATGTGGTAATAAATATTCAGCTACAGAGGTTGAAAAACTTACACAGAGAAATATAGATTCATCGCcgaattgtaattttatatgtACGACTCAAAATCTTTTGATCCCAGGTGTAGCCTATTCAGAGACTGTTGCCGCTAGATCGAAGCCTGACAACAATAACGCAGAGTCGAATGTGTGTTCTACTGACAGCGAATCGACAGATTTGAACATTTCTCTGTGTTCGGAAAATATAATAGGAAGGAAAGGAGCTGTAGGAAAAGAAAGACATTCTAATAATGTATTGAAGAGAAACAAACTATACAAGATGATGTCCGACGGCGCCATTGGGTATTCTGTATCTTCGCATCTTCCAAAACGATCTACCAAAGAATTAGGATTGTCGAGTTCTCCACGGAAGTTTGgacacaggagttcTACAATAAAAGATCAATTGAAAGATGTAACCTTTAGGAATGTCCCTATAACTTCTCCAACAAAGTATGAAAAACTTACAGAGAACAAAGATTCTAGCAAATCTAAAGAATCTTCCAGTAATTATAAATGCATTGTTTGCGACGTCTACTTCGACGATTATTCCGTTTTGCAACAACATTTAAGTGAGCATGCAAAGCAACAGCTTCCTTCATCGAAACCAAAGTATACAGTTTCTGAAAGGTGTGGTAACGTTGAAGAAATATTACAATCTCCACCTCTGACGCCAGAGAGACAAACACTACCACAGTCTGCTACGGATAAGAATATTTGCAAGGATGTATCTTCATCTGACAATATTGTAGATAAAAATGTATCGTTGCACAAAAGACAGCAGAAGAAGTTGAAGTTGCCAAAACAAAAAGGTGGTTTGTCAAAGAAGAAAGTTTCATGTAAACCATGTAAACTGACGAACGAGTGCAGCGTGTGTTTCCAGGAATTTCCAACGAGAGCAGATTTGGCAGCCCATATTTTCTTGCACACAGAGAGTGAGCTGCAAGTGGCGTACGAAGCTGCAAAGCAGAAAAGGTACCAACAAATCGATAATGCAGAATCGGAAACCCAAATGACAGAGGATACTGTGGTAAATGCTGCTGATTCGGTTGAAAAACTTTCAACGAATACGAACGAGTATAAAACTAGTTCAAAAGCACAGACTGCACAAAACCAAAGTGATCAGACATCGAAACCCGCTGCAGTTAAGGTTTCTGAAGAAGTAAAGGAAATTGATCCTAAAACAAGTAAACCAACCAACAATGGGGAAAGCAGTTCTAATAATCATGTAACTTCTGTGATAAATAAGATAGAGAAATCAAAAACGACTAAGAAAGGCGGGTCTAAAGCATTGTTTACGATATGCCAGTGCCACAATAAAGCAGACGTCAACTTCAACCAGCTGCAGATTGAGATAGTTCTGCTGTGTCACACTTGCAGAGTATTGTTCCGAAGTATAGAATGTTTCGAGACTCATTATCGTCTTCCAGAGTATTCAGCTTGTAATCAGAACCGGCCGGGAAGTGGTCGATCTCCAAATTTATTCTGTGCTACTTGCGGGATGATATTCAGTTCGGTTCAAGACGTGCGTCAGCATTTAGAGATGCATATCCGTTTCAAGAAAAACTGCACCATAGACTTTCGTTGCAACATCTGCAAAGTGATCTTCATTGGTATCGGATCGCTCTTTCACCTCCACTGGTCTAAACACACAAAGGATTCATTCTGGGTAGCCAGCGAACAATCGTTCCCTAAAATATCTTTGATCGACCCGAAATCCAAGAAGCAGCGACCAACGTTTAAACCAGGAGAATTTGTTACCACCAAATATGTGGATAATTACTTTTATGTTGCAGAATATGTTTGCTCCAACTGTAAAGTGGCTTTCGCTAACGAAGACTATTTAAAGACACATCTACTGAACTGTAAGGCACATAGTTTAGAGAAAAGTCAGACTGTACAGTCCGATGCTACAGAAATAAGGCAATTAGAGTTGCATTTAATTTGTAGTCTTTGCCAGTATGCTAGTTCCAGCAAAGTAGAGTTGTACACACACATGAAGGACAAGCATAAATTCGCCGTGGAGCCCCAGTTTGTGTGCGTGTCTCTTAGAACTATGACGACAACATTCATTTGCAGCATTTGTATGGATGTAAGTGAGAACATCGACAAGTTCAATGAGCACTGGTTTAGCCATTATGTGAAGCAACCGTATTTCGTTTGTATATATTGCAACAAAGATAGCAATAGCGTGGATGCTTTCAAAGAGCACGCCAAAGAGCACGAGTTGGCAACAAGACAGAACATATCTTGTAATGTGAAGTATCGGGACGCTGAACACGTCTGTAAGATATGCCATGTTAGTGTTGAATCCGAGAAATTGTTAAATGAGCACAATGTTATACACAATCCAAATGATCTGATAAGGAGAAAGGGCAATGAAGTCACGACTCAGAAGAGTATACTCAAAACAATCCTGGCAATCAAGGAGCCTGATAAAGAGAACAAAGCAACAGAGAAGCAGGCCGTAGGATGTTCGAAATCTGTCGCAGACCTTGACAAGGAGAAATTAATTAGTATACTGGAAGGCAACGAGGAAGAGGATTCTGAAAATGAGTTGGTAATCGACTTAGCAGAGTATCCAGAGAACGAGTCGGCAGTCAAAGACAGACCTGAAGAAAAGAAAGTTCCATCTACGTTGGCAACATTTAGGTTGCCAGCAGCTACATTACCAGTACCTACGTTGCCAGTACCTATGTCACCAGTACCTACATTGCCAGTACCTACATTGCCAGTACCTACGTTGCCAGTATCTACATCGCCAGAATCTACGTTGCCAACCACCGAGTTAAATGCTGCTGTGGACTCTGGGATTCAAACTATTGTACAGAACGATGTTGAGTCGAAAGACGTGAATGATGTAAAGGATGAATCTGAAAAAGATGAAGATCCGATCAAAGAAGCAGAGGCAAGCGAGCCTACGAAACAAAAGCACGGATTTCTGCGGGTGAAAGCTTTAACAGAGCTTTTAGAAGATACGAGCAACTTGTTCGTGTGCAAGGTATGCAATTATTCTTGCGAGACTGCTGAATATTTGAGGCAGCATTATTTTACTCATATAACTCCAAAGCAACCGCAGCCTTCCCAGCCGGAGGTACCAGTTTTTCAGCAACCTGCGAGCTCCACCGAACAGAGCAGACCTGTTAACAAGACATTACCTGGAAAGAAATTTATTGCGACTGGTAGGACAGTCCAGGTTCCACTTCTCTCGAAGCTCTATCCAGGAACAGCGACCAACGCGAAACTAGTAGCCTCAAAACTGAAACCTGCAGGCTCTTCTGCGCAGGCTTCCACGAAAACGGCGTACCACAAGAATCTGCCGGCTTGTAACATTGTCCGTAAAATAATTGTACGACGTAGCGCTATCGAATCAGATGGAAACGTTCCCACAACGATGGGAGAAGGTTCTTCTGATGCACAGACTACCCAAATAGCGTCGACAGTCGATGCTAATAATATAAACCACCGAGGATCTGTAATTAACGCGAcaaattcgaataaaaatccTACCGGGAATTTTCCTTCAACGAAAAAAAACAAGGCTGCTGTGGgtttcaataattatattcaCAAAACTTGTTCGAAGCATTATTCAAGGAATTCGAGGGCACACGACTTATCAAAGTATCCCCAACCACAACATCTGAAGAAAGGGGTAGCTGAGAAGAATTACAACATGGGTAGTGGTGCAGCAATGAGGAATGACAATGTTGCAAACGGTAACCAGAACTATAGTCGGGCCCAGCACAATGTCCAGAACCAGGCAAGGATGAACTCTCCTGCATCGATGTACTATCAGTATCCGAATTCTGAGCACGTTTACGCTGGGATTGATCAGGGGCCCATGCAAAGTCAGCAAGTGATGCAACAAGTGCCGAATCACACGGTATCGAGGAACCTGCCTCCTAGCTATTATTACAAGAATTCCACGGTCGGTGGGATGTCGATAGTTATCAATCAGGCAGCACCAGCTGTCTCAAATCTGTCGACGGTGGATATAAGACAGCAGCAAGGACACCAGCCGCGAATCTATCCGGTGTACACGAATCCTGTGGTACCGGTAGACTCGCAACCTTATGGACAACAGCAGCCGCAGAACATTATTGACTATTCTGGTACCGGTGAAGTGTATCAAGTGTCGCCACATGAATACAGAGGACCGATCAGTGAACATATCACCACCCGTGGAAGAACAATTGAACCCTCTGCAAACCTAACTTGCCCCTATTGCCCGAACTCCCCTACATTTGGCACTCAGGAGATGTTTGAGTTTCATCTAAATGTCAGCCATAATTACGTCTGCAATCTTTGCGGcttattgttttacaatatcGATGATATAAGGATTCATAAAATCAAACACGGTTTGATGGATAATTGA
Protein Sequence: MVNANNEMDGTDFCTTDCPLESTINVPPMPHTPRKNGDRLFKYKSYYLKKKPAFVNVTHLQNESSMVHDFCKLVCKPMTVRLTRLPDSELRKLTAKVSPVTVPIRRTPIKRPLFRFYGSRKKKRNNTINIEKCSKDYVPILTEIQSNKINITVDNNKTVHTNVHEKVPETNAKFVHTRKRLQVKTASKVQKSCNHEQCKKDLLKTVKQPIIILNRIDDVINKLAQSFAKVTNKQNHTVEELIVTQNIAVTQTEDLCLTSTSRSDCSSNDRVNDNNSGAESDDLYQHRLISRRKRKLFYDSSDESDIDQLHKETSIQANMLKLTTLQKEIADTSEKCNELRRDTLVQIKKLKLSSPLKVTAKTADKHTDEEEVENPLLRFSNKESIETGIVNGEPPVENEDVNIENNKVGVQEPLVQQEEDPGIKNVEVDNREERMNVESIRAKNMEERINVESTQAKDRKERRTVESTRAKDRKERITVESTRAKDRKERITVESTQAKNMEERINVESTQAKGRKERITVESMQAVVAPQHVDVNVEGLDADVENEDTDIYIVNVENEEMRVESDKVDVETANTKCNSDASENAVQVSTKNITGDSASSLLATEINVVHNSRGHTSSKPADELVGEAGEIQQHKWERSVSESGFPKKYKLPKQAKILLVDLQHIKSSCGNKYSATEVEKLTQRNIDSSPNCNFICTTQNLLIPGVAYSETVAARSKPDNNNAESNVCSTDSESTDLNISLCSENIIGRKGAVGKERHSNNVLKRNKLYKMMSDGAIGYSVSSHLPKRSTKELGLSSSPRKFGHRSSTIKDQLKDVTFRNVPITSPTKYEKLTENKDSSKSKESSSNYKCIVCDVYFDDYSVLQQHLSEHAKQQLPSSKPKYTVSERCGNVEEILQSPPLTPERQTLPQSATDKNICKDVSSSDNIVDKNVSLHKRQQKKLKLPKQKGGLSKKKVSCKPCKLTNECSVCFQEFPTRADLAAHIFLHTESELQVAYEAAKQKRYQQIDNAESETQMTEDTVVNAADSVEKLSTNTNEYKTSSKAQTAQNQSDQTSKPAAVKVSEEVKEIDPKTSKPTNNGESSSNNHVTSVINKIEKSKTTKKGGSKALFTICQCHNKADVNFNQLQIEIVLLCHTCRVLFRSIECFETHYRLPEYSACNQNRPGSGRSPNLFCATCGMIFSSVQDVRQHLEMHIRFKKNCTIDFRCNICKVIFIGIGSLFHLHWSKHTKDSFWVASEQSFPKISLIDPKSKKQRPTFKPGEFVTTKYVDNYFYVAEYVCSNCKVAFANEDYLKTHLLNCKAHSLEKSQTVQSDATEIRQLELHLICSLCQYASSSKVELYTHMKDKHKFAVEPQFVCVSLRTMTTTFICSICMDVSENIDKFNEHWFSHYVKQPYFVCIYCNKDSNSVDAFKEHAKEHELATRQNISCNVKYRDAEHVCKICHVSVESEKLLNEHNVIHNPNDLIRRKGNEVTTQKSILKTILAIKEPDKENKATEKQAVGCSKSVADLDKEKLISILEGNEEEDSENELVIDLAEYPENESAVKDRPEEKKVPSTLATFRLPAATLPVPTLPVPMSPVPTLPVPTLPVPTLPVSTSPESTLPTTELNAAVDSGIQTIVQNDVESKDVNDVKDESEKDEDPIKEAEASEPTKQKHGFLRVKALTELLEDTSNLFVCKVCNYSCETAEYLRQHYFTHITPKQPQPSQPEVPVFQQPASSTEQSRPVNKTLPGKKFIATGRTVQVPLLSKLYPGTATNAKLVASKLKPAGSSAQASTKTAYHKNLPACNIVRKIIVRRSAIESDGNVPTTMGEGSSDAQTTQIASTVDANNINHRGSVINATNSNKNPTGNFPSTKKNKAAVGFNNYIHKTCSKHYSRNSRAHDLSKYPQPQHLKKGVAEKNYNMGSGAAMRNDNVANGNQNYSRAQHNVQNQARMNSPASMYYQYPNSEHVYAGIDQGPMQSQQVMQQVPNHTVSRNLPPSYYYKNSTVGGMSIVINQAAPAVSNLSTVDIRQQQGHQPRIYPVYTNPVVPVDSQPYGQQQPQNIIDYSGTGEVYQVSPHEYRGPISEHITTRGRTIEPSANLTCPYCPNSPTFGTQEMFEFHLNVSHNYVCNLCGLLFYNIDDIRIHKIKHGLMDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00860733;
90% Identity: iTF_00860733;
80% Identity: -