Basic Information

Insect: Lasioglossum albipes
Gene Symbol: -
Assembly: GCA_000346575.1
Location: KB640328.1:199192-207399[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.33 26 5.7 0.2 1 23 855 877 855 877 0.96

2 10 0.01 0.84 10.4 0.0 2 23 972 993 972 993 0.95

3 10 0.047 3.8 8.3 0.1 3 23 1180 1200 1178 1200 0.96

4 10 5.3 4.3e+02 1.9 0.1 1 11 1211 1221 1211 1228 0.81

5 10 0.0031 0.25 12.0 0.1 1 21 1284 1304 1284 1305 0.95

6 10 0.019 1.5 9.6 0.2 2 23 1332 1354 1331 1354 0.94

7 10 3.1 2.5e+02 2.6 0.2 1 23 1403 1425 1403 1425 0.94

8 10 0.29 23 5.8 0.7 1 23 1444 1466 1444 1466 0.91

9 10 0.0019 0.15 12.7 3.2 1 23 1676 1698 1676 1698 0.98

10 10 0.11 9 7.1 0.1 1 23 2111 2133 2111 2133 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.33	26	5.7	0.2	1	23	855	877	855	877	0.96
2	10	0.01	0.84	10.4	0.0	2	23	972	993	972	993	0.95
3	10	0.047	3.8	8.3	0.1	3	23	1180	1200	1178	1200	0.96
4	10	5.3	4.3e+02	1.9	0.1	1	11	1211	1221	1211	1228	0.81
5	10	0.0031	0.25	12.0	0.1	1	21	1284	1304	1284	1305	0.95
6	10	0.019	1.5	9.6	0.2	2	23	1332	1354	1331	1354	0.94
7	10	3.1	2.5e+02	2.6	0.2	1	23	1403	1425	1403	1425	0.94
8	10	0.29	23	5.8	0.7	1	23	1444	1466	1444	1466	0.91
9	10	0.0019	0.15	12.7	3.2	1	23	1676	1698	1676	1698	0.98
10	10	0.11	9	7.1	0.1	1	23	2111	2133	2111	2133	0.97

Sequence Information

Coding Sequence: ATGGTGAATGCTAATAACGAAATGGACGGCACAGACTTCTGTACCACTGATTGTCCTTTGGAAAGTACGATCAATGTACCACCAATGCCACACACGCCAAGGAAAAATGGAGATAGACTGTTCAAATATAAATCGTATTATTTGAAAAAGAAACCTGCGTTTGTTAACGTAACTCATTTGCAAAATGAAAGTAGCATGGTACATGACTTCTGTAAATTAGTGTGTAAACCAATGACCGTAAGACTTACAAGATTACCAGATTCAGAGTTGAGAAAACTGACCGCAAAAGTATCGCCTGTAACTGTACCTATCAGAAGGACGCCGATAAAAAGACCGCTTTTTAGATTTTACGGAAGTAGAAAGAAAAAAAGAAATAACACTATTAATATAGAGAAATGCAGCAAAGATTACGTACCGATTCTTACAGAAATACAGAGTAACAAAATTAATATAACTGTAGATAATAATAAGACTGTACATACAAATGTTCATGAAAAAGTACCAGAAACAAATGCTAAGTTTGTACATACCAGAAAACGGTTACAAGTTAAAACAGCTTCCAAAGTACAAAAATCTTGCAACCATGAACAATGTAAAAAAGATTTATTAAAAACTGTTAAGCAACCAATCATAATATTAAATAGAATAGATGATGTAATTAATAAGTTAGCACAATCATTTGCAAAAGTTACCAATAAGCAAAACCACACAGTAGAAGAGCTGATAGTCACGCAAAATATAGCTGTGACACAAACCGAGGACCTTTGCTTAACAAGTACTAGCAGAAGTGATTGTTCTTGGAACGACCGAGTTAATGATAATAATAGCGGAGCAGAAAGCGATGACCTGTACCAACACAGGTTGATATCCAGAAGAAAACGTAAACTTTTTTACGATTCCAGTGATGAGTCTGATATAGAGCAATTGCATAACGAAACATTGATACAAGCGAACATGTTAAAATTGAGTACACTACAAAAGGAAATTGCGGATACTAGTGAAAAATGCAATGAATTACGTAGAGACACTCTGGTGCAAATAAAGAAGTTAAAATTGAGTTCACCGCTAAAGGTAACTGCAAAGACTGCTGACAAACACACTGATGAGGAAGAAGTAGAGAATCCATTACTTAGATTTTCTAACAAAGAAAGTATAGAAACAGGTATTGTAAATGGCGAACCACCTGTTGAAAATGAAGATGTAAATATTGAAAATAACAAAGTAGGTGTTCAGGAACCTCTGGTTCAGCAAGAAGAAGATCCTGGCATTAAGAACGTAGAAATAGATAACAGGGAAGAAAGAATGAATGTTGAGAGTACACGAGCAAAAAACATGGAAGAAAGAATAAATGTTGAGAGTACACAAGCAAAAGACAGGAAAGAAAGAATAACTGTTGAGAGTACACGAGCAAAAAACTTGGAAGAAAGAATAAATGTTGAGAGTACACAAGCAAAAAACAGGAAAGAAAGAATAAATGTTGAGAGTACACAAGCAAAAAACAGGAAAGAAAGAATAACTGTTGAGAGTACACGAGCAAAAGACAGGAAAGAAAGAATAACTGTTGAGAGTACACGAGCAAAAGACAGGAAAGAAAGAATAACTGTTGAGAGTACACGAGCAAAAAACATGGAAGAAAGAATAAATGTTGAGAGTACACAAGCAAAAGGCAGGAAAGAAAGAATAACCGTTGAGAGTATGCAAGCAGTTGTGGCACCTCAACATGTTGATGTCAATGTTGAGGGTCTTGATGCAGATGTTGAGAATGAAGATACGGATATTTATATAGTGAATGTTGAAAACGAAGAAATGCGTGTTGAAAGTGACAAAGTTGATGTTGAGACTGCAAATACGAAGTGTAACTCTGACGCTTCAGAGAATGCAGTTCAAGTAAGTACTAAAAACATTACAGGAGACAGTGCTTCCAGCTTGTTAGCTACAGAAATAAATGTTGTACACAATTCGAGAGGACATACAAGTTCTAAACCTGCGGATGAATTAGTTGGCGAAGCTGGAGAGATACAGCAGCATAAATGGGAGCGATCTGTATCTGAGAGTGGGTTTCCAAAAAAATACAAATTACCTAAACAAGCGAAGATCCTCTTGGTAGATTTGCAACATATCAAAAGTTCATGTGGTGTAGCCTATTCAGAGACTGTTGCCGCTAGATCGAAGCCTGACAACAATAACGCAGAGTCGAATGTGTGTTCTACTGACAGCGAATCCACAGATTTGAACATCTCTCTGTGTTCGGAAAATATAATAGGAAGGAAAGGAGCTGTAGGAAAAGAAAGACATTCTAATAATGTATTGAAGAGAAACAAACTATACAAGATGATGTCCGACGGCGCCATTGGGTATTCTGTATCTTCGCATCTTCCAAAACGATCTACCAAAGAATTAGGATTGTCGAGTTCTCCACGGAAGTTTGGACACAGGAGTTCTACAATAAAAGATCAATTGAAAGATGTAACCTTTAGGAATGTCCCTATAACTTCTCCAACAAAGTATGAAAAACTTACAGAGAACAAAGATTCTAGCAAATCTAAAGAATCTTCCAGTAATTATAAATGCATTGTTTGCGACGTCTACTTCGACGATTATTCCGTTTTGCAACAACATTTAAGTGAGCATGCAAAGCAACAGCTTCCTTCATCGAAATCAAAGTATACAGTTTCTGAAAGGTGTGGTAACGTTGAAGAAATATTACAATCTCCACCTCTGACGCCAGAGAGACAAACACTACCACAGTCTGCTACGGATAAGAATATTTGCAAGGATGTATCTCCATCTGACAATATTGTAGATAAAAATGTATCGTTGCACAAAAGACAGCAGAAGAAGTTGAAGTTGCCGAAACACAAAGGTGGTTTGTCAAAGAAGAAAGTTTCATGTAAACCATGTAAACTGACGAACGAGTGCAGCGTGTGTTTCCAGGAATTTCCAACGAGAGCAGATTTGGCAGCCCATATTTTCTTGCACACAGAGAGTGAGCTGCAAGTGGCGTACGAAGCTGCAAAGCAGAAAAGGTACCAACAAATCGACATTGCAGAATCGGAAACCCAAATGACAGAGGATACTGTGGCAAATGCTGCTGATTCGGTTGAAAAACTTTCAACGAATACGAACGAGTATAAAACTAGTTCAAAAGCACAGATTGCACAAAACCAAAGTGATCAGACATCGAAACCCGCTGCAGTTAAGGTTCCTGAAGAAGTAAAGGAAACTGATCCTAAAACAAGTAAACCAACCAACAATGGGGAAAGCAGTTCTAATAATCATGTAACTTCTGTGATAAATAAGATAGAGAAAGCAAAAACGACTAAGAAAGGCGGGTCTAAAGCATTGTTTACGATATGCCAGTGCCACAATAAAGCAGACGTCAACTTCAACCAGCTGCAGATTGAGATAGTTCTGCTGTGTCACACTTGCAGAGTATTGTTCCGAAGTATAGAATGTTTCGAGACTCATTATCGTCTTCCAGAGTATTCAGCTTGTAATCAGAACCGGCCGGGAAGCGGCCGATCTCCAAATTTATTCTGTGCTACTTGCGGGATGATATTCAGTTCGGTTCAAGACGTGCGTCAGCATTTAGAGATGCATATCCGTTTCAAGAAAAACTGCACCATAGACTTTCGTTGCAACATCTGCAAAGTGATCTTCATTGGTATCGGATCGCTCTTTCACCTCCACTGGTCTAAACACACAAAGGATTCATTCTGGGTAGCCAGCGAACAATCGTTCCCTAAAATATCTTTGATCGACCCGAAATCCAAGAAGCAGCGACCAACGTTTAAACCAGGAGAATTTGTTACCACCAAATATGTGGATAATTACTTTTATGTTGCAGAATATGTTTGCTCCAACTGTAAAGTGGCTTTCGCTAACGAAGACTATTTAAAGACACATCTACTGAACTGTAAGGCACATAGTTTAGAGAAAAGTCAGACTGTACAGTCCGATGCTACAGAAATAAGGCAATTAGAGTTGCATTTAATTTGTAGTCTTTGCCAGTATGCTAGTTCCAGCAAAGTAGAGTTGTACGCACACATGAAGGACAAGCATAAATTCGCCGTGGAGCCCCAGTTTGTGTGCGTGTCTCTTAGAACTATGACGACAACATTCATTTGCAGCATTTGTATGGATGTAAGTGAGAACATCGACAAGTTCAATGAGCACTGGTTTAGCCATTACGTGAAGCAACCGTATTTCGTTTGTATATATTGCAACAAAGATAGCAATAGCGTGGATGCTTTCAAAGAGCACGCCAAAGAGCACGAGTTGGCAACAAGACAGAACATATCTTGTAATGTGAAGTATCGGGACGCTGAACACGTCTGTAAGATATGCCATGTTAGTGTTGAATCCGAGAAATTGTTAAATGAGCACAATGTTATACACAATCCAAATGATCTGATAAGGAGAAAGGGCAATGAAGTCACGACTCAGAAGAGTATACTCAAAACAATCCTGGCAACCAAGGAGCCTGATAAAGAGAACAAAGCAACAGAGAAGCAGGCCGTGGGATGTTCGAAATCTGTCGCAGACCTTGACAAGGAGAAATTAATTAGTATACTGGAAGGCAACGAGGACGAGGATTCTGAAAATGAGTTGGTAATCGACTTAGCAGAGTATCCAGAGAACGAGTCGGCAGTCAAAGACAGACCTGAAGAAAAGAAAGTTCCATCTACGTTGGCAACACTTAGGTTGCCAGCAGCTACATTACCAGTACCTACGTTGCCAGTACCTATGTCGCCAGTACCTACATTGCCAGTACCTACGTTGCCAGTATCTACATCGCCAGAACCTACGTTGCCAACCACCGAGTTAAATGCTGCTGTGGACTCTGGGATTCAAACTATTGTACAGAACGATGTTGAGTCGAAAGACGTGATTGATGTGAAGGATGAATCTGAAAAAGATGAAGATCCGATCAAAGAAGCAGAGGCAAGCGAGCCTACGAAACAAAAGCACGGATTTCTGCGGGTGAAAGCTTTAACAGAGCTTTTAGAAGATACGAGCAACTTGTTCGTGTGCAAGGTATGCAATTATTCTTGCGAGACTGCTGAATATTTGAGGCAGCATTATTTTACTCATATAACTCCAAAGCAACCGCAGCCTTCCCAGCCGGAGGTACCAGTTTTTCAGCAACCTGCGAGCTCCACCGAACAGAGCAGACTTGTTAACAAGACATTACCTGGAAAGAAATTTATTGCGACTGGTAGGACAGTCCAGATTCCACTTCTCTCGAAGCTCTATCCAGGAACAGCGACCAACGCGAAACTAGTAGCCTCAAAACTGAAACCTGCAGGCTCTTCTGCGCAGGCTACCACGAAAACGGCATACCACAAGAATCTGCCGGCTTGTAACATTGTCCGTAAAATAATTGTACGACGTAGCGCTATCGAATCAGATGGAAACGTTCCCACAACGATGGGAGAAGGTTCTTCCGATGCACAGACTACCCAAATAGCGTCGACAGTCGATGCTAATAATATAAACCACCGGGGATCTGTAATTAACGCGACAAATTCGAATAAAAATCCTACCGGGAATTTTCCTTTAACGAAAAAAAACAAGGCTGCTGTGGGTTTCAATAATTATATTCACAAAACTTGTTCGAAGCATTATTCAAGGAATTCGAGGGCACACGACTTATCAAAGTATCCCCAACCACAACATCTGAAGAAAGGGGTAGCTGAGAAGAATTACAACATGGGTAGTGATGCAGCAATGAGGAATGACAATGTTGCAAACGGTAACCAGAACTATAGTCGGGCCCAGCACAATGTTCAGAACCAGGCAAGGATGAACTCTCCTGCATCGATGTACTATCAGTATCCGAATTCTGAGCACGTTTACGCTGGGATTGATCAGGGGCCCATGCAAAGTCAGCAAGTGATGCAACAAGTGCCGAATCACACGGTATCGAGGAACCTGCCTCCTAGCTATTATTACAAGAATTCCACGGTCGGTGGGATGTCGATAGTTATCAATCAGGCAGCACCAGCTGTCTCAAATCTGTCGACGGTGGATATAAGACAGCAGCAAGGACACCAGCCGCGAATCTATCCGGTGTACACGAATCCTGTGGTACCGGTAGACTCGCAACGTTATGGACAACAGCGTCCGCAGAACATTATTGACTATTCTGGTACCGGTGAAGTGTATCAAGTGTCGCCACATGAATACAGAGGACCGATCAGTGAACATATCACCACCCGTGGAAGAACAATTGAACCCTCTGCAAACCTAACTTGCCCCTATTGCCCGAACTCCCCTACATTTGGCACTCAGGAGATGTTTGAGTTTCATCTAAATGTCAGCCATAATTACGTCTGCGATCTTTGCGGCTTATTGTTTTACAATATCGATGATATAAGGATTCATAAAATTAAACACGGTTTGATGGATAATTGA
Protein Sequence: MVNANNEMDGTDFCTTDCPLESTINVPPMPHTPRKNGDRLFKYKSYYLKKKPAFVNVTHLQNESSMVHDFCKLVCKPMTVRLTRLPDSELRKLTAKVSPVTVPIRRTPIKRPLFRFYGSRKKKRNNTINIEKCSKDYVPILTEIQSNKINITVDNNKTVHTNVHEKVPETNAKFVHTRKRLQVKTASKVQKSCNHEQCKKDLLKTVKQPIIILNRIDDVINKLAQSFAKVTNKQNHTVEELIVTQNIAVTQTEDLCLTSTSRSDCSWNDRVNDNNSGAESDDLYQHRLISRRKRKLFYDSSDESDIEQLHNETLIQANMLKLSTLQKEIADTSEKCNELRRDTLVQIKKLKLSSPLKVTAKTADKHTDEEEVENPLLRFSNKESIETGIVNGEPPVENEDVNIENNKVGVQEPLVQQEEDPGIKNVEIDNREERMNVESTRAKNMEERINVESTQAKDRKERITVESTRAKNLEERINVESTQAKNRKERINVESTQAKNRKERITVESTRAKDRKERITVESTRAKDRKERITVESTRAKNMEERINVESTQAKGRKERITVESMQAVVAPQHVDVNVEGLDADVENEDTDIYIVNVENEEMRVESDKVDVETANTKCNSDASENAVQVSTKNITGDSASSLLATEINVVHNSRGHTSSKPADELVGEAGEIQQHKWERSVSESGFPKKYKLPKQAKILLVDLQHIKSSCGVAYSETVAARSKPDNNNAESNVCSTDSESTDLNISLCSENIIGRKGAVGKERHSNNVLKRNKLYKMMSDGAIGYSVSSHLPKRSTKELGLSSSPRKFGHRSSTIKDQLKDVTFRNVPITSPTKYEKLTENKDSSKSKESSSNYKCIVCDVYFDDYSVLQQHLSEHAKQQLPSSKSKYTVSERCGNVEEILQSPPLTPERQTLPQSATDKNICKDVSPSDNIVDKNVSLHKRQQKKLKLPKHKGGLSKKKVSCKPCKLTNECSVCFQEFPTRADLAAHIFLHTESELQVAYEAAKQKRYQQIDIAESETQMTEDTVANAADSVEKLSTNTNEYKTSSKAQIAQNQSDQTSKPAAVKVPEEVKETDPKTSKPTNNGESSSNNHVTSVINKIEKAKTTKKGGSKALFTICQCHNKADVNFNQLQIEIVLLCHTCRVLFRSIECFETHYRLPEYSACNQNRPGSGRSPNLFCATCGMIFSSVQDVRQHLEMHIRFKKNCTIDFRCNICKVIFIGIGSLFHLHWSKHTKDSFWVASEQSFPKISLIDPKSKKQRPTFKPGEFVTTKYVDNYFYVAEYVCSNCKVAFANEDYLKTHLLNCKAHSLEKSQTVQSDATEIRQLELHLICSLCQYASSSKVELYAHMKDKHKFAVEPQFVCVSLRTMTTTFICSICMDVSENIDKFNEHWFSHYVKQPYFVCIYCNKDSNSVDAFKEHAKEHELATRQNISCNVKYRDAEHVCKICHVSVESEKLLNEHNVIHNPNDLIRRKGNEVTTQKSILKTILATKEPDKENKATEKQAVGCSKSVADLDKEKLISILEGNEDEDSENELVIDLAEYPENESAVKDRPEEKKVPSTLATLRLPAATLPVPTLPVPMSPVPTLPVPTLPVSTSPEPTLPTTELNAAVDSGIQTIVQNDVESKDVIDVKDESEKDEDPIKEAEASEPTKQKHGFLRVKALTELLEDTSNLFVCKVCNYSCETAEYLRQHYFTHITPKQPQPSQPEVPVFQQPASSTEQSRLVNKTLPGKKFIATGRTVQIPLLSKLYPGTATNAKLVASKLKPAGSSAQATTKTAYHKNLPACNIVRKIIVRRSAIESDGNVPTTMGEGSSDAQTTQIASTVDANNINHRGSVINATNSNKNPTGNFPLTKKNKAAVGFNNYIHKTCSKHYSRNSRAHDLSKYPQPQHLKKGVAEKNYNMGSDAAMRNDNVANGNQNYSRAQHNVQNQARMNSPASMYYQYPNSEHVYAGIDQGPMQSQQVMQQVPNHTVSRNLPPSYYYKNSTVGGMSIVINQAAPAVSNLSTVDIRQQQGHQPRIYPVYTNPVVPVDSQRYGQQRPQNIIDYSGTGEVYQVSPHEYRGPISEHITTRGRTIEPSANLTCPYCPNSPTFGTQEMFEFHLNVSHNYVCDLCGLLFYNIDDIRIHKIKHGLMDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00861510;
90% Identity: iTF_00861510;
80% Identity: -