Lcal008433.1
Basic Information
- Insect
- Lasioglossum calceatum
- Gene Symbol
- -
- Assembly
- GCA_963966675.1
- Location
- OZ016540.1:14153992-14182510[+]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-07 0.0064 16.4 0.5 44 128 104 188 101 199 0.64 2 2 2.2e-06 0.061 13.2 0.3 323 381 259 318 251 329 0.86
Sequence Information
- Coding Sequence
- ATGTTATTTGGCTTGGAAAGCGTCAGCTCTTGGGCTTCTGGATTAAGTCTGGGTCTATGGGGACAGAGAGATTTGCATGGTGCCACAGACGCCGCCGTCACGCGCCGATCCGGCTGGCGCAATATAGATGCCTGTCGGGGTAATTTCTGTCGTGTTGAACCCTGGCCACGGTTCGCCAAAGGGAAGATTGATAACCCCCGTGGTAGATTCACGAGCGTGGTCCAAGCCTTACGTGGCAAGAAACCGTACTTGGACGACGCAGCGGCGTGGTTTCTTCTATCGGCGTTGGCGGTGAACCCAGACGCGCAGGACAGCACGACGCAGCAGATCCAGTCGAAGCTGGGCAACTATTCCCTGGTGAAGCATCTGCTGGACGAGCCTAAGCGTTTGATCGGTATCGAGGGTGTTCCAGCGAGTCCGGCACCGTCGTCGGCGACCTCGTCGCTGCGAACGAGTTCGAGTTCGGTGGGCTCGAATTCCCGGAGTTCTCCATCCGGCCAAGAATTCAAGAAACCCGGTGGACCGAGAACAGGAGGCTCTTCGTCCTCTTCGTCGAGCCATCAGCGGGGTGGTTTCGTGAAGCCAGCGGATGGGAAGCCGCCTTATGGGGGCAGGGGTGGCTACCCTGGCCAACCGGTGAAGCACGGGGGCAACAGCAACGATCATCGCAGCCACGGTTTATTACCGGCCAAAGGACCGCCCCCGAACTCGCCCGGGAACGGCACGCTCGGCGGCAATTCGAGTATCGGGAATTCCGGCGGCAGCAGGCTTCACTCCGCCGCCAGCAGACTGTCCAGGTTACCTCTCGATAACGGGACAAGTTCGAGGCCGGTGCCCAACGAGAACTCCGCGGACCTGGAGATCATAATGAAGGAAATGACCGTGCCGTCCACGCCTCTGACGGCCATCGCCCAGACACCGAGGAAGGAGCTCGAGACGAAGTTCACGTTCAATCCCATGCTGGCGAAGTTGACCGAAGTGCCGCCTTCGGAGCCGACGAAGCCTCGTAAGTAA
- Protein Sequence
- MLFGLESVSSWASGLSLGLWGQRDLHGATDAAVTRRSGWRNIDACRGNFCRVEPWPRFAKGKIDNPRGRFTSVVQALRGKKPYLDDAAAWFLLSALAVNPDAQDSTTQQIQSKLGNYSLVKHLLDEPKRLIGIEGVPASPAPSSATSSLRTSSSSVGSNSRSSPSGQEFKKPGGPRTGGSSSSSSSHQRGGFVKPADGKPPYGGRGGYPGQPVKHGGNSNDHRSHGLLPAKGPPPNSPGNGTLGGNSSIGNSGGSRLHSAASRLSRLPLDNGTSSRPVPNENSADLEIIMKEMTVPSTPLTAIAQTPRKELETKFTFNPMLAKLTEVPPSEPTKPRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -