Basic Information

Insect: Lasioglossum albipes
Gene Symbol: -
Assembly: GCA_000346575.1
Location: KB640536.1:124531-134451[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 6.3e-06 0.00051 20.5 1.0 1 23 46 68 46 68 0.98

2 29 0.0081 0.65 10.7 3.6 1 23 91 114 91 114 0.96

3 29 0.00014 0.011 16.3 0.5 2 23 121 143 120 143 0.96

4 29 0.003 0.24 12.1 0.6 2 21 165 184 164 185 0.92

5 29 0.029 2.4 9.0 0.1 2 23 281 302 280 302 0.94

6 29 0.003 0.24 12.1 0.6 1 23 308 331 308 331 0.92

7 29 0.00012 0.0095 16.5 0.1 1 23 397 420 397 420 0.96

8 29 0.024 1.9 9.3 0.4 1 23 426 449 426 449 0.96

9 29 0.062 5 7.9 0.8 1 23 462 484 462 484 0.97

10 29 3.6e-05 0.0029 18.1 0.9 3 23 528 549 527 549 0.96

11 29 0.0013 0.11 13.2 1.0 2 23 609 632 608 632 0.95

12 29 3.1 2.5e+02 2.6 0.0 2 23 641 663 641 663 0.84

13 29 0.087 7 7.5 0.1 2 23 670 692 669 692 0.95

14 29 1.3e-05 0.0011 19.5 1.2 1 23 700 722 700 722 0.98

15 29 1.3 1e+02 3.8 2.9 2 23 749 772 748 772 0.94

16 29 0.00021 0.017 15.7 3.3 1 23 775 798 775 798 0.97

17 29 0.00063 0.051 14.2 0.6 2 23 805 827 804 827 0.96

18 29 0.00092 0.074 13.7 3.9 1 21 851 871 851 872 0.95

19 29 0.0027 0.22 12.2 1.8 2 23 886 907 885 908 0.93

20 29 0.44 36 5.3 1.4 1 23 911 934 911 934 0.94

21 29 0.038 3.1 8.6 1.0 2 23 941 964 940 964 0.89

22 29 3.1 2.5e+02 2.6 0.2 2 23 972 994 972 994 0.94

23 29 0.23 18 6.2 2.7 2 23 1032 1054 1032 1054 0.96

24 29 1.7 1.4e+02 3.4 0.1 2 23 1060 1082 1060 1082 0.95

25 29 0.00034 0.027 15.1 0.1 1 23 1145 1168 1145 1168 0.96

26 29 0.0071 0.57 10.9 2.5 1 20 1193 1212 1193 1214 0.93

27 29 0.5 40 5.1 1.3 2 23 1318 1340 1317 1340 0.94

28 29 0.29 23 5.8 0.2 2 23 1347 1369 1346 1369 0.94

29 29 4.8 3.9e+02 2.0 2.6 1 23 1380 1402 1380 1402 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	6.3e-06	0.00051	20.5	1.0	1	23	46	68	46	68	0.98
2	29	0.0081	0.65	10.7	3.6	1	23	91	114	91	114	0.96
3	29	0.00014	0.011	16.3	0.5	2	23	121	143	120	143	0.96
4	29	0.003	0.24	12.1	0.6	2	21	165	184	164	185	0.92
5	29	0.029	2.4	9.0	0.1	2	23	281	302	280	302	0.94
6	29	0.003	0.24	12.1	0.6	1	23	308	331	308	331	0.92
7	29	0.00012	0.0095	16.5	0.1	1	23	397	420	397	420	0.96
8	29	0.024	1.9	9.3	0.4	1	23	426	449	426	449	0.96
9	29	0.062	5	7.9	0.8	1	23	462	484	462	484	0.97
10	29	3.6e-05	0.0029	18.1	0.9	3	23	528	549	527	549	0.96
11	29	0.0013	0.11	13.2	1.0	2	23	609	632	608	632	0.95
12	29	3.1	2.5e+02	2.6	0.0	2	23	641	663	641	663	0.84
13	29	0.087	7	7.5	0.1	2	23	670	692	669	692	0.95
14	29	1.3e-05	0.0011	19.5	1.2	1	23	700	722	700	722	0.98
15	29	1.3	1e+02	3.8	2.9	2	23	749	772	748	772	0.94
16	29	0.00021	0.017	15.7	3.3	1	23	775	798	775	798	0.97
17	29	0.00063	0.051	14.2	0.6	2	23	805	827	804	827	0.96
18	29	0.00092	0.074	13.7	3.9	1	21	851	871	851	872	0.95
19	29	0.0027	0.22	12.2	1.8	2	23	886	907	885	908	0.93
20	29	0.44	36	5.3	1.4	1	23	911	934	911	934	0.94
21	29	0.038	3.1	8.6	1.0	2	23	941	964	940	964	0.89
22	29	3.1	2.5e+02	2.6	0.2	2	23	972	994	972	994	0.94
23	29	0.23	18	6.2	2.7	2	23	1032	1054	1032	1054	0.96
24	29	1.7	1.4e+02	3.4	0.1	2	23	1060	1082	1060	1082	0.95
25	29	0.00034	0.027	15.1	0.1	1	23	1145	1168	1145	1168	0.96
26	29	0.0071	0.57	10.9	2.5	1	20	1193	1212	1193	1214	0.93
27	29	0.5	40	5.1	1.3	2	23	1318	1340	1317	1340	0.94
28	29	0.29	23	5.8	0.2	2	23	1347	1369	1346	1369	0.94
29	29	4.8	3.9e+02	2.0	2.6	1	23	1380	1402	1380	1402	0.92

Sequence Information

Coding Sequence: ATGGATATGGAAACGAATCCAAGTGACTTTTTGGAGATGACTTCGATAGTCGCTGAGGAACCGGAAGACATAGAGTTGAAACATCAAGAACATTCTAATAATATTCCAGAGCATACATCTCAACAACACGAAGTTTATGTTTGTTCTTTGTGCAATAAAGCATTCAGTTCAAAGGGTCATTTATCTTTGCACGCGCGTATTCATGTCGGGGCTGGCGATGTAATTGGCGAAAAAGTTCTTACGGACGATCACACTTCCTATAAGAGGCCCTATCAGTGCGATCTTTGCCATAAATCTTATTCAACCGCGAAGCATCGTTGGGGTCACGTCTCAACATCTCACAGAGGCCACCCGGCAGTGACATGTGGCTATTGTTCCCGGATCTACTCGACTCGAACAAATTTAGAAGAACATATAAAATCACGTCACGCTGGTCTTCCAGCGCCCTTGGAGGTTCCTGTGAACAATACCTACCGACCAGAGAACAGATGCCAGTGTAATGTTTGCGGAAAGATTTGCACGGACGCCATGGAATTAAATCTCCATGGCAGAGTCTGCATCGAAGAGCAACGATCCGATTTCTTGCCCAAGAGCGAGAACAAGGATACTAAAATTGTAGACAGTTGCGAAGGGTCAAGCATTGGTAGTGATGAAGATAGCAAAGATTACAGAACTGCAGAAGCAAAACTAGCTAAGAATCCTCAATTAACGATCTTGAAGCAAGCACTGATGAAAGGTGATAGTCTTAAACGGGACTTCGAAGACAAACTAACGACAAATTGTAAACCAAAAAAACTGCCAAAAACAGAAAATACAGATGTTAAGAGCGATAAGAAATGGTACTGTGAGTCGTGTCCTCAATTTTTCACTTCGGTCGAAAGCTTGAAAGAACACGAAGCAATTCATGACGCTGATAAACCGTACATCTGTATTCTATGCAAAAAAGATTTCGTTCTTAAGTCTTCCTTGAGTAGACATATTCAAACGTTACATGGCGTTGATCCGTATCCTATTGTAGAAAGCGATAAATGTTTAAAGAAGATTCTTTCACGGCATTGGAATGAATCGATGGATCTCGACTATGAACGAAAACCTGCAGAATTCCCGTTATCCCCGGAGATGAATGCTGAAAACGAAGAGGACGATCACGAGAGCGGACAGGAAAATCTGATCGAAATTGAAACTGTATTTGTTTGCGAGATCTGTACCCGCGATTTTAACGATCGTGCCTCGCTTTGGCTTCACATTCGAGCCACACACAAAGAATTTGCAGCGTTCGCGTGCGGTGTTTGTTTGAAAATCTGTGCGGACAATACACAACTTTTGAATCACGTAAATATGTATCACGGTGGATCGAAATTGTTGCTCTCCGAACAAAGAAGGTACAGCTGTACAATTTGTGGCAGACAACATGACTCTAGAAAGAAATTAATCGCACACGTATCCATACATAACGTAGATCCAAATTATGATCCAGCAACCTTCGTGCAATTGAACAGTAACTATTACGGGGAGAATATCAATGGCAACGAAACTACGGAAACGATGCTCGACTACGAGGAGGAAGGAGACAAAGTAGACTGTTACATCTGTTACAAGTCATTCCCCAACGAAGACCATTTGATACGGCATCAGAGAAATGCACACAGATCCGAGCAGCCAATGCTGGCAGGAGACTCCTTAAATCAGTCGAATTTAAACGGTGGTGGTAACAGAGCTCAATACCACTTGTTCTTTGTTTGTGAACTCTGTGGCAGTTCGCATCCCAGTAAATGGGAACGTTGGTTACACGTGAGCTCGTCTCATGCGAACGAGCCAGCCATAAAATGTGATCGGGACGACTGTGGTAAAATTTTCGCTACAAAGTCACTTAGGAACGATCACATTCAACATCATGCGATTCAAGGACCCTCGCCGAACACGTGCGAAATTTGTGGTAAACTTTGGGGCAGCAGAGTGGATTACTGGAAGCACGTTATGGGCGTTCATTCGGATACCGTTCCATTAATTTGTGGTGTTTGTCTGAAGGTTTTCCCGAACGTGTTACAATTAAGTACCCACGTGAAATCGAAACATTGGCCATTAACAAACGGTGATTTCAGTTGTGATATATGCGGAAGACCGTATTCGAACAAATCGAAAATGTCTAGGCACAGAAAGATCCACGGTTTCGAGGAAACCTGCGACAACGGAGTTGAAAGTAACGAAAACAAACCGGACGGGCGAGTCAGAGAAACTGAATTAAGTTGTGAACATTGTACAGACTTAAAGTTCGCTAGTTTAGAGAAGTTGTGTAATCATAGACGAATTGTCCATGGCCTTTTCCCTTGCGATCTCTGTAATAAATGTTACGGGAGGACGTCGCACCTATGGAAACATGTTAATAGAGTCCATAAAGGTCACGAGGATGTTACCTGCCCATACTGCTTGAAAACCAGCGCGTCGAAAGATCATTTGGCTACCCATATCTCGAAAATTCACAGGTACGAACCTGATTCTAGAAAAGACGGAAAAGACACTAGGCAATTTAAAACCGACGAAGTTATCCTACATTATTGTGAGAAATGTAATAAAGGATTTCACAAGCGATACCTGTTGCGTAGACACATGAAAGGATGTCAGAATTATAGGAAGGACCCTGGCGCGTTGCTTACTCGTTGCAGAGCTTGCGAAAGAATTTTCAAGGACCGAGCTAGCTTACAGAAGCATATAGAAAATCACCATAGCACGTACACTTGTCATCTTTGCAATGAAACGATCACTTCGAAATTAGGAATTATGACGCACAACAGAGTGAAACATATGGATCATCCGGATTTGACTTGTAATTTCGGAGCTTGTAAAAAGTTGTTCAGGACAAAGGAAGATTTGGAATCGCATAAGAAAGATCACAGATATCACACGAATCCTAACGTTTGCGATTTCTGCGGCGACACTGTCGAGAATAAACTGAAATTGAAGATGCACGTGCTGTCTCTTCATCGTAACGAAATCGGAGTGTCTTGTGGAGTGTGTTTAATCCCAATGAAAGATCCGAAGGAGCTTAAGGGCCATGTAGAAGAAGTTCACTCCAGTGTTCTTTCCAAACCTAATACATGTCAAGTATGCGGTAAACAATATGCTTCGAAATGGAAAGCTTTCGACCATACTAAGAAATGCCATGGCAAGGTATTCCGGACCTGTAAACAATGTTTAGCTGTTTTCACAGAAGACTCCGCCATCAGAGATCATTATGAAACGGTACATAACGTTCCGAAAGATCAACTTGCGGCGTTCGAATACAGGTTGGACATCGGATCGAAACACGACGATTATGAAATTGAGTCCCCCGACATTATCGTGAAAGAAGAACCAGACGATTTGGAGTACGATGTAGATCTGTGCGACGAGGATTCCAGCGATTCGAAAAGGAGAAGATCGTTGACTGATACATTTGACTGTGAAATGTGTCCCGAGATGTTTGTGAATAGCGACGCCCTTTCGATGCACTATCGCAACATGCATAACACAGATCCGGAAAGAATGTTCAAGAGAATGAAGCAGGAAGAACAAAGAAGAATCCGCGGAAAACTAAGTTTCGCTTGTAAGAATTGTAAAAAACAATTTTGTACAAAGACGTTGTATTGGAACCATATTGGAACTTGCAGGAGAAACGCTTTGCGAAAAGAAGAGGAACTTTCGTCTTCGCAGAACGACATGTTGGATAATCAAGAAGGTGTGCTTGATAACCAAGAAGAAATTTTGAAAAATAATAATCAAATCAAGAAAGAAGAAAGTACATCGAACTTGAATATCCCAGACTTTAATCTATTCGAAGACATAAATCTTCAATTGTCAGGGCAAAGACCTCTTCCGAATCTGATGCCGCTATCTCAGAGGGTGAAATCGTCGATGAAATGTTCGAGAAAAGATTCGAGGAAAGTGTACGACGAATCAACGAACACAGAATGTGCTTGCGAAGTCTGTGGAAAACAGTGGCCAGCGAAGAAACATTTATGGCAGCATTTAATTCGCTTCCATCGAGCAGAAGCTGCGGTCACCTGCGGAGTGTGTCTGAAACTCTGCAAGGACTACGATGATTTAGCAGAACATTTAAAAGCTGCACACGCAGCGATCCTTTCTTGCGAAGGAAACAATTTCACGTGTAAAACTTGTGGCAGGTATCACAATGCACGCAGTAAGCTATTGTTACACACAAGCATTCATATCGGACACGCAAGCAATGGCACCACATGTCCGAAATGCTACAAGAATATTACTGATGAAACTGATCATTCTAATACGTGTACTGGAAAAACAGAAGAGGAGCATTTGAAGAACGAGAAGAAGCCAGAAGGAAGCCTGATAACGGACGATGCTATGATAGAAGAAGTGGAAGAAGGGGACTTCGAGTCTGAGGCGGAAGAGGCAGATTCAGCGGAATCAGATAGCGGTAGTAGCACGGAGGTAGAAGAAGAAGAAGACAATGATTCCGAAGGAGAATCCAGAGCCACAGGAGAGATTACGTACAATTCAGATACCGACGATGATTCCGAAGAATTGGGTAATCTCGAAATAGATAAGAATATGCAGCACTTCGCTTTGGAAGGTCTTCAGGAATCCAAAGATACTGAAACAGAGAAGAACGATGTTGATTTGTCCGACGATTACGGTCCTCCTGTGCTTAGCCCTATGATGCCTCTCCTAACTGGAAATATATCTGGAGAACCGTCGGTTGGCCGCAAACTTAGTTCACTTGGGACGATGGCGAACAAAGAAATGGGAATTTGTAACTTGGCAGAAATTCAAAATCAATCCTCTCCGAAATCAGTGAATTTCTACGACAAAAGTTTGTCTAACAATGAATTGTTGGATTTTGAATCTGAAGCATTTATGAATCGAAGCGAGGAGGAGTACGAAGACGGGAAAAACGAATACGATGAAAATTCTATGGAAGAGAATGAAGACAGCGGGGAGAATGATGGTAACGAAGAAGCAGCGGAGAACGAAGAAAACGAAGAGGTCGAGCAGAACGAGGATAACGAAGAGAGTCGTGAGATGGAGGTGAACGAGGACAGCGAAGGAAGCGAATTGTACGAAGAAACTGAAGATAATGGGGACAATGAGTCGAATGAAGAAATTGAAGATAACGAAGATAACGAGGACAACGAGGAACAAGAACAGAATTATGAGGACGACGAGAATGTAGAAAACGAAGAGAGCGAGGATAATGAAGAGAACGAGGAAAAAGTAGAAGGCATGCAATTGGATGATTTAGAGAATGCTGTACTAATGGTGACCGACGGAAATGGAATACTGATACAACAAGATATATTAGAGGATGGAATTGAGAACGTAAATCAAGCGTACGTTTATTCTACGATTGCTTACAGTACTGACGAAGACAGTGACGATGCGGGAAAATGA
Protein Sequence: MDMETNPSDFLEMTSIVAEEPEDIELKHQEHSNNIPEHTSQQHEVYVCSLCNKAFSSKGHLSLHARIHVGAGDVIGEKVLTDDHTSYKRPYQCDLCHKSYSTAKHRWGHVSTSHRGHPAVTCGYCSRIYSTRTNLEEHIKSRHAGLPAPLEVPVNNTYRPENRCQCNVCGKICTDAMELNLHGRVCIEEQRSDFLPKSENKDTKIVDSCEGSSIGSDEDSKDYRTAEAKLAKNPQLTILKQALMKGDSLKRDFEDKLTTNCKPKKLPKTENTDVKSDKKWYCESCPQFFTSVESLKEHEAIHDADKPYICILCKKDFVLKSSLSRHIQTLHGVDPYPIVESDKCLKKILSRHWNESMDLDYERKPAEFPLSPEMNAENEEDDHESGQENLIEIETVFVCEICTRDFNDRASLWLHIRATHKEFAAFACGVCLKICADNTQLLNHVNMYHGGSKLLLSEQRRYSCTICGRQHDSRKKLIAHVSIHNVDPNYDPATFVQLNSNYYGENINGNETTETMLDYEEEGDKVDCYICYKSFPNEDHLIRHQRNAHRSEQPMLAGDSLNQSNLNGGGNRAQYHLFFVCELCGSSHPSKWERWLHVSSSHANEPAIKCDRDDCGKIFATKSLRNDHIQHHAIQGPSPNTCEICGKLWGSRVDYWKHVMGVHSDTVPLICGVCLKVFPNVLQLSTHVKSKHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGFEETCDNGVESNENKPDGRVRETELSCEHCTDLKFASLEKLCNHRRIVHGLFPCDLCNKCYGRTSHLWKHVNRVHKGHEDVTCPYCLKTSASKDHLATHISKIHRYEPDSRKDGKDTRQFKTDEVILHYCEKCNKGFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSTYTCHLCNETITSKLGIMTHNRVKHMDHPDLTCNFGACKKLFRTKEDLESHKKDHRYHTNPNVCDFCGDTVENKLKLKMHVLSLHRNEIGVSCGVCLIPMKDPKELKGHVEEVHSSVLSKPNTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFTEDSAIRDHYETVHNVPKDQLAAFEYRLDIGSKHDDYEIESPDIIVKEEPDDLEYDVDLCDEDSSDSKRRRSLTDTFDCEMCPEMFVNSDALSMHYRNMHNTDPERMFKRMKQEEQRRIRGKLSFACKNCKKQFCTKTLYWNHIGTCRRNALRKEEELSSSQNDMLDNQEGVLDNQEEILKNNNQIKKEESTSNLNIPDFNLFEDINLQLSGQRPLPNLMPLSQRVKSSMKCSRKDSRKVYDESTNTECACEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCKDYDDLAEHLKAAHAAILSCEGNNFTCKTCGRYHNARSKLLLHTSIHIGHASNGTTCPKCYKNITDETDHSNTCTGKTEEEHLKNEKKPEGSLITDDAMIEEVEEGDFESEAEEADSAESDSGSSTEVEEEEDNDSEGESRATGEITYNSDTDDDSEELGNLEIDKNMQHFALEGLQESKDTETEKNDVDLSDDYGPPVLSPMMPLLTGNISGEPSVGRKLSSLGTMANKEMGICNLAEIQNQSSPKSVNFYDKSLSNNELLDFESEAFMNRSEEEYEDGKNEYDENSMEENEDSGENDGNEEAAENEENEEVEQNEDNEESREMEVNEDSEGSELYEETEDNGDNESNEEIEDNEDNEDNEEQEQNYEDDENVENEESEDNEENEEKVEGMQLDDLENAVLMVTDGNGILIQQDILEDGIENVNQAYVYSTIAYSTDEDSDDAGK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00218574;
90% Identity: iTF_00966151;
80% Identity: -