Basic Information

Insect: Lasioglossum albipes
Gene Symbol: -
Assembly: GCA_000346575.1
Location: KB640044.1:5606-10655[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.065 5.2 7.9 2.4 1 23 367 389 367 389 0.97

2 18 0.00072 0.058 14.0 0.6 2 23 427 448 426 448 0.98

3 18 0.0024 0.2 12.4 1.2 1 23 576 598 576 598 0.95

4 18 0.003 0.24 12.1 0.4 2 23 602 623 601 623 0.96

5 18 0.00013 0.01 16.4 3.3 1 23 708 730 708 730 0.97

6 18 0.00025 0.02 15.4 0.5 1 21 736 756 736 760 0.92

7 18 0.0019 0.15 12.7 3.5 2 23 837 858 836 858 0.96

8 18 0.00037 0.03 14.9 4.4 1 23 937 959 937 959 0.96

9 18 0.00033 0.027 15.1 0.7 1 20 964 983 964 985 0.94

10 18 0.049 4 8.3 0.5 2 23 996 1017 996 1017 0.97

11 18 3.4e-05 0.0027 18.2 0.6 2 23 1056 1077 1055 1077 0.97

12 18 3.1e-05 0.0025 18.3 1.6 1 23 1082 1104 1082 1104 0.95

13 18 0.00017 0.014 16.0 2.9 1 23 1110 1132 1110 1132 0.98

14 18 5.4e-06 0.00044 20.7 0.4 1 23 1148 1170 1148 1170 0.95

15 18 4.4e-07 3.5e-05 24.1 0.6 1 23 1176 1198 1176 1198 0.99

16 18 4.8e-05 0.0038 17.7 0.2 1 23 1204 1226 1204 1226 0.97

17 18 0.00018 0.014 15.9 4.1 1 23 1232 1254 1232 1254 0.96

18 18 0.013 1 10.1 0.4 1 20 1260 1279 1260 1281 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.065	5.2	7.9	2.4	1	23	367	389	367	389	0.97
2	18	0.00072	0.058	14.0	0.6	2	23	427	448	426	448	0.98
3	18	0.0024	0.2	12.4	1.2	1	23	576	598	576	598	0.95
4	18	0.003	0.24	12.1	0.4	2	23	602	623	601	623	0.96
5	18	0.00013	0.01	16.4	3.3	1	23	708	730	708	730	0.97
6	18	0.00025	0.02	15.4	0.5	1	21	736	756	736	760	0.92
7	18	0.0019	0.15	12.7	3.5	2	23	837	858	836	858	0.96
8	18	0.00037	0.03	14.9	4.4	1	23	937	959	937	959	0.96
9	18	0.00033	0.027	15.1	0.7	1	20	964	983	964	985	0.94
10	18	0.049	4	8.3	0.5	2	23	996	1017	996	1017	0.97
11	18	3.4e-05	0.0027	18.2	0.6	2	23	1056	1077	1055	1077	0.97
12	18	3.1e-05	0.0025	18.3	1.6	1	23	1082	1104	1082	1104	0.95
13	18	0.00017	0.014	16.0	2.9	1	23	1110	1132	1110	1132	0.98
14	18	5.4e-06	0.00044	20.7	0.4	1	23	1148	1170	1148	1170	0.95
15	18	4.4e-07	3.5e-05	24.1	0.6	1	23	1176	1198	1176	1198	0.99
16	18	4.8e-05	0.0038	17.7	0.2	1	23	1204	1226	1204	1226	0.97
17	18	0.00018	0.014	15.9	4.1	1	23	1232	1254	1232	1254	0.96
18	18	0.013	1	10.1	0.4	1	20	1260	1279	1260	1281	0.89

Sequence Information

Coding Sequence: ATGGACGCCGTAGGAATAAATACGTCCGATTCGGCGCAAAATGAGGAGGAAAGCATCGTGTCGACGGTGGAAATATGTCGTGTTTGTCTTCTGGGTAATCTAGTGATGCGGGACTTGTTTCTAGAGAACGAGGTTTCTTCTCTATCGGCGAAAGCGATGAGTTTTACAAACGTTAAGATGCTACCCGGCGATGGATTGCCAACGCGAGTATGTTGCGTATGCGCGGATAAACTTGAATCCGCGTACGAATTCAAGCTACAGGTGGAACAAGCTGACACGGTTCTAAGAGAGAAGTTTGTCACGATGAACATGAAGGAGGAATTATTTTTTAACGAAGTTGAAGTACACCTGGAGGTAGGAGAAAGAAACGAGGACATAGAACGGATGCATATAGAGAATCATTACGAAAACACGGTAGAAACATTGGAGACAATGTCCGGAGATGAAAAGTCATCCCTTTTGAAGGATCAGTTGGCTTTGTTGCAAGTGGGGAAGTTGGCTGAACAGGAACAAACGATAACTGAACAGCACGATAGTACGGTGATGGAAGAAGGGATCGTGTCGGAACAGATGTTGGATGAGTGTTCCAACAGAGAGGAAGATAACGGTAAGACTGTGGACATTATAACAAAGGACGAAATAATCCTGAAACACGAGAATATATCGACGGCAGAGCACGATTACATATTGCATCCAGACTGCATACTGGAAAACAATAGTCAACGAAAAGAAGGAACAGGGGAACAAGAAGAAGAACGAGAAGAGCAGCAGTTGATATCGGAAGAATCGTTTTCGCGCGACGATTGCGTACAGTATGTAAATATGTTGGTTAAAGCAGCTGACGTGACTCGTAAAGAAGACGGAGGAGACGTAGATCCGAGCGAAATCGAGCAGCCCGATAAAGAGGGTTCGAAAACAAATGCAAAGCTGGAAGCAGATTCTCAGTGTCAAAGCGAGACGAGAAGAAGCAAACGTAAGCTAGTTCAAAGTAGCATGCACTCCATGCGAGATTCCGACGAGGAGAATTATTTTGAAAACTTAAATCTAAGTTCGCGATTGAAGAAAGCCGAGGACTCCGATAAATCGGAAAGAATATTTTTCATGTGTTACCTTTGCGACAAAGAGTTTTTATCGAAAAACGTTTTACGGGAGCATATGCATTCCCACGAGGAAGTCCGAGAGGTATTGTCGTTGCGAAAATCCGTGGAAAAGCCAGAGAAAGATGTCGAAAGATGCAATAATCTCACGAAATTACCTCCATCTGGTAAAAGATCGAACAAATGCCCCTACTGCGGTAAACAATATATATACATAATATCGTTCAGCAAACATTTGAAGATGCACGAGAAAGAGAAAGAAGAAGCAAAAGAGGAATCGTTGCCGTTAGAAATATCGTTTCACGAAGATGAGCACAGTTTGGATTTCGAGGATTTTATGGATAAAGATAACATGAATTCTGAGTACCGAAAAAGAGTCAGGAAAAGAGAAGGCGTGGCTGTAACAAAATCGGAGAAAGAGGAACCAATGGTAGAGCAGACGGAGGAAGAGCAACAGGCAGAGGAGGAAGAAGCCGTAGACGCAGAAAAGAAGGAGTCCGAGGGAACCGGACGCGAGGAGAAAGCGAAACGGAAAGAAAAAGAGACAAGCAGCGAGGGTAAAGAAAGGATCTGTAATCGAAACGAAAATGGGGAACGAAAGAAACGCGAAGCACGCGTGGAATCGTCTTTCGCGTGCGACAAGTGTCTAGAAAAATTCTCTACTAGACGAGGTTTGCGAAAACACTCGATTTCGCATGTTACTCTCAGATGTAGCGTATGCGAAGAAGAGTTCGACTCGTTGGAGAAGCTGAGAAACCATCGGGCAAAGCATGTCGTTGAAGGTGTATTGTCCGAACAAGATCTGGAAACGGGTACGGAGTTTCCACTTGACAGGGATGAAGATGGCTGCCGGGTTGTCGGGGACAAACGGAAAGGAGAAGAACAGGTACAAGGACCTCACGAAGGAAAAAGGCGGAAAGAAAAGGAGGGGGAACGGGTACGGGAACGAGAAGCCCAGACACAATTGTCGGAGAACGTATTGAAGAGAAGCGCAAGAAACACGGAGATGCATTCGGAGGCCGAGTTCAGTTGTAAGGTATGCCATCAGCGATACACGAGAATGGATTTGTTGCAAAGGCATATGGAGCAACACGAGCGTATTAAAAATTACAAATGTACAGAATGCAATAAAACGTTCGGTAATGAACTGACTTTACGAAATCATCTTATAGCTACGAATCACAAAACTTTTGTCCGAGGACAGGAGTACGATCCAAACAAACGGATCAAACGAGTGGCTGCAAGAGCAGCTCAGAAAATAATTGATAAAATTAAGACGGAAGACGGTCTGGAAGATTACGAGGACGAGGATGAGCGGGAGGAGAAGATAGCCGAGCGTAAATCCACAGACGGAAGAAACAAGCGTGAGATTTTGTCACCGAAGAAACACAATTGCTCGAAAAAGGAGCTGGAATGCACGAGCTGTAACAAAAAGTGTAGCTCGAAACAGACGCTAGCGAAACACATGGAACAACACGTGAAGGAGGAGAAAACTGTCAAGGTGGAGAGAGAGAGGGAGAGAGAAAAAGAGAAGGAACGAGAGAGGGAGAGGGAGAGAGAAAGGCAAAGACAAAGGCAGGGCACCTTTGGCGACAAGAAAGAACGACAGAGGAGCTGCGCGAACAAGGACGCGGTTGAATCGAGCGAGGTCAACAAGGACGATGACTACGATTCAGATTTCGAAAGCGGGTTGGATTGGCCGATGGACAATCACGAATGCGTAAAGTGCAAGAAACGATACAGCACGAAGAAATCGTTGCTGCGCCATCAACTTTTGCACGAGGAACCGAACTTCGAATGCGACATTTGCAACGTGAAATTCTATCGTAAAGACAAGTTGAAAGCTCACTACGATAAGTGCTCGGAAAAGAACCCTGACCAGGTGAGAAAATGCAACATCTGCGGGGACAGTTTCGAAAATAACGAGATATTGCGAGAGCATAGATCGAAACACGTGACAGAAGGCATTCTCACCGAGGAGGACCTGAGGGATATCGAGCCGCGGCCAGAAGAGAAGAAGCCGGGAGAGAAGATCGGTAGGAAAAGAAGGACCGATATAGTGGGATTGGAGTGTACCGAATGCAACAAACAGTACACCTCTAGGAAAGGGCTACTGCGTCACATTCAGGTTCACGAAGGGAAGAAGTACCTTTGTGACATATGCCCGAAAAAGTTCTACAGAAGAGAACATTTGAAGATACACGTGGCCAAGCACAACATGATCAAACCGTACAAGTGTACGCGCTGTACGAAACGTTTCATCAAAGAAGAACAACTGACCAATCATTTGTCGAAACACGATCGAACATTTAAGAAGAATAAAGAAACTGATAGCTCGAAAAGATTTCTTTGCGAGATTTGCTCGAAAAGTTTCACCCAATCGACGACGTTGATCGCGCATCTCAGGGCTCACAACGGCATTAAACCATACGTTTGCGAGGTCTGTTCTCGACCGTTCACTACAAACGCCTATCTAAAGATGCACATGAGAACGCACACCCAAGAACGGCCGTACATTTGTCAGTACTGTTCGCGCGCTTTCGCCAGAGCCGACACGCTCGCAAATCACTTGACATCGCACACCGGCGAGGCCAAGTATCACTGCAAGTACTGTCCGAAAAACTTCCGTCGCCTGAAATCTCTGAAGGAGCACGTTTTCATTCACACGGGTCAAAGACCGTACGCTTGCCCGACTTGCGACCGCCGTTTCAATAACAACGGAAGTCGCTACGCCCATAGCAAGAGATGCAAACAAAATTTTGTTCAAAATCAGAATCGTGGCCAATCGTTGACGCAAGTACAATCTTCCCAGAATCAGCAAAGAATATTGCATCAGCAAACCACTCTTGCACAGACGCAACTGTTGAAAGCGCAGAACATTAAAACTATTACGATCACCAGACAACCAGATGCCGTTGCTGCTCAACACGTCGCGCAGCATCAAGAAATAATAATGCCCCTGATCTTTCCTTTGACCGTTACAGTCGCCGATATCAGCGAAGAAGTTATATTACCGGAAGGAACCAAATTGTTTACGACCACTTAA
Protein Sequence: MDAVGINTSDSAQNEEESIVSTVEICRVCLLGNLVMRDLFLENEVSSLSAKAMSFTNVKMLPGDGLPTRVCCVCADKLESAYEFKLQVEQADTVLREKFVTMNMKEELFFNEVEVHLEVGERNEDIERMHIENHYENTVETLETMSGDEKSSLLKDQLALLQVGKLAEQEQTITEQHDSTVMEEGIVSEQMLDECSNREEDNGKTVDIITKDEIILKHENISTAEHDYILHPDCILENNSQRKEGTGEQEEEREEQQLISEESFSRDDCVQYVNMLVKAADVTRKEDGGDVDPSEIEQPDKEGSKTNAKLEADSQCQSETRRSKRKLVQSSMHSMRDSDEENYFENLNLSSRLKKAEDSDKSERIFFMCYLCDKEFLSKNVLREHMHSHEEVREVLSLRKSVEKPEKDVERCNNLTKLPPSGKRSNKCPYCGKQYIYIISFSKHLKMHEKEKEEAKEESLPLEISFHEDEHSLDFEDFMDKDNMNSEYRKRVRKREGVAVTKSEKEEPMVEQTEEEQQAEEEEAVDAEKKESEGTGREEKAKRKEKETSSEGKERICNRNENGERKKREARVESSFACDKCLEKFSTRRGLRKHSISHVTLRCSVCEEEFDSLEKLRNHRAKHVVEGVLSEQDLETGTEFPLDRDEDGCRVVGDKRKGEEQVQGPHEGKRRKEKEGERVREREAQTQLSENVLKRSARNTEMHSEAEFSCKVCHQRYTRMDLLQRHMEQHERIKNYKCTECNKTFGNELTLRNHLIATNHKTFVRGQEYDPNKRIKRVAARAAQKIIDKIKTEDGLEDYEDEDEREEKIAERKSTDGRNKREILSPKKHNCSKKELECTSCNKKCSSKQTLAKHMEQHVKEEKTVKVEREREREKEKERERERERERQRQRQGTFGDKKERQRSCANKDAVESSEVNKDDDYDSDFESGLDWPMDNHECVKCKKRYSTKKSLLRHQLLHEEPNFECDICNVKFYRKDKLKAHYDKCSEKNPDQVRKCNICGDSFENNEILREHRSKHVTEGILTEEDLRDIEPRPEEKKPGEKIGRKRRTDIVGLECTECNKQYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMIKPYKCTRCTKRFIKEEQLTNHLSKHDRTFKKNKETDSSKRFLCEICSKSFTQSTTLIAHLRAHNGIKPYVCEVCSRPFTTNAYLKMHMRTHTQERPYICQYCSRAFARADTLANHLTSHTGEAKYHCKYCPKNFRRLKSLKEHVFIHTGQRPYACPTCDRRFNNNGSRYAHSKRCKQNFVQNQNRGQSLTQVQSSQNQQRILHQQTTLAQTQLLKAQNIKTITITRQPDAVAAQHVAQHQEIIMPLIFPLTVTVADISEEVILPEGTKLFTTT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00865472;
90% Identity: iTF_00865472;
80% Identity: -