Basic Information

Insect: Laothoe populi
Gene Symbol: -
Assembly: GCA_905220505.1
Location: HG992151.1:7561269-7569280[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 7.9 7.5e+02 1.9 1.0 1 23 172 195 172 195 0.95

2 21 0.18 17 7.1 2.8 1 23 202 225 202 225 0.96

3 21 4.6 4.4e+02 2.6 4.3 1 23 308 330 308 330 0.97

4 21 0.0032 0.3 12.6 1.2 2 23 336 357 335 357 0.97

5 21 2.6 2.4e+02 3.4 1.4 1 23 363 385 363 386 0.94

6 21 0.13 12 7.6 3.4 2 22 614 634 613 634 0.96

7 21 4.3 4e+02 2.7 1.0 1 23 732 754 732 754 0.82

8 21 0.66 62 5.3 0.3 2 23 890 911 889 911 0.96

9 21 0.42 39 5.9 0.2 2 23 991 1012 990 1012 0.96

10 21 0.14 13 7.5 2.2 1 23 1020 1042 1020 1042 0.98

11 21 0.19 18 7.0 3.2 1 23 1080 1102 1080 1102 0.95

12 21 0.00039 0.037 15.5 3.8 1 23 1110 1132 1110 1132 0.99

13 21 0.3 28 6.4 2.6 1 23 1217 1239 1217 1239 0.98

14 21 0.058 5.4 8.6 2.1 1 23 1295 1317 1295 1317 0.93

15 21 0.12 11 7.6 0.1 1 23 1323 1345 1323 1345 0.95

16 21 0.022 2.1 10.0 0.6 1 23 1415 1437 1415 1437 0.93

17 21 0.0049 0.46 12.0 0.4 1 23 1443 1465 1443 1465 0.96

18 21 0.0084 0.79 11.3 2.6 1 23 1555 1577 1555 1577 0.97

19 21 0.00021 0.02 16.3 1.4 1 23 1583 1605 1583 1605 0.99

20 21 2.3 2.2e+02 3.6 2.0 1 23 1696 1718 1696 1718 0.96

21 21 0.0035 0.33 12.5 3.7 1 23 1729 1751 1729 1751 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	7.9	7.5e+02	1.9	1.0	1	23	172	195	172	195	0.95
2	21	0.18	17	7.1	2.8	1	23	202	225	202	225	0.96
3	21	4.6	4.4e+02	2.6	4.3	1	23	308	330	308	330	0.97
4	21	0.0032	0.3	12.6	1.2	2	23	336	357	335	357	0.97
5	21	2.6	2.4e+02	3.4	1.4	1	23	363	385	363	386	0.94
6	21	0.13	12	7.6	3.4	2	22	614	634	613	634	0.96
7	21	4.3	4e+02	2.7	1.0	1	23	732	754	732	754	0.82
8	21	0.66	62	5.3	0.3	2	23	890	911	889	911	0.96
9	21	0.42	39	5.9	0.2	2	23	991	1012	990	1012	0.96
10	21	0.14	13	7.5	2.2	1	23	1020	1042	1020	1042	0.98
11	21	0.19	18	7.0	3.2	1	23	1080	1102	1080	1102	0.95
12	21	0.00039	0.037	15.5	3.8	1	23	1110	1132	1110	1132	0.99
13	21	0.3	28	6.4	2.6	1	23	1217	1239	1217	1239	0.98
14	21	0.058	5.4	8.6	2.1	1	23	1295	1317	1295	1317	0.93
15	21	0.12	11	7.6	0.1	1	23	1323	1345	1323	1345	0.95
16	21	0.022	2.1	10.0	0.6	1	23	1415	1437	1415	1437	0.93
17	21	0.0049	0.46	12.0	0.4	1	23	1443	1465	1443	1465	0.96
18	21	0.0084	0.79	11.3	2.6	1	23	1555	1577	1555	1577	0.97
19	21	0.00021	0.02	16.3	1.4	1	23	1583	1605	1583	1605	0.99
20	21	2.3	2.2e+02	3.6	2.0	1	23	1696	1718	1696	1718	0.96
21	21	0.0035	0.33	12.5	3.7	1	23	1729	1751	1729	1751	0.98

Sequence Information

Coding Sequence: ATGAAAAACTCGAAACATGAAATCGGTTGGACCCTCCGCCGCCCGACCCGCGCCCACGCGCCCTCGACCGACCCGCTGCGCCGACCGCCGACCGCCAGCCGCCACGGCCGCTCATCGGCTGCTTCGCCGTCATGCCCATGCCGCCTGCCTCGGACCGCGCTGAGCGCTCGACACTCGAAACTCAACTCGGCGGAGTCGGCGGTCCCTTCATTCAGCCGGCGACGCTCTCGCGCACCGCACACGTGTCCGCTGCAGCGCGCCGCGATACACTCCGACACCCTTCGTCGCGACACGTATATCTCGCCCCCCCGGAACGTTTCACCGACACTAAGTATTATTTTGTTGCAGCAGAGTATGCTCCAGCAGATGTCCTCGCCATCGAGCGCACAATTAGGCGAGGTCGCGGCTATCGTGCGCACCTTCGAAAGCCGCGTCTGCGGCGAAGTATCTTCGGGGGCCTCTTCGGATGCCGCCGAAGATTTCGAATTGCCACACTGCAAGATAAGAAGAAATTATAGTTGCATGAAGTGCACGTATTACACGCAGAATCCGCGCGCTTATCTTATGCACACACGCGACGTTCATTTCGTGAGGCTGAAGATTTTTGATTGTCCACATTGCCTTTACGCTTCAAGACACTATCAAAAACTTGTGAGGCACGTAAAAATGGTACACGGAGGATCTACATCAGAGGCGTCTACTAAAGTAGAACCAGAAATTCCCACACAGGTTTGCGACGCCGGAAATATCTCGGAACGGATGGAAGATATGGTAGAAGAAATAGAAGACAACGAGGACATACAGATGGAAGTTGATGACAACAATGAAGAACAAATCGAGCGTTCCGATGATGCAGATATTGAAATTGAGAGGATTGCAGAACGAAGTACATTAAATACACCAAAAAATAAGGGGAACTTTTTCTCATGCGATAAGTGTAATTATGTGACACATTTACGGGCTAGGTTCACAAAACACGTCAAGTATCATTCTATGCCAATGATCAAGTGCACCACGTGTGACTTTCGGACACCTTACAAGTGGAACTTGGATCGTCACATGAAGAACCATGGTGGCAGCGGCAGTTTTAATTGTTCTATGTGCAACTTTACAGCAGACATTAAACAAAGTTTAACAGTGCACGAAATGAATCATCACACGCCGCCAGTGGGTTGTACTGTTGCTAATCGTCGCCGCAATCGCGTTGGCGCGAGTGACATATCGCTAGCCGAAGCAGCCAACGCGCTGCTCCCCAAGGAGGAAGAAGGGAGCAGCGATTCACGATCCTCCCATTCGGCATCGGAAATGGGGCTTCATTACTCCGAAAAAGATATAATGACATCGAATAGTGACTCCAACGACGCATCAGTATCAGGAACTGGATTGAAAGAACAATCTTCAGATCAAATTTCGTCAACTACTCATGACTCGATGCATAAACAATGCAAGAGAACTCCAAGACCCATACCTCAGCTTATACCACTAAACGCCTCAACGCCTAATCAAAGCAAAACGTCGCCGGGAGAACCACCAGCCAAAAAATTCAAAGATTCCATAAATGAAACGTTTAATACAAACGTTGATGGTAAATCGGAAAGCCTGTCGTTTGTCCCTTCAATAAATGCAAAAGAAACTGGAATTCGAAAGAAAAATGAGTCATTTTTCGATCGACTCAAAGAGAGGCTTCTAACGGAGACTGGAGAAAATGGATCACTAACGTGTAAAAATTGTGGCTTTGAAAGTAAATGTTTATCAGAACATTCAGTTCATGAAAAAAACTGCTCATTATTAGGAAATCGCACAACCACAAATACGCTAATGTCTAGTTTAAGTTCAACACGGTGTCAAAACTGTAGGCATAGATGCAAATCAAGCGCAGATTTACTTGTTCATATGAAAACCTGCAGAAGAGCCGAGAAAACCACAGATGGAACTTTTGAAGATCCGAAAGGTCAAGAAAACAGTGAAATGTCATCGAAAATAGAAAAGGAAACTGAACCGCATCCCATGGAAAATGTAGTTTTTGTTTGGAACAATATAAATCATGACACATCCAAATTCGAAACACCGTTGGATATCAACATAAATGACGATTCCACGATGCCAGAAATGACAAGAACCTTTGAAAATGACACAGTTGACGAAAATGAAAGCATGAATTTATCACCAAGTCAAGCTGTcggaaaaaatgtatttaaatgtcCGCATTGTCCTTTCTGGGCCTCGACCGCATCCAGATTTCATGTTCATATTGTcggacatttaaataaaaagccaTTTGAATGTTCTCTATGCAAGTATAAGTCTAACTGGCGTTGGgacataacaaaacatattaagCTGAAGTCTGCCAGAGACCCTGAGCATAATGATGCCAAAGTGCTTATGACTGATGAAACTGGTAGAAGAAATTATAGTAAATATAGCAAGTTCTTGGCCATGCCAGTTTTAAATGAGAATGGCGAAAATGAATTTCATTACCTAGACTCAAATACAGCAGTCGATGCTTCGATGGaagtcgatgaatcattcagtGACGCGAACGACGGTACAAACACACCAGCTGAAATGCAACCTCTCAACCTACAGACTCAACACATCGAACTTAAATTTGACGCATTAGATATGAGGCATTCAGATggcaaaaaagtaaaaaaaacattatggaaatgcaaaaaatgcaattatagAGATCCATCGAAAGAGGCTCTATTGGAACATGTTCGAGAGCACTCAAGAGTAGATGGTAATGATGACGACCCAAAAAATCTTAGTGGAAAGAAACCTGAAAACATACCTGATCCATCAGACTTAGCGTACCGCTGTGGTCACTGCAATCAACTGTCAAACTGGAAACATGTTATACAGCGCCATTGCCGATTGAAGCACGAAGGTGTTATTAAAGTCATTACTACGGTAAAACCAAAATCGGATCCCACAGCCTCTGCTGCAAATGACTCTAACAATGATAGATGCCCAAAATGTCCATATAGAGCAAGCGACAAGAACATTCTTTTAACGCACATACAGCAACATCAGCCATCCACGCACTCCATATTCAAATGCTACTTCTGCCCATACTTCGTTAAGGATGAATGTGAGTTAATACAACACCTGCAACTACATGGTGTCACAGACCCGGAAGACTATATTTCTAAGGCCATGGGATGTAGATCTCCATTGCCGGAACCGCAAGCCGTACTACCATCAATAAACCATTCAGGCAGCACTAAACGACATAGATGTACAGAGTGTCCTTACGAGACCAATAGTAAATCCCAATATATGTATCACGAACAGTTCCACAGATTGCCTCCAGACACTCCATATAAATGTCCTGTATGTAACTACAGTGTATCCAAACGTCATTTACTTCATCAACATTTAAGAGTACACGGTATTATTCCGAAGAAAAATGAAACAGAGGCCGAGTTAGAAGCCACACCGTCATCCCAAAAGATAGAAAACAATTCTGACGTGGCTGCCAACAACCTAGATGAGATCCCATTTGTTTGGGTTTCGGCGAAAAATGAATtccataaaatgtataaatgtcGTTACTGTTCGTACGTAAACTCCCAAAAGTGTAAAATACCCAACCACGAAAAAATTCACTGTTTTACTTTTGAAAATAGTGACGTAACTGTCTATAAATGTTTAGAATGCAAATTCACTTGCGATAACTCAGGAAGATTAGCCGAACATTCCAAATCTCACGGTGAAATATACGGTCGAATTTATTGCCCGGTTGAAAATGATATTCCCGACGAAGAACAAGTATCAAAACTACGCAAAGTTATTGAActtgaaaaatcaaataatactgAAGTATCGCCTAAAGAAGAATACACAACTAGTGAAAACaaggaaattaaaatattacatttctgTACAAAATGCCCGGCTAGATATTTTACTGAGAGTGAATTAAAAGCACACGAAAACTTTCACGAATccacatatttatataaatgtaataattgtgATTTCACAGTACCAGAAGAAGATGAACtaatgttacataatattattcactCGGATGAATACCACACAAAAACCAAAATGCTTAAATTTGTTCATAACGTACATCCCGCCTATAAAGAGCCTCGGTTGGAACTAGTTCATTGTCACGATACCCTAGAAGCAACGTGGGTAGTGAATCCCAACAAGCACAATGAAAATGagcataatattgaaataattactAAGAAACATAACGAGCCAAAACACACACCCAAACAATATTATTGTAAAGAATGTCCGGCTAAGTTTTTTAAGAGTTCTGCACTAAGTTATCACGTGGGTTTACATGGCGGAGAAGGtgattataaatgtaaaaagtgCTCCTATGCTGTAAAGAACATCGGAAATTTAGCAAAACATGAACTACTTCATGAACAAGAAAACAAAGCAAGCAATTGTGATTACGAATCCGGCGAAGATGTGGACTATAAAAATGTTCCAATATCAGGAACCGATCTATTTCAAAGAAAAACTGAAGCACAAAAGAGAGTGTTAATTGATAAAGACAAGTTAGTTAAACCAAATGATCATTTTCCACCAGTGCTTCAAGCTGATCCACAGTTCGGTTATCTTATGCATGGTAATCCAGAATTCATATAcccaacatatttaaaaaatggacGCCAAAAAGAAAAACGATACAAATGCCACAAATGTCCCTCAGCATTTGAAAAACGGGAGCAATATAAAATTCACCTTTCTTTGCACGGATCAAAACAACGCTATAAATGTGAACTGTGTGATTACTCTGTAAAGTATTATGCTAATTATGTCCAACACATGAGAAAACACCAAATGAACGACGAAGCACAAGCTGAAAGAAAAAAAGGCTGTAGTGGTTTTTCGGAATCCGAAAACCACGATGTTAAACAAGAAGACAGTTCTGACAATATAAAGTTAGCTATAAAAACAATACCTAGAGGAACACCTAGAAGTGATTTTCAACAATTCTCCATAAGAGATCAACAAACCCTTCGATTATTACAGCGCAGACGATCTATACACAACTCTGGAAAAGAAACCAACATATCAGAACCATCTCCAACAAAAGAACGAAAATTGCACATGTGTTTACTATGCCCATACACAAACCAGCGGCAAGATGCTTTGAGCAACCACTACAAGCGCCACGATGACACCGATGTACTAACCTCGGGGAACCATAAGTGCTCTTACTGTGACTTGGTGGTTGTACAGTCACACTTCCTCAGAGAACATTTGAAAACGCATTTCAACTACCACAAAACTCTCACACCTGAATGTTTTGTGGCCAACGAAGACGTTAGTTTTACCATAACAAAAATAGACGAAAAAAGTGAGCCAGTTGATCTCAAATtagattttcaaaataaaagttataaatgcAATGATGACAAAATGTTTGTCAAAATGAACACCGGAGAGTTATTGGTAGAGTAA
Protein Sequence: MKNSKHEIGWTLRRPTRAHAPSTDPLRRPPTASRHGRSSAASPSCPCRLPRTALSARHSKLNSAESAVPSFSRRRSRAPHTCPLQRAAIHSDTLRRDTYISPPRNVSPTLSIILLQQSMLQQMSSPSSAQLGEVAAIVRTFESRVCGEVSSGASSDAAEDFELPHCKIRRNYSCMKCTYYTQNPRAYLMHTRDVHFVRLKIFDCPHCLYASRHYQKLVRHVKMVHGGSTSEASTKVEPEIPTQVCDAGNISERMEDMVEEIEDNEDIQMEVDDNNEEQIERSDDADIEIERIAERSTLNTPKNKGNFFSCDKCNYVTHLRARFTKHVKYHSMPMIKCTTCDFRTPYKWNLDRHMKNHGGSGSFNCSMCNFTADIKQSLTVHEMNHHTPPVGCTVANRRRNRVGASDISLAEAANALLPKEEEGSSDSRSSHSASEMGLHYSEKDIMTSNSDSNDASVSGTGLKEQSSDQISSTTHDSMHKQCKRTPRPIPQLIPLNASTPNQSKTSPGEPPAKKFKDSINETFNTNVDGKSESLSFVPSINAKETGIRKKNESFFDRLKERLLTETGENGSLTCKNCGFESKCLSEHSVHEKNCSLLGNRTTTNTLMSSLSSTRCQNCRHRCKSSADLLVHMKTCRRAEKTTDGTFEDPKGQENSEMSSKIEKETEPHPMENVVFVWNNINHDTSKFETPLDININDDSTMPEMTRTFENDTVDENESMNLSPSQAVGKNVFKCPHCPFWASTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNDAKVLMTDETGRRNYSKYSKFLAMPVLNENGENEFHYLDSNTAVDASMEVDESFSDANDGTNTPAEMQPLNLQTQHIELKFDALDMRHSDGKKVKKTLWKCKKCNYRDPSKEALLEHVREHSRVDGNDDDPKNLSGKKPENIPDPSDLAYRCGHCNQLSNWKHVIQRHCRLKHEGVIKVITTVKPKSDPTASAANDSNNDRCPKCPYRASDKNILLTHIQQHQPSTHSIFKCYFCPYFVKDECELIQHLQLHGVTDPEDYISKAMGCRSPLPEPQAVLPSINHSGSTKRHRCTECPYETNSKSQYMYHEQFHRLPPDTPYKCPVCNYSVSKRHLLHQHLRVHGIIPKKNETEAELEATPSSQKIENNSDVAANNLDEIPFVWVSAKNEFHKMYKCRYCSYVNSQKCKIPNHEKIHCFTFENSDVTVYKCLECKFTCDNSGRLAEHSKSHGEIYGRIYCPVENDIPDEEQVSKLRKVIELEKSNNTEVSPKEEYTTSENKEIKILHFCTKCPARYFTESELKAHENFHESTYLYKCNNCDFTVPEEDELMLHNIIHSDEYHTKTKMLKFVHNVHPAYKEPRLELVHCHDTLEATWVVNPNKHNENEHNIEIITKKHNEPKHTPKQYYCKECPAKFFKSSALSYHVGLHGGEGDYKCKKCSYAVKNIGNLAKHELLHEQENKASNCDYESGEDVDYKNVPISGTDLFQRKTEAQKRVLIDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKGCSGFSESENHDVKQEDSSDNIKLAIKTIPRGTPRSDFQQFSIRDQQTLRLLQRRRSIHNSGKETNISEPSPTKERKLHMCLLCPYTNQRQDALSNHYKRHDDTDVLTSGNHKCSYCDLVVVQSHFLREHLKTHFNYHKTLTPECFVANEDVSFTITKIDEKSEPVDLKLDFQNKSYKCNDDKMFVKMNTGELLVE*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01359347;
90% Identity: iTF_01010894; iTF_00341818;
80% Identity: -