Basic Information

Insect: Clanis bilineata
Gene Symbol: -
Assembly: GCA_036417725.1
Location: CM071140.1:6439931-6447093[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 7.5 5.1e+02 2.0 1.0 1 23 54 77 54 77 0.95

2 21 0.17 11 7.2 2.8 1 23 84 107 84 107 0.96

3 21 4.4 3e+02 2.7 4.3 1 23 188 210 188 210 0.97

4 21 0.003 0.21 12.7 1.2 2 23 216 237 215 237 0.97

5 21 2.4 1.7e+02 3.5 1.4 1 23 243 265 243 266 0.94

6 21 0.12 8.1 7.7 3.4 2 22 498 518 497 518 0.96

7 21 4.1 2.8e+02 2.8 1.0 1 23 616 638 616 638 0.82

8 21 0.62 42 5.4 0.3 2 23 774 795 773 795 0.96

9 21 0.026 1.8 9.7 0.2 2 23 875 896 874 896 0.97

10 21 0.13 8.8 7.5 2.2 1 23 904 926 904 926 0.98

11 21 0.18 12 7.1 3.2 1 23 964 986 964 986 0.95

12 21 0.00028 0.019 15.9 4.0 1 23 994 1016 994 1016 0.99

13 21 0.93 63 4.8 2.7 1 23 1101 1123 1101 1123 0.98

14 21 0.14 9.7 7.4 1.7 1 23 1179 1201 1179 1201 0.91

15 21 0.0011 0.076 14.0 0.6 1 23 1207 1229 1207 1229 0.98

16 21 0.077 5.2 8.3 1.7 1 23 1299 1321 1299 1321 0.92

17 21 0.017 1.1 10.3 1.1 1 23 1327 1349 1327 1349 0.96

18 21 0.0079 0.54 11.4 2.6 1 23 1439 1461 1439 1461 0.97

19 21 0.0002 0.013 16.4 1.4 1 23 1467 1489 1467 1489 0.99

20 21 0.87 59 4.9 2.2 1 23 1580 1602 1580 1602 0.96

21 21 0.0033 0.23 12.5 3.7 1 23 1617 1639 1617 1639 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	7.5	5.1e+02	2.0	1.0	1	23	54	77	54	77	0.95
2	21	0.17	11	7.2	2.8	1	23	84	107	84	107	0.96
3	21	4.4	3e+02	2.7	4.3	1	23	188	210	188	210	0.97
4	21	0.003	0.21	12.7	1.2	2	23	216	237	215	237	0.97
5	21	2.4	1.7e+02	3.5	1.4	1	23	243	265	243	266	0.94
6	21	0.12	8.1	7.7	3.4	2	22	498	518	497	518	0.96
7	21	4.1	2.8e+02	2.8	1.0	1	23	616	638	616	638	0.82
8	21	0.62	42	5.4	0.3	2	23	774	795	773	795	0.96
9	21	0.026	1.8	9.7	0.2	2	23	875	896	874	896	0.97
10	21	0.13	8.8	7.5	2.2	1	23	904	926	904	926	0.98
11	21	0.18	12	7.1	3.2	1	23	964	986	964	986	0.95
12	21	0.00028	0.019	15.9	4.0	1	23	994	1016	994	1016	0.99
13	21	0.93	63	4.8	2.7	1	23	1101	1123	1101	1123	0.98
14	21	0.14	9.7	7.4	1.7	1	23	1179	1201	1179	1201	0.91
15	21	0.0011	0.076	14.0	0.6	1	23	1207	1229	1207	1229	0.98
16	21	0.077	5.2	8.3	1.7	1	23	1299	1321	1299	1321	0.92
17	21	0.017	1.1	10.3	1.1	1	23	1327	1349	1327	1349	0.96
18	21	0.0079	0.54	11.4	2.6	1	23	1439	1461	1439	1461	0.97
19	21	0.0002	0.013	16.4	1.4	1	23	1467	1489	1467	1489	0.99
20	21	0.87	59	4.9	2.2	1	23	1580	1602	1580	1602	0.96
21	21	0.0033	0.23	12.5	3.7	1	23	1617	1639	1617	1639	0.98

Sequence Information

Coding Sequence: ATGCTCCAGCAGATGTCCTCGCCATCGAGCGCACAATTAGGCGAGGTCGCGGCTATCGTGCGCACCTTCGAAGGCCGCGTCTGCGGCGAGGTATCTTCGGGGGCCTCTTCGGATGCCGCCGAAGATTTTGAATTACCACACTGCAAGATAAGAAGAAACTACAGTTGCATGAAGTGCACGTACTATACGCAGAATCCGCGAGCTTATCTTATGCACACACGCGACGTTCACTTCGTGAGGCTGAAGATTTTTGATTGTCCACATTGCCTTTACGCTTCGAGACATTATCAGAAACTCGTGAGACACGTGAAAATGGTTCACGGGGGATCAACGGCCGAAGCGTCGACTAAAGTAGAACCCGAAGTTTCCGCATCGGCTTGCGACGCCGGAGATAGCTCGGAACGGATGGAAGACATGGTGGAGGAAATTGAAGATAACGACGACATACAGTTGGAAGTGGATGACGTTGAAGAACCCGAGCGTTCTGATGATATCGATACTGAAATTGAGAGAATTCCAGAACGAAGTACATCAAACACTCCGAAGAATAAAGGGAACTTCTTCTCATGCGACAAATGCAATTACGTGACACATTTACGCGCCAGGTTCACAAAACACGTCAAGTATCACTCAATGCCGATGATCAAATGCACCACATGCGATTTTCGCACACCTTACAAATGGAACTTGGATCGTCACATGAAAAACCACGGCGGCACCGGAAGTTTCAACTGTTCTATGTGTAATTTTACAGCAGACATTAAACAGAGTTTAACAGTCCACGAAATGAATCATCACACACCGCCAGTGGGTTGTACGGTCGCCAGTCGTCGCCGCAATCGTGTTGGCGCGAGCGACGTTTCGCTAGCCGAAGCGGCCACCGCGCTGCTCCCCAAGGAGGAGGATGGTAGCAGCGATTCACGCTCATCACATTCGGCCTCGgaGATGGGCCTTCAGTATTCAGAAAAAGAAATAATGACTTCAAACAGTGACTCCAATGATGCATCCGTGTCTGAAACTGGATTGAAAGAACATTTGTTAGTAGATCATGCCCAAGCAAATAACGCAAGCACACACGACTCAGCGCAAAAACAATGCAAGAAAACTCCAAGACCCATTCCTCAACTTATACCACTAAATGCATCAACACCTAATCAAAGCAAAACATCGCCTGGAGAACCACCGGCAAAGAAATTTAAagaatcaataaatgaaacatttAACGCAAACTCAGACAGTAAATCGGAAAGCCAATCGTTTGTCCCTTctataaatgcaaaagaaacTGGAACTCGAAAGAAAAATGAGTCATTTTTCGATCGACTAAAGGAGCGGCTTCTCACTGAGACTGGAGAAAACGGATCACTCACGTGCAAAAATTGTGGCTTTGAAAGTAAATGTCTATCCGAACATTCGGTTCATGAAAAAAATTGCACGTCATTAGGAAATCGCAGTACCCCAAACACTTTAATGTCCAGTTTAAGTTCGACACGATGTCAAAACTGCCGACATAGGTGCAAATCAAGCGCAGATTTACTTGTTCACATGAAAACCTGCAGAAAGGCCGAGAGAATGGGAGATGCTACTTTTGATGACCCGCAAAGTAGGGACAACAGTGAACTATCTTCCAAAATAGAAAAGGAAGCTGAACCACACCCTATGGAAAACGTAGTATTTGTTTGGAATAATATAAATCATGACGCATCTAAATTTGATACACCATTAGACATAAACATAAACGATGATTCCACTCTACCAGACATGAGAAAAAGCTATGAAAACGATACGGTTGATGATAATGAAAGTATGAATTTATCACCTAGCCAAGCTGCCGGTAAAAATGTGTTTAAGTGTCCGCATTGTCCATTTTGGGCCTCGACTGCATCTAGATTTCATGTTCACATTGTCGGACATTTAAATAAGAAGCCGTTTGAATGTTCCCTGTGCAAATATAAATCTAATTGGCGATGGGACATTACAAAACATATTAAACTGAAGTCGGCTAGAGACCCTGAGCATAATGATGCTAAAGTGCTAATGACTGACGAAACAGGCAGAAGAAATTATAGTAAATACAGTAAGTTCTTGGCTATGCCAGTTTTAAATGAGAACGGTGAGAATGAATTTCATTACTTAGACACAAATACAGCGGCCGATGCTTCGATGGAAGTTGATGAATCGTTCAGTGATGCGAACGACGGTACAAACACATCAGTCGACATGCAACCGCTTAATCTTCAAACACAACATAGTGAACTCAAATCAGATGTATTGGATATGCGGCACGCAGATAGCAAAAAAGTGAAAAAAACTTTGTGGAAATGcaaaaaatgcaattacagAGATCCGTCAAAAGAGGCGTTATTGGAACATGTTCGAGAGCATTCAAGAGTAGAGGGCAatgatgacgacccgaagaaccTAAGTGGAAAGAAAACTGACAACATGCCAGATCCTTCAGACTTAGCATATCGTTGCGGCCACTGCAATCAATTATCTAATTGGAAACATGTCATACAGcgcCATTGCCGTTTGAAGCATGAAGGTATCATTAAAGTAATTACTACAGTAAAACCGAAACCGGATCCTACTGCCGCTGGTGCAAACGACATAAACAATGATAGATGCCCAAAATGTCCATATAGAGCCAGCGACAAGAACGTTCTTATGACGCATATTCAGCAACATCAGCCTTCCACTCACTCTATATTCAAGTGCTACTTTTGTCCATACTTCGTTAAAGACGAATGTGAGTTAATACAACATCTGCAACTACATGGCGTCACAGACCCAGAAGACTATATTTCAAAGGCCATGGGATGCAGATCTCCCTTGCCGGAACCTCAAGCTGTACTTCCGCCAGCGAACCATTCAGGTAGTACTAAACGACACAGGTGTACAGAATGCCCTTACGAGACCAATAGTAAATCTCAATATATGTATCATGAACAGTTCCACAGACTACCTCCAGACACGCCCTATAAATGTCCTGAGTGTAACTACAGTGTTTCCAAACGACACTTACTTCATCAACATCTAAGAGTACACGGTATTATACCGAAGAAAAATGAATCAGAAGCAGATTTGGAAGCCGCGCCATCATCCCAAAAGATAGAAAACAACACTGACGTATCTACCCACAACCTAGATGAAATAGCATACGTTTGGGTTTCAGCGAAAAATGAATttcataaaatgtataaatgtcGTTACTGTTCCTATGTAAACTCCCAAAAGTGTAAAATACCGAACCATGAAAAAATTCACTGCTTTACTTTTGAAAATAGCGACGTAACTGTATATAAATGTTTGGAATGCAAATTTACTTGTGATAACTCAATAAGATTGGCTGAACATTCTAAATCTCATGGCGAAATATACGGCCGAATATACTGCCCGGTTGAAGATGATATTCCAGATGAAGAACAAGTTTTAAAATTACGCAAAGTTATTGAActtgaaaaatcaaataaccCTGAAGTATCGCCTAAAGAAGAACATACAATTACTGAAAATAAGGAaatcaaaatattacatttctgTGAAAAATGCCCCGCACGATATTTTACAGAGAGTGAATTAAAAGTGCACGAAAGCTTCCACGACTCAACAGatttatataaatgtaaatattgtgaTTTTACAGTACCAGATGAAGATGAACTAACGTTGCATCATATAGTACACTCAGATGAATATCACACTAAAACCAAAATGCTCAAATTTGTCCATAACTTACATCCCGCTTATAAAGAACCTCGGTTGGAACTAGTTCATTGTCAAGTTACTCTAGAAGTTGCGTGGATAGTGAATCCGATCAAGCACATTGAAAATGAACATAATATTGAAGTGAATACCAAGAAACATAATGAGTCAAAACATACACCCAAACAATATTGCTGTAAAGAATGTCCAGCCAAGTTTTTCAAAAGTTCGGCTCTAAGTTATCACGTAGGTTTACATGGGGGAGAAGGTGaacataaatgtaaaaaatgcaCTTATGCGGTGAAGAACATAGGAAATTTAGCAAAGCATGAACTCCTTCATGAACAAGAGAACAAAGCAAGCAATTGTGATTATGAATCCGGCGAAGACGTGGACTACAAAAATGTTCCACTATCGGGTACAGATCTATTTCAGAGGAAAACTGAAGCACAAAAAAGGGTATTAATTGATAAAGATAAGTTAGTTAAACCCAATGATCATTTTCCACCAGTACTTCAAGCCGATCCGCAATTCGGCTATCTTATGCATGGTAACCCAGAATTTATATACcctacatatttaaaaaatggacgGCAAAAAGAAAAACGTTACAAATGCCACAAATGTCCATCTGCGTTCGAAAAACGCGAGCAATACAAAATTCACCTCTCTCTACACGGTTCAAAACAGCGGTATAAGTGTGAACTCTGTGACTACTCTGTTAAATATTATGCTAATTATGTACAACACATGAGGAAGCACCAAATGAATGATGAAGCACAAgccgaaagaaagaaaggctgCAGTGGTTATTCTGAAACTGAAAGCCACGATATTAAACAGGAAGACAGTTCAGATAATATAAAGCTCGCTATTAAAACAATGCCTAGAGGCACACCTAAGAGTGATTTTCAACAATTTTCGATAAGAGATCAACAAACACTTCGATTATTACAGCGAAGAAGATCTCAAAATAATTCTGCAAAAGAAACAAACACATCAGAACCATCTCCAACAAAAGAACGCAAAATGCATATGTGTCTACTATGTCCATATACAAATCAACGACAAGATGCATTGACCAACCATTACAAGCGGCACGATGACACCGATGCACTGACCGTCTCCTACCACTCGGGTAATCATAAGTGCTCTTACTGCGACTTAGTCGTCGTACAGTCGCACTTTCTTCGAGAACATTTGAAGACGCATTTTAATTATCACAAAACTCTCACTCCTGAATGCTTTGTGGCCAACGAAGACGTCAGCTTTACTATAACAAAAATGGACGAAAAAAGTGAGCCACTCGATCTCAAATTAGATTTTCAAATTAAGGATTTTAAGTGCAATGATGAGAAAATGTTTGTCAAAATTACCACAGGGGAGTTGTTGGTAGAATAG
Protein Sequence: MLQQMSSPSSAQLGEVAAIVRTFEGRVCGEVSSGASSDAAEDFELPHCKIRRNYSCMKCTYYTQNPRAYLMHTRDVHFVRLKIFDCPHCLYASRHYQKLVRHVKMVHGGSTAEASTKVEPEVSASACDAGDSSERMEDMVEEIEDNDDIQLEVDDVEEPERSDDIDTEIERIPERSTSNTPKNKGNFFSCDKCNYVTHLRARFTKHVKYHSMPMIKCTTCDFRTPYKWNLDRHMKNHGGTGSFNCSMCNFTADIKQSLTVHEMNHHTPPVGCTVASRRRNRVGASDVSLAEAATALLPKEEDGSSDSRSSHSASEMGLQYSEKEIMTSNSDSNDASVSETGLKEHLLVDHAQANNASTHDSAQKQCKKTPRPIPQLIPLNASTPNQSKTSPGEPPAKKFKESINETFNANSDSKSESQSFVPSINAKETGTRKKNESFFDRLKERLLTETGENGSLTCKNCGFESKCLSEHSVHEKNCTSLGNRSTPNTLMSSLSSTRCQNCRHRCKSSADLLVHMKTCRKAERMGDATFDDPQSRDNSELSSKIEKEAEPHPMENVVFVWNNINHDASKFDTPLDININDDSTLPDMRKSYENDTVDDNESMNLSPSQAAGKNVFKCPHCPFWASTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNDAKVLMTDETGRRNYSKYSKFLAMPVLNENGENEFHYLDTNTAADASMEVDESFSDANDGTNTSVDMQPLNLQTQHSELKSDVLDMRHADSKKVKKTLWKCKKCNYRDPSKEALLEHVREHSRVEGNDDDPKNLSGKKTDNMPDPSDLAYRCGHCNQLSNWKHVIQRHCRLKHEGIIKVITTVKPKPDPTAAGANDINNDRCPKCPYRASDKNVLMTHIQQHQPSTHSIFKCYFCPYFVKDECELIQHLQLHGVTDPEDYISKAMGCRSPLPEPQAVLPPANHSGSTKRHRCTECPYETNSKSQYMYHEQFHRLPPDTPYKCPECNYSVSKRHLLHQHLRVHGIIPKKNESEADLEAAPSSQKIENNTDVSTHNLDEIAYVWVSAKNEFHKMYKCRYCSYVNSQKCKIPNHEKIHCFTFENSDVTVYKCLECKFTCDNSIRLAEHSKSHGEIYGRIYCPVEDDIPDEEQVLKLRKVIELEKSNNPEVSPKEEHTITENKEIKILHFCEKCPARYFTESELKVHESFHDSTDLYKCKYCDFTVPDEDELTLHHIVHSDEYHTKTKMLKFVHNLHPAYKEPRLELVHCQVTLEVAWIVNPIKHIENEHNIEVNTKKHNESKHTPKQYCCKECPAKFFKSSALSYHVGLHGGEGEHKCKKCTYAVKNIGNLAKHELLHEQENKASNCDYESGEDVDYKNVPLSGTDLFQRKTEAQKRVLIDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKGCSGYSETESHDIKQEDSSDNIKLAIKTMPRGTPKSDFQQFSIRDQQTLRLLQRRRSQNNSAKETNTSEPSPTKERKMHMCLLCPYTNQRQDALTNHYKRHDDTDALTVSYHSGNHKCSYCDLVVVQSHFLREHLKTHFNYHKTLTPECFVANEDVSFTITKMDEKSEPLDLKLDFQIKDFKCNDEKMFVKITTGELLVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01359347;
90% Identity: iTF_00859064;
80% Identity: -