Basic Information

Insect: Laothoe populi
Gene Symbol: -
Assembly: GCA_905220505.1
Location: HG992152.1:7246761-7255342[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.0063 0.6 11.6 1.1 3 23 616 637 615 637 0.96

2 23 0.24 22 6.7 0.3 1 22 1024 1045 1024 1045 0.95

3 23 3 2.9e+02 3.2 0.2 1 22 1087 1108 1087 1110 0.87

4 23 0.014 1.3 10.6 1.9 3 21 1121 1139 1121 1140 0.96

5 23 1.7 1.6e+02 4.0 0.1 2 23 1148 1170 1147 1170 0.89

6 23 0.00075 0.071 14.6 0.4 3 23 1191 1212 1189 1212 0.97

7 23 0.0024 0.23 13.0 3.5 1 23 1218 1241 1218 1241 0.95

8 23 0.14 13 7.4 0.0 1 23 1267 1290 1267 1290 0.90

9 23 0.0063 0.59 11.7 3.5 1 23 1295 1317 1295 1317 0.97

10 23 0.02 1.9 10.1 0.2 1 23 1323 1346 1323 1346 0.95

11 23 0.0012 0.11 13.9 1.3 1 23 1359 1381 1359 1381 0.98

12 23 0.0061 0.58 11.7 4.3 1 23 1430 1453 1430 1453 0.96

13 23 0.027 2.6 9.6 3.6 1 23 1513 1536 1513 1536 0.97

14 23 0.0075 0.71 11.4 1.5 2 23 1562 1584 1561 1584 0.95

15 23 0.11 11 7.7 0.2 2 23 1590 1612 1589 1612 0.95

16 23 0.0074 0.7 11.4 0.5 1 22 1656 1677 1656 1680 0.91

17 23 0.0014 0.13 13.7 0.6 1 23 1687 1709 1687 1709 0.93

18 23 0.00013 0.012 17.0 0.3 2 23 1797 1819 1797 1819 0.93

19 23 3.8e-07 3.6e-05 24.9 1.4 3 23 1826 1846 1825 1846 0.98

20 23 0.028 2.7 9.6 1.5 1 23 1863 1885 1863 1886 0.96

21 23 0.16 15 7.2 0.0 1 23 1905 1927 1905 1927 0.98

22 23 0.031 3 9.5 0.6 1 23 1933 1956 1933 1956 0.95

23 23 9.8e-05 0.0092 17.3 0.5 1 23 1964 1987 1964 1987 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.0063	0.6	11.6	1.1	3	23	616	637	615	637	0.96
2	23	0.24	22	6.7	0.3	1	22	1024	1045	1024	1045	0.95
3	23	3	2.9e+02	3.2	0.2	1	22	1087	1108	1087	1110	0.87
4	23	0.014	1.3	10.6	1.9	3	21	1121	1139	1121	1140	0.96
5	23	1.7	1.6e+02	4.0	0.1	2	23	1148	1170	1147	1170	0.89
6	23	0.00075	0.071	14.6	0.4	3	23	1191	1212	1189	1212	0.97
7	23	0.0024	0.23	13.0	3.5	1	23	1218	1241	1218	1241	0.95
8	23	0.14	13	7.4	0.0	1	23	1267	1290	1267	1290	0.90
9	23	0.0063	0.59	11.7	3.5	1	23	1295	1317	1295	1317	0.97
10	23	0.02	1.9	10.1	0.2	1	23	1323	1346	1323	1346	0.95
11	23	0.0012	0.11	13.9	1.3	1	23	1359	1381	1359	1381	0.98
12	23	0.0061	0.58	11.7	4.3	1	23	1430	1453	1430	1453	0.96
13	23	0.027	2.6	9.6	3.6	1	23	1513	1536	1513	1536	0.97
14	23	0.0075	0.71	11.4	1.5	2	23	1562	1584	1561	1584	0.95
15	23	0.11	11	7.7	0.2	2	23	1590	1612	1589	1612	0.95
16	23	0.0074	0.7	11.4	0.5	1	22	1656	1677	1656	1680	0.91
17	23	0.0014	0.13	13.7	0.6	1	23	1687	1709	1687	1709	0.93
18	23	0.00013	0.012	17.0	0.3	2	23	1797	1819	1797	1819	0.93
19	23	3.8e-07	3.6e-05	24.9	1.4	3	23	1826	1846	1825	1846	0.98
20	23	0.028	2.7	9.6	1.5	1	23	1863	1885	1863	1886	0.96
21	23	0.16	15	7.2	0.0	1	23	1905	1927	1905	1927	0.98
22	23	0.031	3	9.5	0.6	1	23	1933	1956	1933	1956	0.95
23	23	9.8e-05	0.0092	17.3	0.5	1	23	1964	1987	1964	1987	0.96

Sequence Information

Coding Sequence: atgaGTGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCCGATGACTCGGAACCTCCCGTCCTCGCGTTGAAAATCAAGGATTGCGTGTCCATACAGATTACCGAAAATGACGACTTGCCGACAAATGTCTGCAGGAAATGCATGGACAATGTCAATAACTGGCATGTTTTCAAGTCTGTCTGTGAAAGGACTCAAAACAAACTACAGTCTCTGATTAATAAAGATGGCAGCCAACTAGAAGAGGTGAAAATAAAGAGTGAACCATTATCTGATGAGGCCTATGATGATGGAGTTGTTATTGATGGTTCATACCCTGACAGTGAGAATGCCACCTCTAGTAAGGTACAGCCTGAAGGGCCTCCAATCTTGGCGTCGCTGGGACTCACGCCAAGGAGTGATAAGACAAATGTGGACCCACGTATGGATTGGCATCGTGTCCATGCGATATTGAACATGGTACAAGGCAGCAATATCATTGATTCCCTACAGAACACTGAGGAGTGTGATGTGCTCCAATATTCAGATCATGATTCTGAATCAGAAATAGAACTTCAGCCTAACATTGATGACATGTTCATAGATTGCAAAAGTGGCTAtttgtgtaaaaataataaattaatatcgaAAAATCCCAAAATGTCATCAACTCTTAAAAATGAAAAGGTTAGACAAGCTGCCAATTTGAGGAAGCGTAAAGTAGAAACAATACGACATTGTGCTCGACCTAAAGATGCTTGgcaattattttttactgatgATCTTCTAGAACAGATTGTTATTTCTACAAATGataatatagtaaaaaatgGAAGTAATCATTCGGTTCCTACATCTATTGGTGAAATCAAAACTGTTATCGCGATTCTGTACTTAAACGGCATAATGAGGCCAACGCATCAGAAATGCAGCGACCTTTGGAACAGTGAGTGTGGCGTCCCTTGCATTAGAAGAGCCATGAAATTCGATCGATTCAAGTTCATATTGCAGAATATGAGATTCGATAAAGAAGACGCTGACAGTATAATCCAGTTAGATATCATGAAACGGATacgtaaagttttcgaaatttTCGCTATGAACTGTCGCACGACTTTCGACATTCAAAATGTTGCGGTCGTCGACGAGATTATTGTGCCAGTTTACGGACCATGCCCATTCCGATACGAAATTGATAAGAAACCGTTGAAACGTGGCGTGAAAATGGTATTGATGATCGATCCGTCTAACTTCTATGTGAGTAATATTGATGTAATAATGGATCCTTATTTCGAAGCAGAAGAGATTGTCAAAAAAGTAACCCAACATTTGGCTGGTTCGGGAAGAGTCATTATCATGGATAGTTGGTTTGGGTCCATGCCACTGATTAGAATCCTAAAGAAACAATATCAGTTATATTCTATCATGGCTCTTAATCCGGAAGACGATGTTATACCCCCTCTGTTCCTTTCACAATACAGGAAAAAAAGATCATTTATGTCTGCATTCCTTGATGACGATTTGTCCTTAACCTCATATGTGAACTCTGACTTAAAGTCTGTGAATGTTCTCACAAATGACCCTAGGTTTTATAAGAGAGGACATGTGAATAACACAACAGTAGTGTCATTGTATAAAAAGAATCAGTCTGCAGTGGAGGGCATGGAGAGTGAGAAAGACGACGACGAGGAAGAGATGGTTGATGAATCCGCTCAATCTTACAGCAAGGTAGCAAACATGCCCGAGGTTTCCATCACCGTCATGCGTCCCTCAGGGGAAACGCTTCACGCACGGCAAGGTATTCAACAATTAGCATCCAAAGACTGTCTTGTTTGCGGAAGGACTTACAGATACTCGCACAATGCAAGACGACACGAACTTACAGCTCATAGTTTTGACAGGTACAccaataaaattacaaacaagAAATCTCACAATCGGCTAATACCtaaactaagacctaaccccttcAATCCTCAGGCGAGATTAATGCCTAATCCCATTAGCCACAAAAGACAATTCCTACCCAAGAATAGTCCAGCAAAAATAATACCCCAGAAGGTCATCACTCCACCGAAACCCATTCCTATTAAAACGGCAAAGGCTGTTCAAAACAATTTACCGTATCCTCTTCGAATAAAAGCTCTTAAAGATttacaaataaagaaaaaagagCCACAGATTTTGAAAACTCTGCTGACTGCCAAACCCGAAGTTTTAGTTTCTGAACCAGAAATTATAAATTCCGGTCCAGAAAGTCCGGAGACGTTAATATCCGAACCGGAAATTGCGTCATTCCAAGTTGAAGCTATACTGTCCGAACCGGATCCCGAGGCTTATGATCATCATCAAGTAGACGAAGAAGCGGATGGTGAAGTGCTGAATAATCAAAATCCAAACTATGACACTGTCGATATGGATTCAgaaaatgaaattgaaattgcTAGACAACATGAAAATGATCAAGATGGTGACGATCAAATGGAGTCACACGATAATATGCACcatgatgatgataataatatggACGGTGTCCAGAGTGACAATGAGAACGAGAAAGAGCCCAATGAAGAAAACATACACAGCCAAGATCATATGATGAACGATGAGAATGGTGATGTCAGAGCTGAAGAAGACGATGGCAAAGATGGGGAAGAAGGTCATGAAGAAAAGGAACACGAGGAAAATGAACATGAAATGAATCATGAAGAcaacgatgatgatgatgaagagaTGCCGCCTATCGCGCCAGTAGTCGAGATCAATGAAGATTTGCAAGTTAACTCGTTCAATAATGAGCCAAATGAAATAAATGAGGAGGAAGAAGAACTTGATGAAACAGTAGATCCTAATGACACCGTCGATGATGCAAAAGAACTTGACCCTGACAAGGTTTATGTAACTAAGACTCAAAGAGAATTCATCCGGAAGTACCGCGACGTCATCGAGCAAATCAATACGAAAAGATGTTTGTGCTGTGATCGTGAACATCCTCGTAGGAAAGCAGTCATAcaacatttacaaaaaaatggACACAAAGTTCCCAAACATACATGCTATAACTGTGTCATTACTTTTGGACATATCGGAGCATTGCTGAGCCATATGCGATCCAATTCCTGCACAGATCTCTGGAAAATTATTTACAACGAAAATGGCATTACTGACGATTTAGTTCTACAAGATGGGCCTAAAGATACTAAGGTTCAATATAAGGATATTTTTAACGCTAGATCTTACGCTTGCAAGCTGTGTCCAGCAAAATTCCAACTAAAGCAGTTTATAATGAAACATATGGTGGACGCGCACGAGGATGGACAATCTAGAGTGCCACTCGGCTGTGTCCACTGCCGAGCCAGATTCAAGGACAAGAATTTATTAAAGAAACATATTCGCAATGGCGAATGCACTGTCTATATATCTTGCGATTTATGCTCTGAAAAGTTTGGAAATATGCAAGATTTTAACGACCATGCTCTTGCAGTCCACGCCGGAAGCTTCGACCAGTCGGACAGTGCTAATAAGTGTGTAGACGGTCGTCCGACTGATTGCCCAATATGTGGCAAGAAAACCCAAAACTATACACTCTTGGTAAAGCATTTGAAAACTATTCATAACGAGGAGAAACCTCACTATTGCAAACATTGTGATTCCAAGTTTGAACAAGCAGCGGAtcttaataaacacatatacaaaGAGCATTCGGACAGATCATTGCTCATGCAGAGTAGTGAGCCTGACATGTCTCTGGTGAAAGAGGAGGCTGAAGAATATCATTATTCCTGCACTGAATGCAACGCTATATTCGAAACGgtagacgcttggaccgatcaCCAAGTGGCTGAACATAACCAAGTCGCGCACCACTGCGACCAATGTGATAAGAAGTTCTTGCGACCCTCTGAACTCGCCGAACATAAAAATACCCATTTACGTGTGAAGTTTTATCCATGCAGTGTTTGCTCAAACTCTTACAGCACTCCACAGAAACTTTCAGAACATGTTCAACAAGCCCATCCTGGAATGAGGACAATGACTACGACGGAGTCTGAATTCTATTGCGATATATGTATCAGATCATTTAAAAGCCGTCAGGCTTATTCTAATCACATGCGTATCCACGCGAAAGTACCCACAACTAATAGGAAACCGGGTGAATCTAAAGGATTTGCACCTCAGATTATCGGAAAGCCAATTAAACAGTTTTCTATGATGCAGCCTGGATTTGTCTCATTCAAGCCCAGTTATAATGTCCCTAATGCGCCTTATTGCTGCgacctatgtggcaaaggattTATGCACAAAAAGAATATATGGAAGCATAAGAAGGTATTGCatgctgatattataaatgataGAAATGACAGCGAAGAAAACACAATGCAGGCGTCAACTGAAGAAGAGGAATTCAATAATGAAGAAAATGGCACCGGCTTGTCGACGCCCCAATTTAACAGCTTCAATTTTGCGAACTTTTCAAGTAATTTACAACAATCGCAACAAGATCCCATGCCTTACTCGTGTGAGTTGTGCTATCATCGATTCCCACTGCGAAGTAGTTTGTGGAAACATAAACGAAACAAGCACGGTATTATAAATCCTAACTTGGATAGTTCTGAAACTCAGGCGCAATCATCTGGCGGTGACGGCAGTAGCAGATCTAGTTGCACTATTTGCAAAATAAACTTTGCGGACAAGAAATCATACTACCGACATCGAAAGAATGTCCATAAATCATCTGTCCAAATGTGCAAATTATGTGGCAAGCCGCTGAACTCTACCCTCGAACTTTACGAACATTTAAAGTCTGCTCACGCACGGGAGCTGTTGGGTTATAACGCAAACCAAGGGTCGAGTAAATCCCAAGAACCACCTCAAGAAATGGAATCTGAATATGACAATGACAATGAAGCCGCCGACCCTAGTGTTGATTATCAAGCGAGATACCCCTGTGACACTTGCGGCAAACAGTTTGTCGGATTGCTCGCTTTGCAAAACCACCAGTGTATTAACCAACATCCTTCGCAACCACAGACTTTTGACTGTGAAATCTGTCACAAGAGTTACACATCCATCGctgctttgaaaagtcatcgCGGCTGGCATTTACGCTCGCCCGACGGTAAGGCGGCTGCCAACAACTCCGGCCTGTGGATGCCACAGCACAAGGTGACAAACAAGGTGAGCAAATACGAGGTCGTGGACGCTTCGCAGTTGGCCAAGGTGACACATTCCACTCCAGCTTCAGTCGCCAAGAGAAGACTACCACCCGAAGTGGAGGTAACCGTCGTAAATCCAAACAAGAAACTACGATCTGACGATTCGATCGAATTGGAACAGCACAGCTCCGGCGCACTCGAGGATAGATATTGCACAATTTGCGACAAGGAGTTTACCAAACGGGCCGCGTACCAGCGCCATATGGATGAGGTGCATCAGCCGAACTCTGTGTTCTGTCCGGTCTGCGACAAGAGTTTCACGCGGAAGTCGACGCTGCTCGTGCACATGAAGAAGCATTACGAAGGTGGGGAAGGCAGTTCGTCGAACGCGATGATGGACGACGAGTATTCTTGTGACCTGTGCGGGGCGCAGTGTGAGAGTGCTAAGGGGTTGCGTGTGCATCGGGAGCGGCATCACGGCGAGGACTCGAACGAGTCTGAAGAAGAGGCGCCGGTGCCGCCACCGGGAGAGTTCACGTGCGCGCAGTGCGGAGACGGCGTCGCCACACCACGTGACCTCATCGCACATCGCTCCATGCACGCCACACCCACCAAGTTCTTCTGCAACATCTGCAAAGTGTATTTCGCTAGGGCGTTGGATCTCTCGTCACACACCCGCGCCCGACACTCGGACAACGAAAAAGTGTTTTTCCCATGTTCGATGTGCGAACGCTCCTATATGAACAAGAAGAGTTTACAGAGACACATTGAAATGGCTCACTGA
Protein Sequence: MSVNYDRVCRLCLSSRGELLPIFPTTSSDDSEPPVLALKIKDCVSIQITENDDLPTNVCRKCMDNVNNWHVFKSVCERTQNKLQSLINKDGSQLEEVKIKSEPLSDEAYDDGVVIDGSYPDSENATSSKVQPEGPPILASLGLTPRSDKTNVDPRMDWHRVHAILNMVQGSNIIDSLQNTEECDVLQYSDHDSESEIELQPNIDDMFIDCKSGYLCKNNKLISKNPKMSSTLKNEKVRQAANLRKRKVETIRHCARPKDAWQLFFTDDLLEQIVISTNDNIVKNGSNHSVPTSIGEIKTVIAILYLNGIMRPTHQKCSDLWNSECGVPCIRRAMKFDRFKFILQNMRFDKEDADSIIQLDIMKRIRKVFEIFAMNCRTTFDIQNVAVVDEIIVPVYGPCPFRYEIDKKPLKRGVKMVLMIDPSNFYVSNIDVIMDPYFEAEEIVKKVTQHLAGSGRVIIMDSWFGSMPLIRILKKQYQLYSIMALNPEDDVIPPLFLSQYRKKRSFMSAFLDDDLSLTSYVNSDLKSVNVLTNDPRFYKRGHVNNTTVVSLYKKNQSAVEGMESEKDDDEEEMVDESAQSYSKVANMPEVSITVMRPSGETLHARQGIQQLASKDCLVCGRTYRYSHNARRHELTAHSFDRYTNKITNKKSHNRLIPKLRPNPFNPQARLMPNPISHKRQFLPKNSPAKIIPQKVITPPKPIPIKTAKAVQNNLPYPLRIKALKDLQIKKKEPQILKTLLTAKPEVLVSEPEIINSGPESPETLISEPEIASFQVEAILSEPDPEAYDHHQVDEEADGEVLNNQNPNYDTVDMDSENEIEIARQHENDQDGDDQMESHDNMHHDDDNNMDGVQSDNENEKEPNEENIHSQDHMMNDENGDVRAEEDDGKDGEEGHEEKEHEENEHEMNHEDNDDDDEEMPPIAPVVEINEDLQVNSFNNEPNEINEEEEELDETVDPNDTVDDAKELDPDKVYVTKTQREFIRKYRDVIEQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVITFGHIGALLSHMRSNSCTDLWKIIYNENGITDDLVLQDGPKDTKVQYKDIFNARSYACKLCPAKFQLKQFIMKHMVDAHEDGQSRVPLGCVHCRARFKDKNLLKKHIRNGECTVYISCDLCSEKFGNMQDFNDHALAVHAGSFDQSDSANKCVDGRPTDCPICGKKTQNYTLLVKHLKTIHNEEKPHYCKHCDSKFEQAADLNKHIYKEHSDRSLLMQSSEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCDKKFLRPSELAEHKNTHLRVKFYPCSVCSNSYSTPQKLSEHVQQAHPGMRTMTTTESEFYCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGESKGFAPQIIGKPIKQFSMMQPGFVSFKPSYNVPNAPYCCDLCGKGFMHKKNIWKHKKVLHADIINDRNDSEENTMQASTEEEEFNNEENGTGLSTPQFNSFNFANFSSNLQQSQQDPMPYSCELCYHRFPLRSSLWKHKRNKHGIINPNLDSSETQAQSSGGDGSSRSSCTICKINFADKKSYYRHRKNVHKSSVQMCKLCGKPLNSTLELYEHLKSAHARELLGYNANQGSSKSQEPPQEMESEYDNDNEAADPSVDYQARYPCDTCGKQFVGLLALQNHQCINQHPSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTNKVSKYEVVDASQLAKVTHSTPASVAKRRLPPEVEVTVVNPNKKLRSDDSIELEQHSSGALEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYEGGEGSSSNAMMDDEYSCDLCGAQCESAKGLRVHRERHHGEDSNESEEEAPVPPPGEFTCAQCGDGVATPRDLIAHRSMHATPTKFFCNICKVYFARALDLSSHTRARHSDNEKVFFPCSMCERSYMNKKSLQRHIEMAH*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00063790;
90% Identity: -
80% Identity: -