Basic Information

Insect: Amorpha juglandis
Gene Symbol: -
Assembly: GCA_949126905.1
Location: OX421370.1:12834652-12844950[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.0066 0.41 11.6 1.1 3 23 672 693 671 693 0.96

2 23 0.25 16 6.7 0.3 1 22 1080 1101 1080 1101 0.95

3 23 3.1 2e+02 3.2 0.2 1 22 1143 1164 1143 1166 0.87

4 23 0.014 0.9 10.5 1.9 3 21 1177 1195 1177 1196 0.96

5 23 0.56 35 5.5 0.1 2 23 1204 1226 1203 1226 0.89

6 23 0.0043 0.27 12.2 0.2 3 23 1247 1268 1245 1268 0.94

7 23 0.00055 0.034 15.0 2.7 1 23 1274 1297 1274 1297 0.95

8 23 0.15 9.3 7.3 0.0 1 23 1323 1346 1323 1346 0.90

9 23 0.0065 0.41 11.6 3.5 1 23 1351 1373 1351 1373 0.97

10 23 0.02 1.3 10.1 0.2 1 23 1379 1402 1379 1402 0.95

11 23 0.0012 0.077 13.9 1.3 1 23 1415 1437 1415 1437 0.98

12 23 0.0063 0.4 11.7 4.3 1 23 1486 1509 1486 1509 0.96

13 23 0.0054 0.34 11.9 1.8 1 23 1569 1592 1569 1592 0.97

14 23 0.0024 0.15 13.0 1.5 2 23 1618 1640 1617 1640 0.95

15 23 0.12 7.3 7.7 0.2 2 23 1646 1668 1645 1668 0.95

16 23 0.0087 0.55 11.2 0.5 1 21 1712 1732 1712 1733 0.95

17 23 0.0015 0.092 13.7 0.6 1 23 1743 1765 1743 1765 0.93

18 23 0.00015 0.0097 16.7 0.3 2 23 1853 1875 1853 1875 0.93

19 23 3.9e-07 2.5e-05 24.9 1.4 3 23 1882 1902 1881 1902 0.98

20 23 0.01 0.63 11.0 2.0 1 23 1918 1940 1918 1941 0.96

21 23 0.14 9 7.4 0.0 1 23 1960 1982 1960 1982 0.97

22 23 0.032 2 9.4 0.6 1 23 1988 2011 1988 2011 0.95

23 23 2.9e-05 0.0018 19.0 0.5 1 23 2019 2042 2019 2042 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.0066	0.41	11.6	1.1	3	23	672	693	671	693	0.96
2	23	0.25	16	6.7	0.3	1	22	1080	1101	1080	1101	0.95
3	23	3.1	2e+02	3.2	0.2	1	22	1143	1164	1143	1166	0.87
4	23	0.014	0.9	10.5	1.9	3	21	1177	1195	1177	1196	0.96
5	23	0.56	35	5.5	0.1	2	23	1204	1226	1203	1226	0.89
6	23	0.0043	0.27	12.2	0.2	3	23	1247	1268	1245	1268	0.94
7	23	0.00055	0.034	15.0	2.7	1	23	1274	1297	1274	1297	0.95
8	23	0.15	9.3	7.3	0.0	1	23	1323	1346	1323	1346	0.90
9	23	0.0065	0.41	11.6	3.5	1	23	1351	1373	1351	1373	0.97
10	23	0.02	1.3	10.1	0.2	1	23	1379	1402	1379	1402	0.95
11	23	0.0012	0.077	13.9	1.3	1	23	1415	1437	1415	1437	0.98
12	23	0.0063	0.4	11.7	4.3	1	23	1486	1509	1486	1509	0.96
13	23	0.0054	0.34	11.9	1.8	1	23	1569	1592	1569	1592	0.97
14	23	0.0024	0.15	13.0	1.5	2	23	1618	1640	1617	1640	0.95
15	23	0.12	7.3	7.7	0.2	2	23	1646	1668	1645	1668	0.95
16	23	0.0087	0.55	11.2	0.5	1	21	1712	1732	1712	1733	0.95
17	23	0.0015	0.092	13.7	0.6	1	23	1743	1765	1743	1765	0.93
18	23	0.00015	0.0097	16.7	0.3	2	23	1853	1875	1853	1875	0.93
19	23	3.9e-07	2.5e-05	24.9	1.4	3	23	1882	1902	1881	1902	0.98
20	23	0.01	0.63	11.0	2.0	1	23	1918	1940	1918	1941	0.96
21	23	0.14	9	7.4	0.0	1	23	1960	1982	1960	1982	0.97
22	23	0.032	2	9.4	0.6	1	23	1988	2011	1988	2011	0.95
23	23	2.9e-05	0.0018	19.0	0.5	1	23	2019	2042	2019	2042	0.96

Sequence Information

Coding Sequence: aTGAGTGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCCGATGACTCGGAACCTCCCGTCCTCGCAGTGAAAATCAAGGATTGCGTGTCCATACAGATAACCGAAAATGACGACTTGCCGACAAATGTCTGCAGGAAATGCATGGATAATGTCAATAACTGGCATGTATTCAAGACTGTGTGTGATAGGACTCAAAACAAACTACAATCTCTGATTAATAAAGATGGCAGCCAACTAGAAGAGGTGAAAATAAAGAGTGAGCCATTGTCTGATGAGGCCTATGATGATGGGGTTGTCATTGATGGATCATATCCAGACAGTGAgAATGCCACCACTAGTAAAGTGCAGCCAGAAGGGCCTCCAATCTTGGCGTCGTTGGGGCTCACGCCGAGGAGTGATAAGACAAATGTGGACCCCCGTATGGATTGGCATCGGGTCCATGCAATACTGAACATGGTACAAGACAGCGATATCATTGATTCCCTACAATCCACAGAGGAGTGTGATGTTCTCCAGTATTCTGATCATGATTCTGAATCGGAAACAGAACTACAACCTAACATTGATGACATATTCATAGATTGCAAACATGGttatttgtgtaaaaataataaaataatatcgaaaaatCCCAAACTATCAACAACTCTTAAAAATGAAAAGATCAGACAAGCTGCGAATTTGAGGAAACGTAAAGTAGAAACAAAACGACATTGCGCCCAACCTAAAGATGCTtggcaattattttttactgatGACTTATTAGAGCAGATTGTTGTTtcgaccaacgacaacataGGAAAAAATGGAAACAGTAATTCAGTTCCTATAACTGTTggtgaaataaaaattgttatcgGCATTTTATACCTAAATGGTATAATGAGGCCAACGCATCAGAAATGCAGTGACCTTTGGAACAACGAGTGTGGTGTCCCTTGCGTTAAAAGAGCTATGAAATTCGATCGTTTCAAATGTATACTGCAGAATATGAGATTCGATAAAGATGACGCCGACAGCATAATACAATTGGACATCATGAAACGGATACGTAAAGTATTCGAAATTTTTGCTATGAACTGTCGCACGACTTTCGACATCCAAAATGTTGCGGTCATTGATGAGATCATTGTGCCAATTTACGGACCATGCCCATTCCGATACGAAATTGATAAGAAACAGTTAAAATGTGGCGTAAAAATAGTACTGATGGTTGATCCGTCTAACTTCTATGTGAGCAATGTAGACGTGATCACGGATCCGTATTTCGAAGCTGAGGAGATTGTCAAAAAAATAACCCAACATTTGGCAGGTTCAGGTAGAGTTATTGTCATGGATAGCTGGTATGGGTCCACTGCACTGATGAAATTGTTGAAGAACCAGTATCAATTATATTCTATTGCAGCTGTTAATCCCAAAGATGATATTATACCGCCCCTGTTTCTTTCACAATACAGGAAAAAAAGATCATTTATGACTGGTTTCCTTGATGATGATTTATCCTTAACATCATATGTGAATTCCGACCTGAAGTCGCTGAATGTTCTCACAAATGACCCAAGGTTTTATAAGAGAGGGCATGTTAATAACACAACAGTAGTgtcattatataaaaagaacCAGTCGGCAGTAGAAGTGCTTGATGTTTTAATGCATTATTATACAACAATGCAGTACACAAATGATTGGACGCTATCAATATTTTGCACACTACTTAACATTGCTTCTGTGAATGCTCAAGTTATGTGGAGTATTCAGAGTGGTAACAATGTTTCTCAAAGACGCATTTTCATAAAAGAATTAGCTGGTATGGAGAGTGAAAAAGACGAAGATGAGGAAGAGATGAATGAATCGGCCCAATCTTACAGCAAGGTAGCAAATATGCCCGAGGTTTCTATCACCGTCATGCGTCCATCGGGTGAAACACTACACGCGCGACAAGGTATCCAACAACTAGCATCCAAAGATTGTCTGGTTTGCGGGAGGACTTACAGATACTCGCACAATGCCAGACGACACGAGCTCACGGCTCACAGTTTCGATAGGTACACCAACAAAATCACAAACAAGAAATCTCATATGCGTCTAATACCTAAATTGAGACCTAACCCCTTTAATCCTCAGGCGAGATTGATGCCTAACCCTATTAGCCATAAAAGACAATTCATACCTAATAATATCCCAGCAAAAATAATACCTCAAAAGGTTATCACCCCACCGAAACCCATTCCTATTAAAACATCAAAGTCAGTTCAAAACAATTTACCATATCCCCTTAGAATTAAAGCACTCAAAGAtttacaaataaagaaaaaagagcCCCAAATTTTGAAAACACTGCTGACTGCGAAACCTGAAGTTTTAGTTTCTGAACCTGAAATTATAAATTCTGGTCCGGAAAGTCCTGAGACATTAATATCTGAACCGGAAATTGCATCGTTCCAAGTGGAGGCTATACTGTCTGAACCGGACCCCGAGGCGTACGACCATCAAGGAGACGATGAAGCGGACGGCGAAGTGCATAACAATCAAAATCCAAACTACGACACTGTCGATATGGATTCAGAGAATGAAATTGAAATTGCTAGACAACACGAAAACGAACAAGAAGGCGACGAACAAATGGAAGCTCACGAAGATATGCACCATGATGATGACGATAATAACATGGACGCTGTCCACAGTGATAATGATAATGAGAAGGAACATAATGAGGAAACTGTTGACAGCCAAGATCAAATGGTCATTGATGATAACACCGAAATTAAAAATGAAGAAGGTGGTAAGGATGAGGAAGAAGGTAACGAAGAGAAGGAACACGAAGAAAATGAGCATGAAATGAATCATGAGGAaaacgatgatgatgatgaagagatGCCACCCATAGCGCCAGTGGTCGAAATCAATGAAGATATGCAAGGAAATACGTATAATAATGAGACAAACGAAATAAACGAGGAGGAGGAAGAAGAAGAACTTGAAGAAACTGCAGATCCTAACGACACTGTCGATACAAAAGAACTAGATCCCGACAAAGTGTATGTAACGAAGACGCAAAGAGAATTCATACGAAAGTACCGCGACGTCATCGaacaaataaatactaaaaGATGTTTGTGTTGCGACCGAGAACATCCTCGTAGGAAGGCTGTCATACAACATTTACAGAAAAATGGACACAAAGTTCCCAAACATACCTGTTATAATTGCGTCATAACTTTTGGACATATCGGAGCCTTACTAAGCCATATGAGATCTAATTCGTGTACCGATCTTTGGAAAATTATATACAATGAAAATGGTATTACCGATGACTTGGTGTTGCAGGATGGGCCTAAAGATACCAAGGTTCAATATAAGGATATTTTCAACGCTAGATCTTATGCATGCAAGCTATGTCCAGCAAAATTCCAACTGAAGCAGTTTATAATGAAACACATGGTGGATGCGCACGAGGATGGACAGTCCAGAGTGCCACTTGGCTGTGTCCACTGCCGAGCCAGATTTAAGGACAAGAATttattaaagaaacatattcgTAACGGCGAATGCACTGTCTATATATCTTGCGATCTATGCTCagaaaagtttgtaaatatgcaAGATTTCAATGACCACGCACTGGCGGTCCACGCCGGTAGTTTCGACCAGTCTGACAGTGCAAACAAATGTGTAGACGGTCGTCCGACTGATTGTCCGATATGTggcaaaaaaacacaaaactatACACTCTTGGTAAAGCATTTGAAAGCCATTCACAATGAGGAGAAACCTCACTATTGCAAGCATTGTGATGCGAAGTTTGAACAAGCTGCTGATcttaacaaacatatttacaaGGAACACTCGGACAGATCGTTTGCCATGCAAGGGAGTGAGCCCGACATGTCTCTGGTGAAAGAGGAGGCTGAAGAATATCACTATTCATGCACCGAATGCAACGCCATATTTGAAACTGTCGACGCTTGGACCGATCACCAAGTGGCTGAACATAACCAAGTCGCTCACCACTGCGATCAATGTGACAAGAAGTTCCTGAGACCCTCGGAACTCGCTGAACATAAAAACACCCATTTACGTGTGAAGTTCTATCCATGCAGCGTTTGCTCTAACTCTTACAGCACTCCACAGAAACTATCCGAACATGTTCAACAAGCACATCCCGGTGTTCGAACAATGGGCGCAGGGGAGTCTgaattttattgtgatatatgcATCAGATCATTCAAAAGTCGTCAGGCTTATTCTAATCACATGCGTATCCACGCTAAAGTACCCACCACTAATAGAAAACCGGGTGATCCCAAAGGCTTTGCGCCCCAAATTATCGGAAAACCTATTAAGCAGTTTTCTATGATGCAGCCTGCATTTGTATCATTCAAGCCCAGCTATAATGTTCCTAATGCACCTTATTGCTGCGACCTATGTGGCAAAGGTTTCATGCACAAAAAGAATATTTGGAAGCATAAGAAGGTCTTGCATGCTGATATTATAAATGATAGGAATGACAGTGAAGAAAACACAATGCAAGCATCAACTGAAGAAGAAGAATTCAATAATGAAGAAAATGGCACGGGCTTGTCGACGCCGCAATTTAACAGCTTCAACTTTGCGAACTTCTCGAGTAATTTACAACAATCGCAACAGGACCCCATGCCTTACTCTTGTGAGTTGTGCTACCAACGCTTCCCGTTGCGAAGTAGTTTGTGGAAGCATAAGCGAAACAAGCATGGTATTATAAATCCTAATATTGATGCTTCTGAATCGCAGCCGCAAGCGTCGGGAGGTGACGGCAGCAGTAGATCTAGTTGCACTATTTGCAAGATAACATTCGCGGACAAGAAATCTTATTATCGTCACCGTAAGAATGTCCACAAATCATCTGTCCAAATGTGCAAATTATGTGGCAAGCCATTAAACTCGACACTTGAACTCTATGAGCATTTAAAATCTGCTCATGCTCGGGAGCTGTTGGGTTATAACGCAAACCAAGGGTCAAGTAAGTCCCAAGAACCACCTCAAGAACTCGAACCTGAATACGATAACGACAATGAGGCTGCCGACCCTAGCGTCGATTATCAAGCGAGATACCCTTGCGACACTTGCGGCAAACACTTTGTCGGACTGCTCGCTTTGCAAAACCACCAGTGTATTAACCAACTTCCTTCGCAACCTCAGACTTTCGACTGTGAAATATGCCATAAGAGTTACACGTCCATTGCCGCATTGAAAAGTCACCGCGGTTGGCACTTACGCTCACCTGACGGCAAGGCGGCCGCCAATAACTCCGGGCTGTGGATGCCACAGCACAAGGTGACAAACAAGGTGAGCAAATACGAGGTCGTGGACCCGTCGCAGTTGGCCAAGGTGACACATTCCACTCCCGCCTCGGTCGCCAAAAGAAGATTACCGCCCGAAGTGGAGGTGACCGTTGTTAATCCAAACAAGAAATTGCGATCCGACGACTCGATCGAAATGGAACAGCACAGTTCCAGCGCAATCGAGGATAGATATTGCTCGATTTGCGACAAGGAGTTCACCAAACGCGCCGCGTACCAACGGCACATGGACGAGGTGCATCAACCGAACTCTGTGTTCTGTCCGGTGTGCGATAAGAGTTTCACGCGAAAGTCGACACTGCTCGTGCACATGAAGAAGCATTACGAGGGAGGGGAAGGCTCATCGTCGGCGATGATGGAGGACGAGTACTCGTGCGAGCTGTGCGGCGCGCAGTGTGACAGTGCTAAGAGTCTGCGGGCTCACCGCGAGCGGCATCATGGCGAAGACTCTGGTGAGTCAGACGAGGAGGTACCTCCGCAACCTCCTGGTGAATTCACGTGCGGGCAGTGCGGAGACGGCGTCGCCACGCCGCGTGATCTCATCGCTCACCGCACCATGCACTCCACACCCACCAAGTTCTTCTGCAACATCTGCAAGGTGTACTTCGCACGGGCGCTGGACCTTTCGTCGCATACCCGCGCGAGACACTCCGACaatgaaaaagtgttttttcctTGCTCAATGTGCGATCGCTCGTATATGAACAAGAAGAGTTTACAGAGACACATTGAGATGGCCCATTGA
Protein Sequence: MSVNYDRVCRLCLSSRGELLPIFPTTSSDDSEPPVLAVKIKDCVSIQITENDDLPTNVCRKCMDNVNNWHVFKTVCDRTQNKLQSLINKDGSQLEEVKIKSEPLSDEAYDDGVVIDGSYPDSENATTSKVQPEGPPILASLGLTPRSDKTNVDPRMDWHRVHAILNMVQDSDIIDSLQSTEECDVLQYSDHDSESETELQPNIDDIFIDCKHGYLCKNNKIISKNPKLSTTLKNEKIRQAANLRKRKVETKRHCAQPKDAWQLFFTDDLLEQIVVSTNDNIGKNGNSNSVPITVGEIKIVIGILYLNGIMRPTHQKCSDLWNNECGVPCVKRAMKFDRFKCILQNMRFDKDDADSIIQLDIMKRIRKVFEIFAMNCRTTFDIQNVAVIDEIIVPIYGPCPFRYEIDKKQLKCGVKIVLMVDPSNFYVSNVDVITDPYFEAEEIVKKITQHLAGSGRVIVMDSWYGSTALMKLLKNQYQLYSIAAVNPKDDIIPPLFLSQYRKKRSFMTGFLDDDLSLTSYVNSDLKSLNVLTNDPRFYKRGHVNNTTVVSLYKKNQSAVEVLDVLMHYYTTMQYTNDWTLSIFCTLLNIASVNAQVMWSIQSGNNVSQRRIFIKELAGMESEKDEDEEEMNESAQSYSKVANMPEVSITVMRPSGETLHARQGIQQLASKDCLVCGRTYRYSHNARRHELTAHSFDRYTNKITNKKSHMRLIPKLRPNPFNPQARLMPNPISHKRQFIPNNIPAKIIPQKVITPPKPIPIKTSKSVQNNLPYPLRIKALKDLQIKKKEPQILKTLLTAKPEVLVSEPEIINSGPESPETLISEPEIASFQVEAILSEPDPEAYDHQGDDEADGEVHNNQNPNYDTVDMDSENEIEIARQHENEQEGDEQMEAHEDMHHDDDDNNMDAVHSDNDNEKEHNEETVDSQDQMVIDDNTEIKNEEGGKDEEEGNEEKEHEENEHEMNHEENDDDDEEMPPIAPVVEINEDMQGNTYNNETNEINEEEEEEELEETADPNDTVDTKELDPDKVYVTKTQREFIRKYRDVIEQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVITFGHIGALLSHMRSNSCTDLWKIIYNENGITDDLVLQDGPKDTKVQYKDIFNARSYACKLCPAKFQLKQFIMKHMVDAHEDGQSRVPLGCVHCRARFKDKNLLKKHIRNGECTVYISCDLCSEKFVNMQDFNDHALAVHAGSFDQSDSANKCVDGRPTDCPICGKKTQNYTLLVKHLKAIHNEEKPHYCKHCDAKFEQAADLNKHIYKEHSDRSFAMQGSEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCDKKFLRPSELAEHKNTHLRVKFYPCSVCSNSYSTPQKLSEHVQQAHPGVRTMGAGESEFYCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGDPKGFAPQIIGKPIKQFSMMQPAFVSFKPSYNVPNAPYCCDLCGKGFMHKKNIWKHKKVLHADIINDRNDSEENTMQASTEEEEFNNEENGTGLSTPQFNSFNFANFSSNLQQSQQDPMPYSCELCYQRFPLRSSLWKHKRNKHGIINPNIDASESQPQASGGDGSSRSSCTICKITFADKKSYYRHRKNVHKSSVQMCKLCGKPLNSTLELYEHLKSAHARELLGYNANQGSSKSQEPPQELEPEYDNDNEAADPSVDYQARYPCDTCGKHFVGLLALQNHQCINQLPSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTNKVSKYEVVDPSQLAKVTHSTPASVAKRRLPPEVEVTVVNPNKKLRSDDSIEMEQHSSSAIEDRYCSICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYEGGEGSSSAMMEDEYSCELCGAQCDSAKSLRAHRERHHGEDSGESDEEVPPQPPGEFTCGQCGDGVATPRDLIAHRTMHSTPTKFFCNICKVYFARALDLSSHTRARHSDNEKVFFPCSMCDRSYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00858780;
90% Identity: -
80% Identity: -