Basic Information

Insect: Laothoe populi
Gene Symbol: -
Assembly: GCA_905220505.1
Location: HG992174.1:6620638-6622953[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.0014 2 9.5 0.7 18 43 7 29 2 30 0.91

2 18 0.55 7.9e+02 1.2 0.3 19 43 36 57 31 58 0.75

3 18 0.00023 0.32 12.0 0.0 18 43 66 88 63 89 0.95

4 18 0.0021 3 8.9 0.4 17 43 96 119 94 120 0.89

5 18 0.05 72 4.5 0.2 18 43 127 149 125 150 0.87

6 18 5.5e-05 0.079 14.0 0.5 16 43 155 179 151 180 0.89

7 18 3.7e-05 0.054 14.5 0.9 17 44 185 209 181 209 0.90

8 18 0.0046 6.6 7.8 0.1 18 43 217 239 210 240 0.85

9 18 0.11 1.5e+02 3.4 0.0 18 44 249 272 242 272 0.84

10 18 0.88 1.3e+03 0.5 0.2 12 43 292 320 278 321 0.81

11 18 0.23 3.3e+02 2.4 0.2 15 27 354 366 346 380 0.81

12 18 0.053 76 4.4 4.8 17 43 401 424 392 425 0.86

13 18 0.87 1.2e+03 0.5 9.9 8 29 421 442 416 456 0.70

14 18 0.0026 3.7 8.6 3.5 15 43 457 482 446 483 0.78

15 18 0.065 93 4.1 0.8 17 44 488 512 484 512 0.85

16 18 8.1 1.2e+04 -2.6 0.8 18 27 519 528 516 537 0.81

17 18 1.8 2.6e+03 -0.5 0.1 34 43 562 571 547 572 0.75

18 18 8.1e-05 0.12 13.4 2.1 6 43 601 637 599 638 0.82

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.0014	2	9.5	0.7	18	43	7	29	2	30	0.91
2	18	0.55	7.9e+02	1.2	0.3	19	43	36	57	31	58	0.75
3	18	0.00023	0.32	12.0	0.0	18	43	66	88	63	89	0.95
4	18	0.0021	3	8.9	0.4	17	43	96	119	94	120	0.89
5	18	0.05	72	4.5	0.2	18	43	127	149	125	150	0.87
6	18	5.5e-05	0.079	14.0	0.5	16	43	155	179	151	180	0.89
7	18	3.7e-05	0.054	14.5	0.9	17	44	185	209	181	209	0.90
8	18	0.0046	6.6	7.8	0.1	18	43	217	239	210	240	0.85
9	18	0.11	1.5e+02	3.4	0.0	18	44	249	272	242	272	0.84
10	18	0.88	1.3e+03	0.5	0.2	12	43	292	320	278	321	0.81
11	18	0.23	3.3e+02	2.4	0.2	15	27	354	366	346	380	0.81
12	18	0.053	76	4.4	4.8	17	43	401	424	392	425	0.86
13	18	0.87	1.2e+03	0.5	9.9	8	29	421	442	416	456	0.70
14	18	0.0026	3.7	8.6	3.5	15	43	457	482	446	483	0.78
15	18	0.065	93	4.1	0.8	17	44	488	512	484	512	0.85
16	18	8.1	1.2e+04	-2.6	0.8	18	27	519	528	516	537	0.81
17	18	1.8	2.6e+03	-0.5	0.1	34	43	562	571	547	572	0.75
18	18	8.1e-05	0.12	13.4	2.1	6	43	601	637	599	638	0.82

Sequence Information

Coding Sequence: atgaGTTTACAAGACTTTGTATGTGATTACTGCAGTAGAACATTCACCAGGAAATACAATCTTCAAACGCATATAGAAAATTGTCATGTAAAATCGTCATGTTTTTGTGACATTTGCGAGAAGAAGTTTGGTAGTCCGGCAGGCTTGCAGCTCCACTTATCTCGTGGACATAACAGATTCGGCCAACCGTTCCCAGAATGCGACTTATGTGGTCGTATATTCACGAGAAAACAGAATATCATGTCGCACATGATCACCGCACATTTGCATGGAGTAGGCCCGGAGATACGGTGTGATTTATGCAACAAAACGTTTACGACTGAAAGAAATCTGAAACGGCATGTCAGTCAGTTACACAATCCTGATGTGGAGTACCCAACTTGTGACGATTGCCATAAAGTGTTCAAGGGAAAACAGTCTCTAATAACCCATATACAAGCACTACATAACCCTGGCAAGGGTCAAATAAGCTGCCGTTTATGTAATAAAGTCTACACAAATAACAGAAACTTGAAGAGGCATGTTGAGATGTTCCATGGGGAGAGAGGGGAGTACAGATGTGATATTTGCCCTAAAATATATACGTCCAATCAAAGTTTGAGACGCCATTTGCGTACAAGACATAATTCTGACGATCAAGAATCTGGACAATGtgtgttttgtaataaaattatacatggGAAAGATAATTTGGAGAGTCACATACAGCTTTATCATTCCCAAGATGATGGTAAAGTGAGTTTTTCATGTGAATGGTGTAATAAAAGTTTCAACGAAGAAGTGTTGTTACGAAGACATATTAAAAGTGATCACTCATTCAAATCGTTTTATAAATACTGCAAGCAGTCGTTAATAAGACAGATGTCGGAATCTCGGAAGAAGTTTCtatataattgtgaattttgtcCAAACGCTTTTGCAAGTGTTTATGAATTGAAGGATCATATGAGAGGAAGTCATGACACAGAGTATATACTTTCCACATGTAATGTATGCTTTGAGAAGTTCTACAGTAACGCGACAATGGCGTATCATAAGAAGTTTTGTGTCCCACCACCTAATGTGAACTCTTGCATTCATTGTGACAAATTATTCACTGTTATATCCAGCCTTGAATTTCACACAAGGATATTCCATCCGCAATCACAAATAGCTGATTCCAACATAACTTCAACCAATGACGATACGGATATCGGCTATTTTAAATGCAACCACTGTGACAGAGTTTACTACAGTGAACGGTCTTTAAAACACCACATTAAGCTAAAACACACCACTGATGAAGCAATGGAATGTGAATACTGTGGGAAAATATGCAGCAATAAATACTACCTCGCTTCTCATATCAAAATTGTACATAGCAACAACTCATGGTCCAAATGCGACTATTGTGAGAAGATATTTAAATCCAAAAGGAATATTCGACGACACATAGAGTACACGCATTTGGGCATGCAGAGATACAAGTGTATAGAATGTGAGACACTGTTCAAAGAGAAACGGAGTTTAAGAAAGCATGTGCGCACTAAACATCCAAACTCTGCCTCGTTTCCGCAATGTCATATATGTTACAAAAGATTCGAATCTGCAAAGTCTTGTAAGATACATTTGAAATTGTTGCATTCGTTCAATATGAACACATTTCCGTGCGATTTGTGTCCCGTCTCGTTTAATTCTAAGGAAGCACTGACTATACATCTACAGACAAAACATTTAGCTGAAGACGAGATTTACAAATGCGAAGAGTGCAACTTAGTTTTCAAAGGCCATGAGAAGTTTGAGCACCATAACGAAGTATGCCATGTTAGCTTACTTCCAAACATAAAACAGAAAGTACTCCCTCGTTGTATACTTTGCATGAAAGATTTTAGTACAAGGAAGACCTTAAAACGGCATATCAAGAAGTTCCATGAAGGATTTGATGTGGATGAGCTAGCCACTTTCGGGTCGAAACGAAGGACATTCAATATTGATTGTGAAGGATGTATCAAGAATTTCGGCGATGATTATTACTACCATATATATAACAAGTTGAAACATTTAAGAGATTCCATAATTTTCAAGTGTGAGGAATGTAAAGATTCGTATAATTCCTTGGAATATTCAATACAAAGGTATAAGTTGTTAAATATGGATGCGTGTAAGGGTAAAATGATTTTGAGCGAGCTGTGTACTACAGAAATGAGCGATGACGAAGCTTCGTTTTCTGGTTTTGGATCGCTCCATGAGTTTGTTGAGCCCGTGAGCACAACAATGGATATTAAATCAGAGTTTATGGTAGACTGTGAAATCAAGACTGAACCTTTATCACCATGA
Protein Sequence: MSLQDFVCDYCSRTFTRKYNLQTHIENCHVKSSCFCDICEKKFGSPAGLQLHLSRGHNRFGQPFPECDLCGRIFTRKQNIMSHMITAHLHGVGPEIRCDLCNKTFTTERNLKRHVSQLHNPDVEYPTCDDCHKVFKGKQSLITHIQALHNPGKGQISCRLCNKVYTNNRNLKRHVEMFHGERGEYRCDICPKIYTSNQSLRRHLRTRHNSDDQESGQCVFCNKIIHGKDNLESHIQLYHSQDDGKVSFSCEWCNKSFNEEVLLRRHIKSDHSFKSFYKYCKQSLIRQMSESRKKFLYNCEFCPNAFASVYELKDHMRGSHDTEYILSTCNVCFEKFYSNATMAYHKKFCVPPPNVNSCIHCDKLFTVISSLEFHTRIFHPQSQIADSNITSTNDDTDIGYFKCNHCDRVYYSERSLKHHIKLKHTTDEAMECEYCGKICSNKYYLASHIKIVHSNNSWSKCDYCEKIFKSKRNIRRHIEYTHLGMQRYKCIECETLFKEKRSLRKHVRTKHPNSASFPQCHICYKRFESAKSCKIHLKLLHSFNMNTFPCDLCPVSFNSKEALTIHLQTKHLAEDEIYKCEECNLVFKGHEKFEHHNEVCHVSLLPNIKQKVLPRCILCMKDFSTRKTLKRHIKKFHEGFDVDELATFGSKRRTFNIDCEGCIKNFGDDYYYHIYNKLKHLRDSIIFKCEECKDSYNSLEYSIQRYKLLNMDACKGKMILSELCTTEMSDDEASFSGFGSLHEFVEPVSTTMDIKSEFMVDCEIKTEPLSP*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00858779;
90% Identity: iTF_00858779;
80% Identity: iTF_00858779;