Lpop016414.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Laothoe populi
Gene Symbol
mod(mdg4)
Assembly
GCA_905220505.1
Location
HG992159.1:16019645-16020724[+]

Transcription Factor Domain

TF Family
BTB
Domain
zf-C2H2|ZBTB
PFAM
PF00651
TF Group
Zinc-Coordinating Group
Description
The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1e-27 4.4e-25 89.0 0.1 2 99 23 116 22 125 0.92

Sequence Information

Coding Sequence
ATGGCGTCGGACGAACAATTTTCACTATGTTGGAACAATTTCCATGCCAATATGTCAGCAGGCTTTCACGGCCTGCTGTCGCGTGGAGATCTAGTAGATGTAACATTGGCTGCCGAAGGCAGATTATTACAGGCACACAAATTAGTTTTATCAGTATGTTCTCCCTATTTTCAAGAAATGTTCAAAATGAATCCAACTCAACATCCGATAGtatttttaaaagaTGTTAGTCATTCAGCGTTAAGAGACTTATTACAGTTTATGTACCAAGGTGAAGTTAATGTTAAGCAAGAAGAGTTAGCATCGTTTATTAGTACCGCGGAACAGCTTCAAGTAAAAGGTTTAACCGGTAATCAAAATGAAGAAAGTTCCACGCCATCCAAACCAAAGCCGACGTCGAGGCCAGGCCCGAGGTCGTCACAACAAAGGCAATCTGTTATGACTAAGTTAGAGACTGATTTAGATTCTAAGCCCTCCTCAACTCCAGTAGCCGTTAAGAGACCAAATAGGCCATCAATAGCATCAAATAATTCGTCATCTTCACAAAGTGGACCTGCGAAACGAAAATGTGTAGACCCCTTAGAAGCAGGACCGTCTGGTTCTGCGAAAGAGGAATTCGTAACGATACCTGACGAAGATGAAAATAATGCTGTGGCCCCAAAAATGGAACCTGAATTTGTTAATGAAAGTATGTGGGATGACGATGACGATGGCACAAACAATGATGAAACGAATTTTGGCGAAGATGACTCTAATATGGAAATGACTGGATTTGATGGCTCTACAACTGGCGATGGTAATATAACTGGGGGCGGTGAAGGTGGAGCAGTAGGCGACGCACAAGGTAGGTTCGCAATTTCTTGTAGCGAGCAGTTGGTAGATAACATATCTATAAACTGCTTGATTGTTTTACCTACGTGA
Protein Sequence
MASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQVKGLTGNQNEESSTPSKPKPTSRPGPRSSQQRQSVMTKLETDLDSKPSSTPVAVKRPNRPSIASNNSSSSQSGPAKRKCVDPLEAGPSGSAKEEFVTIPDEDENNAVAPKMEPEFVNESMWDDDDDGTNNDETNFGEDDSNMEMTGFDGSTTGDGNITGGGEGGAVGDAQGRFAISCSEQLVDNISINCLIVLPT*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01439159;
90% Identity
iTF_01534081; iTF_00021442; iTF_00159970; iTF_00212674; iTF_00267330; iTF_00119718; iTF_01529323; iTF_00662350; iTF_00323618; iTF_00680707; iTF_00696579; iTF_00707107; iTF_00185444; iTF_00186404; iTF_00859620; iTF_00429160; iTF_01358985; iTF_01430057; iTF_00428270; iTF_00928836; iTF_01063881; iTF_00446356; iTF_00446357; iTF_00685590; iTF_01064794; iTF_00447387; iTF_00445340; iTF_00447388; iTF_00009189; iTF_00835717; iTF_00896997; iTF_01016869; iTF_00281510; iTF_00150759; iTF_00150758; iTF_00658535; iTF_01099911; iTF_00000456; iTF_00783657; iTF_01401417; iTF_01090915; iTF_00355329; iTF_00208997; iTF_00356421; iTF_01166853; iTF_00356422; iTF_00674409; iTF_00027893; iTF_00275445; iTF_00275446; iTF_01403574; iTF_00636632; iTF_00637817; iTF_00844505; iTF_00844506; iTF_00208029; iTF_00806846; iTF_00908991; iTF_01501279; iTF_00178346; iTF_01416970; iTF_00007245; iTF_01251962; iTF_01083487; iTF_00063723; iTF_00290827; iTF_01368235; iTF_01368233; iTF_01368234; iTF_01368237; iTF_00818445; iTF_01219886; iTF_01451630; iTF_01453383; iTF_01179599; iTF_01180421; iTF_00784528; iTF_00851952; iTF_00761809; iTF_01041937; iTF_01416017; iTF_00022930; iTF_01134930; iTF_00198355; iTF_01010515; iTF_00341456; iTF_01535059; iTF_01535058; iTF_00715892; iTF_00811157; iTF_00705153; iTF_00856769; iTF_00706149; iTF_00703078; iTF_00704134; iTF_00825927; iTF_00663208; iTF_01547978; iTF_00033035; iTF_00638763; iTF_01547979; iTF_00206220; iTF_00697487; iTF_00700239; iTF_00822097; iTF_00033939; iTF_00406868; iTF_00827124; iTF_01183028; iTF_01161493; iTF_01170709; iTF_00407703; iTF_00790423; iTF_00632889; iTF_00699354; iTF_01171578; iTF_01444028; iTF_00791325; iTF_00702112; iTF_00143174; iTF_00055566; iTF_00649250; iTF_00686483; iTF_00044630; iTF_01285685; iTF_00450294; iTF_00468278; iTF_00383831; iTF_01437207; iTF_00195270; iTF_00787800; iTF_01042776; iTF_00640537; iTF_01377624; iTF_00450298; iTF_01538906; iTF_00342331; iTF_00909819; iTF_01463419; iTF_00361756; iTF_01464284; iTF_00622109; iTF_00836701; iTF_00010270; iTF_00850910; iTF_00213663; iTF_00656255; iTF_00660436; iTF_00657337; iTF_00837695; iTF_00834764; iTF_00951967; iTF_00325542; iTF_01173407; iTF_00869792; iTF_01152305;
80% Identity
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