Lpop030416.1
Basic Information
- Insect
- Laothoe populi
- Gene Symbol
- -
- Assembly
- GCA_905220505.1
- Location
- HG992172.1:5393080-5398187[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 0.026 38 5.5 0.1 1 13 72 84 72 90 0.88 2 6 0.072 1e+02 4.1 0.0 23 44 340 360 332 362 0.85 3 6 0.073 1e+02 4.1 0.1 22 43 437 457 416 460 0.90 4 6 0.0091 13 7.0 0.2 22 46 564 593 547 593 0.74 5 6 6.8e-06 0.0097 17.0 0.1 2 45 642 694 641 695 0.82 6 6 2.5 3.6e+03 -0.8 0.1 23 39 816 831 799 837 0.78
Sequence Information
- Coding Sequence
- ATGGAGCAAGTGGTGGTCAAAACTGAAATGCAAAACAATGGAGAGATTTTGTTGTTTTATGTGGATgAGAATGGTGAAAATGAAGAAGGTGTCCTTACAACTGTTGAAAATATAGAAAATCCAGAAATACAATTACAACCTAACAATTACATAATTCCAGAACAAATTGAAACCTCTTATGAATTATCTGAAACTCCAGAATATACTGCGTCAAGGGAACGATGGACTGACGAAGAAACACAAAGACTATTGGTTTTCTACAatgataacaaacaaacatttctCACTGGTTCCACAAAGAGAAAGCATTTATGGACTATAGCCTGCAAGACCATGCTTACAAACAAAAATCCAACTGCATGTGACATGAAACTTAGAAACTTGAGAGCGAAATATATAGATACATGCAAAAATATGCATCGTATGGGTGATATAAGCGATCCATTGTTTAGTTTATGCCATCAGGCTTTCAGTGATGATTCGTATTTAAAATCTACAATAGAATCCACTAATAATGAGATAGAAATTGAATTTCCTGTTACTCAAAAGCTTGATGATGGTATTGTAGTTCTTAAAAGGGTTAACACAAACAAATCAATAGATGAAAAAGTTGAAAAAATGCTTcaattgtatataaaatacaaagagAGCTTCCAAAAGGAATATTTTACAAGGAACTTGTGGGAGACGATAGCTTTAGAAATAGGGGAAGAAGATGGGTTGTATTGGCAAAAACGTTTCCTCAATTTTAAACAACATTATATATGTGTACTTGAGAAACGTAAGGATGGGATTTGTGAAATCAACTGGCCGTATATGAAACTATTTGATCAAATATATAAGAATGATGAAGAGTTTCGTAAAAAATATCCTTTTATTGTTGATCTTCCAGCTGAAACACCAGTTGTTATTAATCATGACCACGATTGGCTCGAGACAGAAAAAATGGTTTTAGTAAAATACAAATATGACTGCTTTGAAGATTTTCAAGATCCGAAAATCCCGAATCATTTTCTCTGGACAGAAATAGGTAGACTCCTTGACAAAAGTCCAGAAGTTTGCAAAGATAAGTACGAAGAACTAAAACAAGAAcattataacaaatatttggAAGGAGGTTATGATATCCGCGAACGTAAACCATTAGACATTGTTTTTGATTACATTATATCCAAGGAAACTGAAatagaaataacaaaaaatgaGCCAATTGAATTGGCATTTGCTAAAGTTGAAGAGACTGATGAAATTGTCCAATTTATGTATGAAAATGTTGAAATGTTTAAAGATCCTATATGTTACTATGTTTGTTGGGGAATTATCAGCAagaaattaaaacaatctgTTGTTAGCTGTAGGAAGCAATGGGAAGAGTTAGTCACACTTTATAAATCTATTCTTGATGATAAAAAAGAGTATCCTGATATGCAAATAGATTGGAGATACATAGAACTGTTTGATAGAATATTTGATTACGGAATGGACATGAATTTGCTTGATGGATATGGAAAAACAAAGGAATCTGAAAAAATTGGTGTGAAGAAAGTACACATCAACATCAGTGATACTGAACGTAAGCTAACAGAAGAAGATGAATTTGATGAGAAGAACTCAAAACGCACTGGAGACTCGAAAGCGTTCAAAATTCTAGAATACTACCAAAAGAATAAAGACAAATTTTCCACAACCAATAGAAACAAACATAGTCTTTGGGAGATTTTGGCTAGGCAAATAGGCATTTCTGCTACTCAGTGCGCTCATAGATTTAGGAATCTCAAACAGGTGTACACAGCATATGTCCAAAGAGAGATAAATAAACCAGAAATGCCAATCGTTTGGCCATACTATGCTTTGTGTAAAAAAGTATTTGGATACAGGGCCATTAAAGCGAAGTTGAAGAATGGTAAAAATGATTCAGACACTGAAGAGTGGTCAGCTAAAGAAATAAATCAGTTGATTAATTACTTTGCTCAAAATTTTGATGAGATATCTAACAATGTTGATAATATGAGTAAATGGACTGCTTTGGCCAAAATGTTGGGTAAATCTAAAGTAGCATGCAAAGACAAATTTATGGAGTTAAGGAAATCCTACAGGAAATTAAAGACACAAATAACAAGGAATCCTAATGTAAAGATTTCATGGAAGTATTTCAATACTTTTGAGGAAATTTACAATTCTCGAGATAAAGTGAATCAAAACATAATGGAAGTGGATGAAAACGAAGACTACCAATGCATAATCGTGATTCCTGAGGATGCAGATGTTTCTAATATGGATGGTACTCATGTCATGATGGAAGAAGAAATAATTGAGCAACTCACAACCATAACTGAAACCAAACAACCACCTAAATGGACAAGGCGCATCAAGAAACGTCTTctcattttgtatataaattatataagagCAAATAAAGGGAAAGAAATTAATTCCAAAGAGATGTGGCAAGATATTGCAACAAAATTAGATAAGAAACCAGTCACttgcaaaaaaatgtttattagacTCAAGAATCTATACAAGAAGGTTGCAAGTAGTGATGATACAGAAAAGAAAACTGCAACATTGTATAAACTCATCGAAAAAGCGATTAATCTAAAACCCAAATTTATTAAAGTAGACCAAAATAAAGCACaagaagaaaaagtatataaagatGTACCAATGGATGCAGTAAAAGTTGACAAGGCACTACAATACTATATGCAGCATATTGAAGATTTCGTCAGTCCGAAATTCGAAAAGAACTATTTATGGACAGAATTGGCTGAATACATATCAGAGCCAGTTAACACAGTTATCAATAAAGTCAGTTATTTAAAACAAGCATACAATAATGATCAAATTACAGAAGATAATACACAATTTATAGATGTTTTGCGCGAAATAGCAGCTAAAGAATTGGCTATAACACTTATATCTGATTTTGAAAATGATGCCGCAAAGGAATATCCAGAGAGACTGTGGATTGACGAAGAAACAGAGCAATTATTGCAGTGGTACTTGAGCAATTTGGACAAATTCAAAAATCCAAAATTCGTTCGCACCTACCTCTGGATCGAGGCatctaatattttaaaaaggagTCCATTGGATTGCTCTAAGAAGATGTCTGAAATACGGACTCAATATCGCAACATGGTTCGGGAAAATTCAGAAGAATTGGTCAATTGGAAGTTTTATGACTTGTGTCAGAAAATTTACGGAACGGGGAAGAAAACGAATCCTGCGAGTGCTTAA
- Protein Sequence
- MEQVVVKTEMQNNGEILLFYVDENGENEEGVLTTVENIENPEIQLQPNNYIIPEQIETSYELSETPEYTASRERWTDEETQRLLVFYNDNKQTFLTGSTKRKHLWTIACKTMLTNKNPTACDMKLRNLRAKYIDTCKNMHRMGDISDPLFSLCHQAFSDDSYLKSTIESTNNEIEIEFPVTQKLDDGIVVLKRVNTNKSIDEKVEKMLQLYIKYKESFQKEYFTRNLWETIALEIGEEDGLYWQKRFLNFKQHYICVLEKRKDGICEINWPYMKLFDQIYKNDEEFRKKYPFIVDLPAETPVVINHDHDWLETEKMVLVKYKYDCFEDFQDPKIPNHFLWTEIGRLLDKSPEVCKDKYEELKQEHYNKYLEGGYDIRERKPLDIVFDYIISKETEIEITKNEPIELAFAKVEETDEIVQFMYENVEMFKDPICYYVCWGIISKKLKQSVVSCRKQWEELVTLYKSILDDKKEYPDMQIDWRYIELFDRIFDYGMDMNLLDGYGKTKESEKIGVKKVHINISDTERKLTEEDEFDEKNSKRTGDSKAFKILEYYQKNKDKFSTTNRNKHSLWEILARQIGISATQCAHRFRNLKQVYTAYVQREINKPEMPIVWPYYALCKKVFGYRAIKAKLKNGKNDSDTEEWSAKEINQLINYFAQNFDEISNNVDNMSKWTALAKMLGKSKVACKDKFMELRKSYRKLKTQITRNPNVKISWKYFNTFEEIYNSRDKVNQNIMEVDENEDYQCIIVIPEDADVSNMDGTHVMMEEEIIEQLTTITETKQPPKWTRRIKKRLLILYINYIRANKGKEINSKEMWQDIATKLDKKPVTCKKMFIRLKNLYKKVASSDDTEKKTATLYKLIEKAINLKPKFIKVDQNKAQEEKVYKDVPMDAVKVDKALQYYMQHIEDFVSPKFEKNYLWTELAEYISEPVNTVINKVSYLKQAYNNDQITEDNTQFIDVLREIAAKELAITLISDFENDAAKEYPERLWIDEETEQLLQWYLSNLDKFKNPKFVRTYLWIEASNILKRSPLDCSKKMSEIRTQYRNMVRENSEELVNWKFYDLCQKIYGTGKKTNPASA*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00341277;
- 90% Identity
- -
- 80% Identity
- -