Basic Information

Gene Symbol
-
Assembly
GCA_905220505.1
Location
HG992172.1:5393080-5398187[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 0.026 38 5.5 0.1 1 13 72 84 72 90 0.88
2 6 0.072 1e+02 4.1 0.0 23 44 340 360 332 362 0.85
3 6 0.073 1e+02 4.1 0.1 22 43 437 457 416 460 0.90
4 6 0.0091 13 7.0 0.2 22 46 564 593 547 593 0.74
5 6 6.8e-06 0.0097 17.0 0.1 2 45 642 694 641 695 0.82
6 6 2.5 3.6e+03 -0.8 0.1 23 39 816 831 799 837 0.78

Sequence Information

Coding Sequence
ATGGAGCAAGTGGTGGTCAAAACTGAAATGCAAAACAATGGAGAGATTTTGTTGTTTTATGTGGATgAGAATGGTGAAAATGAAGAAGGTGTCCTTACAACTGTTGAAAATATAGAAAATCCAGAAATACAATTACAACCTAACAATTACATAATTCCAGAACAAATTGAAACCTCTTATGAATTATCTGAAACTCCAGAATATACTGCGTCAAGGGAACGATGGACTGACGAAGAAACACAAAGACTATTGGTTTTCTACAatgataacaaacaaacatttctCACTGGTTCCACAAAGAGAAAGCATTTATGGACTATAGCCTGCAAGACCATGCTTACAAACAAAAATCCAACTGCATGTGACATGAAACTTAGAAACTTGAGAGCGAAATATATAGATACATGCAAAAATATGCATCGTATGGGTGATATAAGCGATCCATTGTTTAGTTTATGCCATCAGGCTTTCAGTGATGATTCGTATTTAAAATCTACAATAGAATCCACTAATAATGAGATAGAAATTGAATTTCCTGTTACTCAAAAGCTTGATGATGGTATTGTAGTTCTTAAAAGGGTTAACACAAACAAATCAATAGATGAAAAAGTTGAAAAAATGCTTcaattgtatataaaatacaaagagAGCTTCCAAAAGGAATATTTTACAAGGAACTTGTGGGAGACGATAGCTTTAGAAATAGGGGAAGAAGATGGGTTGTATTGGCAAAAACGTTTCCTCAATTTTAAACAACATTATATATGTGTACTTGAGAAACGTAAGGATGGGATTTGTGAAATCAACTGGCCGTATATGAAACTATTTGATCAAATATATAAGAATGATGAAGAGTTTCGTAAAAAATATCCTTTTATTGTTGATCTTCCAGCTGAAACACCAGTTGTTATTAATCATGACCACGATTGGCTCGAGACAGAAAAAATGGTTTTAGTAAAATACAAATATGACTGCTTTGAAGATTTTCAAGATCCGAAAATCCCGAATCATTTTCTCTGGACAGAAATAGGTAGACTCCTTGACAAAAGTCCAGAAGTTTGCAAAGATAAGTACGAAGAACTAAAACAAGAAcattataacaaatatttggAAGGAGGTTATGATATCCGCGAACGTAAACCATTAGACATTGTTTTTGATTACATTATATCCAAGGAAACTGAAatagaaataacaaaaaatgaGCCAATTGAATTGGCATTTGCTAAAGTTGAAGAGACTGATGAAATTGTCCAATTTATGTATGAAAATGTTGAAATGTTTAAAGATCCTATATGTTACTATGTTTGTTGGGGAATTATCAGCAagaaattaaaacaatctgTTGTTAGCTGTAGGAAGCAATGGGAAGAGTTAGTCACACTTTATAAATCTATTCTTGATGATAAAAAAGAGTATCCTGATATGCAAATAGATTGGAGATACATAGAACTGTTTGATAGAATATTTGATTACGGAATGGACATGAATTTGCTTGATGGATATGGAAAAACAAAGGAATCTGAAAAAATTGGTGTGAAGAAAGTACACATCAACATCAGTGATACTGAACGTAAGCTAACAGAAGAAGATGAATTTGATGAGAAGAACTCAAAACGCACTGGAGACTCGAAAGCGTTCAAAATTCTAGAATACTACCAAAAGAATAAAGACAAATTTTCCACAACCAATAGAAACAAACATAGTCTTTGGGAGATTTTGGCTAGGCAAATAGGCATTTCTGCTACTCAGTGCGCTCATAGATTTAGGAATCTCAAACAGGTGTACACAGCATATGTCCAAAGAGAGATAAATAAACCAGAAATGCCAATCGTTTGGCCATACTATGCTTTGTGTAAAAAAGTATTTGGATACAGGGCCATTAAAGCGAAGTTGAAGAATGGTAAAAATGATTCAGACACTGAAGAGTGGTCAGCTAAAGAAATAAATCAGTTGATTAATTACTTTGCTCAAAATTTTGATGAGATATCTAACAATGTTGATAATATGAGTAAATGGACTGCTTTGGCCAAAATGTTGGGTAAATCTAAAGTAGCATGCAAAGACAAATTTATGGAGTTAAGGAAATCCTACAGGAAATTAAAGACACAAATAACAAGGAATCCTAATGTAAAGATTTCATGGAAGTATTTCAATACTTTTGAGGAAATTTACAATTCTCGAGATAAAGTGAATCAAAACATAATGGAAGTGGATGAAAACGAAGACTACCAATGCATAATCGTGATTCCTGAGGATGCAGATGTTTCTAATATGGATGGTACTCATGTCATGATGGAAGAAGAAATAATTGAGCAACTCACAACCATAACTGAAACCAAACAACCACCTAAATGGACAAGGCGCATCAAGAAACGTCTTctcattttgtatataaattatataagagCAAATAAAGGGAAAGAAATTAATTCCAAAGAGATGTGGCAAGATATTGCAACAAAATTAGATAAGAAACCAGTCACttgcaaaaaaatgtttattagacTCAAGAATCTATACAAGAAGGTTGCAAGTAGTGATGATACAGAAAAGAAAACTGCAACATTGTATAAACTCATCGAAAAAGCGATTAATCTAAAACCCAAATTTATTAAAGTAGACCAAAATAAAGCACaagaagaaaaagtatataaagatGTACCAATGGATGCAGTAAAAGTTGACAAGGCACTACAATACTATATGCAGCATATTGAAGATTTCGTCAGTCCGAAATTCGAAAAGAACTATTTATGGACAGAATTGGCTGAATACATATCAGAGCCAGTTAACACAGTTATCAATAAAGTCAGTTATTTAAAACAAGCATACAATAATGATCAAATTACAGAAGATAATACACAATTTATAGATGTTTTGCGCGAAATAGCAGCTAAAGAATTGGCTATAACACTTATATCTGATTTTGAAAATGATGCCGCAAAGGAATATCCAGAGAGACTGTGGATTGACGAAGAAACAGAGCAATTATTGCAGTGGTACTTGAGCAATTTGGACAAATTCAAAAATCCAAAATTCGTTCGCACCTACCTCTGGATCGAGGCatctaatattttaaaaaggagTCCATTGGATTGCTCTAAGAAGATGTCTGAAATACGGACTCAATATCGCAACATGGTTCGGGAAAATTCAGAAGAATTGGTCAATTGGAAGTTTTATGACTTGTGTCAGAAAATTTACGGAACGGGGAAGAAAACGAATCCTGCGAGTGCTTAA
Protein Sequence
MEQVVVKTEMQNNGEILLFYVDENGENEEGVLTTVENIENPEIQLQPNNYIIPEQIETSYELSETPEYTASRERWTDEETQRLLVFYNDNKQTFLTGSTKRKHLWTIACKTMLTNKNPTACDMKLRNLRAKYIDTCKNMHRMGDISDPLFSLCHQAFSDDSYLKSTIESTNNEIEIEFPVTQKLDDGIVVLKRVNTNKSIDEKVEKMLQLYIKYKESFQKEYFTRNLWETIALEIGEEDGLYWQKRFLNFKQHYICVLEKRKDGICEINWPYMKLFDQIYKNDEEFRKKYPFIVDLPAETPVVINHDHDWLETEKMVLVKYKYDCFEDFQDPKIPNHFLWTEIGRLLDKSPEVCKDKYEELKQEHYNKYLEGGYDIRERKPLDIVFDYIISKETEIEITKNEPIELAFAKVEETDEIVQFMYENVEMFKDPICYYVCWGIISKKLKQSVVSCRKQWEELVTLYKSILDDKKEYPDMQIDWRYIELFDRIFDYGMDMNLLDGYGKTKESEKIGVKKVHINISDTERKLTEEDEFDEKNSKRTGDSKAFKILEYYQKNKDKFSTTNRNKHSLWEILARQIGISATQCAHRFRNLKQVYTAYVQREINKPEMPIVWPYYALCKKVFGYRAIKAKLKNGKNDSDTEEWSAKEINQLINYFAQNFDEISNNVDNMSKWTALAKMLGKSKVACKDKFMELRKSYRKLKTQITRNPNVKISWKYFNTFEEIYNSRDKVNQNIMEVDENEDYQCIIVIPEDADVSNMDGTHVMMEEEIIEQLTTITETKQPPKWTRRIKKRLLILYINYIRANKGKEINSKEMWQDIATKLDKKPVTCKKMFIRLKNLYKKVASSDDTEKKTATLYKLIEKAINLKPKFIKVDQNKAQEEKVYKDVPMDAVKVDKALQYYMQHIEDFVSPKFEKNYLWTELAEYISEPVNTVINKVSYLKQAYNNDQITEDNTQFIDVLREIAAKELAITLISDFENDAAKEYPERLWIDEETEQLLQWYLSNLDKFKNPKFVRTYLWIEASNILKRSPLDCSKKMSEIRTQYRNMVRENSEELVNWKFYDLCQKIYGTGKKTNPASA*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00341277;
90% Identity
-
80% Identity
-