Basic Information

Gene Symbol
-
Assembly
GCA_036417725.1
Location
CM071163.1:4608469-4612838[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 7 0.03 34 5.2 0.1 1 13 73 85 73 91 0.87
2 7 0.0067 7.7 7.3 0.0 21 45 336 361 333 362 0.86
3 7 0.012 14 6.4 0.1 22 43 439 459 421 462 0.85
4 7 0.0031 3.6 8.3 0.3 22 46 571 599 553 599 0.76
5 7 0.001 1.2 9.9 0.0 3 45 649 700 647 701 0.79
6 7 3.4 3.9e+03 -1.4 0.1 22 36 822 842 799 851 0.62
7 7 8 9.1e+03 -2.6 1.1 3 14 1002 1013 1000 1016 0.86

Sequence Information

Coding Sequence
ATGGAGCAAGTGGTGGTCAAAACAGAAATGCAAAATAATGgggaaatattattattctatgtGGACGagAATGGAGAAAATGAAGAGGGAGTGCTCACAACTGTTGAAAATATAGAAGATCCAAATGTACAGTTGCAACCTAGTGACTCATACATAATTGAGGATCCACAGGGAACCACATATCAATTATCCCATACATCAGAACATTCTGTTTCAAAGGAAAGATGGACTGATGAAGAAACACAAAGACTGTTGGTCTTCTATAACGATAATAAACAGACATTTCTCACTGGTTCCACAAAAAGAAAGCATTTGTGGACAATTGCATGCAAAACCATGCTTATGAACAAAAATCCTACAGCATGCGACATGAAACTAAGAAATTTGAAAGCAAAATACATAGACACATGTAAAAATATGCATCGTGCCGGTGATATAAGTGATCCATTATTTAGTTTATGTCACCAGGCCTTTAGTGATGAAGctttaaaaactaaaatggAATCAAGTAGCGATGGGACAGCAACCCAGCTTCCTATACCCCAAAAACTTGATGATAGTGTTGTTGTTCTCAAAAAGGTAAATTCCAACAAATCAGTTGATGAAAAGGTGGAAAAGATGCTTCAATTGTACGTAAAAAATAAGGAAAACTTCAAAAAGGAGTATTTTACAAGGAGTTTGTGGGAGACAATTGCCTTGGAGGTAGGGGAAGATGGCTTGTACTGGCAAAAAAGATTCCTTAATTTCAAACAACATTACATATCCTTACTTGAGAAACGTAAAGATGGTGTATCTGAAATAAACTGGCCTTATATGAAATTGTTTGATGAAATTTATAAAGATGATGATGAGTTTCGTAAAAAATATCCTTTTATTGCACCTGATATTATAGTTGAAGTACCAATTATTACTAATCATGATTATGATTGGTTAGAGACAGAGAAAATGGTGCTAGTCAAATACCAATATGACTGTTTTGATGATTTCCAAGATccaaaaattccaaataattTTCTCTGGACAGAAATTGGCAGACTTTTAGACAAAAGCCCAGATGCTTGCAAAAGCAAGTACATGGAATTAAAACAAGAACATTTTGATAAGTATTTGAATGGTGGTTATGATTTGCGTGAACGCAAGCCTTTAGACATTGTGTTTGATTACATTATATCAAAAGAAATTGAAGTAGAATTAACTAAAAGAGAGCCAGATCAAGTTTCGGTTAATAATAGTAAAgttgaagagattgatgaaattGTACAATTTCTATATGAAAATATAGAAATGTTTAAAGATCCTGtatgttattatgtttgttGGGGAATTATTAGTAAGAAATTAAACCAATCTGTTGTTAGTTGTCGAAGGAAATGGGAAGATTTAGTAATTCTGTATAAGAGTATTCTTAATGACAAAAAAGAATATCCTGATATGCAAATAGACTGGAGATACATAGAGTTGTTTGATAGAATATTTGATTATGGAATGGATACGAATTTACTTGAGGGATATGAGAAAACTAAGGAAACCAAGGAATCTGATAAAGTCTGtgTtaaaaaagtaaacatcaatTTTAATGACACTGAAGATAAGCCAAATGATGAAGATGAGTTATTTGATGTGAAAAGCTCAAAACGTACCGGGGACTCAAAGGCATTCAAAATTCTGGAATACTATCAAAAGAATAAAGATAAATTTTCAACTACCAATCGAAACAAACATAATCTTTGGGAAATATTAGCTAAAAAGATAGGCATTTCTGCTACTCAATGTGCTCATAGATTCAGAAATCTCAAACAAGTTTACACAGCCTATGTCCAAAGAGAGATGAATAAACCAGAAATGCCAATTGTATGGCCATACTATGCATTATGCAAAAAAGTTTTTGGTTATCGAGCTATTAAAGCTAAGTTGAAAAATGGTAAAAATGATTCAGACACAGAAGAATGGTCAGCTAAGGATATAAATCAATTGATTAACTATTTTGCTCAGAATTTTGAGGCAATATCAAACAATGTTGATGATATGAGCAAATGGGCGCCTTTGGCGAAAATCTTGGATAAATCTAAGGTGTCTTGCAAAGATAAGTTTATGGAGTTGCGGAAGTCTTATAGGAAATTGAAAACACAAATAACGAGGAATCCTAATGTTAAAATTTCAtggaaatatttcaatatttttgaagAGATATATAATCCAAAAGAAAAAGTATACCAAAGTATGATGGAGGTAGATGAGCAACATCaagaaaataatgaactagaagaAGAAGATTACCAGTGCATAATCGTCATTCCGGAGGATGCTGATATTACTAACATTGATAGTTCTCAAGTGACTATTGAAGAAACAACTGAACAACCTTCAATAACAATTGAACCAAAACAACCACTTACATGGACAAGACGCCTCAAGAAACGTCTTCTTGTATTGTACATTAATTATATAAGAGCAAATAAGGGAAAAGAAATAAGTTCAAAAGAAATGTGGCAAGAAATAGCTACAAAATTGGACAAGAAACCAATTACCTGCAGAAAAATGTATATCAGACTCAAGAATCTTTACAAAAAAGTTGCAAATAGCGAAGATTCTGCAAAGAAAACTGCACCGTTGTATCGACTTATCGAAAAAGCTATTAAGTGTAAACCGAAGTTCATCAAAGTTgatcaaaataaaacacaagaAAAAGTTTATAAAGATGTACAGATGGATGTAGAGAAAGTAGACAAAGCTCTGCAATACTATATGCAACACATTGATGACTTTGTCAATCCTAAATTCGAAAAGAAATTCTTATGGACAGAATTGGCTAACTATGTATCAGAACCaatcaataaagtttttaataaagttaattatttgAAGCAAGCATACAATAATGATCAACTTACGGAAGATCATGTGCAATTTGTGGATGTATTGAGAGAAATAGCAGCCAAAGAATTAGCAATAACTCTTATAGCTGATTTTGAAAGTGACACTGCAACGGAGTATCCAGAGAGAGATTGGGTTGACGAAGAAGCGGAGCAGTTATTGCAATGGTACTTGAGCAATTTAGACAAATTCAAGAATCCGAAATTCGTTCGGAGTTACCTTTGGATCGAGGCGTCTAATATTTTAAGACGAAGCCCTTTAGATTGCTCTAAAAAGATGTCGGAAATAAGAACACTGTATCGAAATATGGTTCGGGAGAATTCGGAAGAACTGACTAATTGGAAGTTTTATGACTTGTGCCAGAAAATTTACGGGACGGGGAAGAAAGCGAGTACTATGGGTGCTTAA
Protein Sequence
MEQVVVKTEMQNNGEILLFYVDENGENEEGVLTTVENIEDPNVQLQPSDSYIIEDPQGTTYQLSHTSEHSVSKERWTDEETQRLLVFYNDNKQTFLTGSTKRKHLWTIACKTMLMNKNPTACDMKLRNLKAKYIDTCKNMHRAGDISDPLFSLCHQAFSDEALKTKMESSSDGTATQLPIPQKLDDSVVVLKKVNSNKSVDEKVEKMLQLYVKNKENFKKEYFTRSLWETIALEVGEDGLYWQKRFLNFKQHYISLLEKRKDGVSEINWPYMKLFDEIYKDDDEFRKKYPFIAPDIIVEVPIITNHDYDWLETEKMVLVKYQYDCFDDFQDPKIPNNFLWTEIGRLLDKSPDACKSKYMELKQEHFDKYLNGGYDLRERKPLDIVFDYIISKEIEVELTKREPDQVSVNNSKVEEIDEIVQFLYENIEMFKDPVCYYVCWGIISKKLNQSVVSCRRKWEDLVILYKSILNDKKEYPDMQIDWRYIELFDRIFDYGMDTNLLEGYEKTKETKESDKVCVKKVNINFNDTEDKPNDEDELFDVKSSKRTGDSKAFKILEYYQKNKDKFSTTNRNKHNLWEILAKKIGISATQCAHRFRNLKQVYTAYVQREMNKPEMPIVWPYYALCKKVFGYRAIKAKLKNGKNDSDTEEWSAKDINQLINYFAQNFEAISNNVDDMSKWAPLAKILDKSKVSCKDKFMELRKSYRKLKTQITRNPNVKISWKYFNIFEEIYNPKEKVYQSMMEVDEQHQENNELEEEDYQCIIVIPEDADITNIDSSQVTIEETTEQPSITIEPKQPLTWTRRLKKRLLVLYINYIRANKGKEISSKEMWQEIATKLDKKPITCRKMYIRLKNLYKKVANSEDSAKKTAPLYRLIEKAIKCKPKFIKVDQNKTQEKVYKDVQMDVEKVDKALQYYMQHIDDFVNPKFEKKFLWTELANYVSEPINKVFNKVNYLKQAYNNDQLTEDHVQFVDVLREIAAKELAITLIADFESDTATEYPERDWVDEEAEQLLQWYLSNLDKFKNPKFVRSYLWIEASNILRRSPLDCSKKMSEIRTLYRNMVRENSEELTNWKFYDLCQKIYGTGKKASTMGA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00858501;
90% Identity
-
80% Identity
-