Lstr021462.1
Basic Information
- Insect
- Laodelphax striatellus
- Gene Symbol
- Trerf1
- Assembly
- GCA_014465815.1
- Location
- CM025324.1:5857883-5880018[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.3e-09 9e-06 27.0 0.1 2 46 846 890 845 890 0.96
Sequence Information
- Coding Sequence
- ATGTCCGAGCCCGGCGGCAGTAAACAGGAATTTGTGAATATTGGATATTCCCGATTCCCTGTGGTGTTCCACCATCGTTCCTCCCTTAACAAAAAGGGTCAAGAACAACCACTACGCTGTCTGTCCCTTCGCGTATCAACCAACCACTGTTTTTGTCCGATTCGAAAACTTTCGGTTCCGATTCGTTTTTTATTACTGTCGGAGCGATACGATCGTTGTCAATACGATCTATTACACAGGCCGAATTCGGCAGTTCCTTGCCCTGCAGTAGATTCCGACTCGAAAAAATGCGAGAAAAAAGAGACCGCGGGCCCTCCACTTCAAACAGCCAGCATGAGTGTGAGAGCTCTGATCGAGGAGAAGATTATTCAAAAACGCATCACCAACCCCAGCCTTGCTGCACATACGCAGACCAACTTAACCTATTCAACGGCTGAAACGAGTAGCAGATACTCAGGCACACCACCCTCAGATCCCGAACTGGCGATCAAAATATCGTCGTTTGTGGTGCCGGCGACGCCGACTGCGGGAAACGCCGCAAACAACGGCGGCAGCTGTAGCGATCGAACCGCGCTGCGCAGGCATTCCGATTCGGAGCACTTTGTGTCGCCGCGGACGGTTGACACCGTTCCGGTTTCCGTTCCGGTTTCCGTTGCGGTTTCCGCCGACGGCGGCGGCAAAAAGCAGAACGGCGGAACGCTGACGGTGGCCGTGTCAGCCGGCACCAAGATGGCCGTCAATTCGCTCATCAAACGCGCCAGCTCTGATCCGGGCGTGCAGCCTGAAAGCCCTGGTCCTCAATTGCATCTGAACGAGACAGCCTATTCGTTGGGATTGTACAGCAGTGAAGATGCCGACTACTTTTCGCCCAGCCTGCAAGAGGATGTTTTCCAACAAGTGCAGTCGGTGCAAGATTCCATGCTGCTGCAAGGAGTTGATCCCCAACAGCTGGCCGAATCTATTCAGGCAGCAGCTCTACAAGACATCGCCTCGCTTGAGGAGTACCAGAACTCACCCAGTAGCCAGCAGTTCCAACACCATCAGGATCTGCAGTCGGTGCTCAACTCGCCGCTACCTGTGGGTCTGGCAGACTTCGCCTATTCGCACAACCAGGGCGGCTCCGGATCACAAAAGGACAACGCCTTCCAATCGGGAGACACCAAGGACTTTGTCGGGTACTCGCAATCGCCTCTCCCGTCACCCAGCTTCACTTATCCGACACCTCCCGCTAGTCAGGAGGGTCAATCGCCTTCGTTCGGACCTCTGCAGTCCGTCATCTCGCAAGGTCCCGTGTCCTCGCCTCTGTCCGCTGCTTTCTACACTTCCGCCATGTCTAGCTCAGCAGCTGTCGAGGCAGCTCTCAACGAGGTGCTACCTCTCGACTCCTCCCAAAACGTCTACCCCTCTCCGCCTCCTCAGTCGCCTCTCTCCGCCACTCCGGTACCCTCCCCCCTCTCCTTGCCGGCATCCTCCTCTTCACCCCTCCCGCATGCCCTGCAGTCCCAAATGATGCCTGGCTCGGACGATCCACTGCTCTCCAGCAGTCCCAAGGATTTCGCGTCCAAAAAGCGGTTCGATTTTCAAACGTTCAAGGTGCTGAACAACGGCACAGTGGACCTCGGTTCAGCCGGCTCGCAAAGTCTAACCGGCATCGTGCTGGACCGCAACGGCGAACTGAAACTTGTGACCTCCTATCAGCCAATCAAAACGTCAGCGGTCGTGAACGGCACAACGGCCGTGTTCGTCAACACGAGGCCGAAGACAGAACTGATCAGCGACACGGGACGACTGCTGAAGACAACCACGCTGACGGGAAAGGTGGTGACTGCCGGCGGACGACTGCTGACTACCGGTCAGCAGCTGAGAACCGCTAACATCGGAACCACCATGAAACTCCTTGATCACATCAAAGAGGAGATTGATGATGATGTCTTCCTCAGTCCCACCACTATACCGGCCAGCCCAGTGCGATACTCGAGGAAGAGACCGAGACTGGATGGCTCCAACAGCCACAACTTCTCCTATCCTTCAAGACTGCGCGCCACCCGCCACTCATCCAGCTCGCTGCCCTACACGCCACCCCCCATTCTGCCTCCCACCAGGAATGGCCAGGGCCTCTACTGGCAGGCAATCACTACCTGGCCTAGTTCAACTACTTTCAAAGGAGAATTGTCGAGTGGTGACGATATGGCGCCGGAAAGTGATGCACTTCCTCACATAAATATCGGGCCTCACCATCAGGCGTCAATACCGCAGTGGCAGGGTAATCAGGTGGTTGACGAGCGGGAGCCATCGCACGAACACCTGCTCTGGGATCCTGGCATCAGCAAACTCACATCTGATAATGAAGTTGAAATGTACCTGGAATTTGCGTGCTGTGCTGCAGTTCCTGGGGGTGGCCGCAATAAGGAATATGCTTTGCATTTGCTACATCTGTCAAATGGAAATATCCATGAGGCGATGTTGAAACTGATGCAGCCAACACCTAGCTTGCCAGCCGGTCACCCGCTGCTCTCTTTCGAGTACACGGACAGTGAACGGTGGAGTGCCTACGAGATGGAAGCCTTCCACCAGGGTCTGCTCAAGTACGACAAGGACTTCTCTTGTATAGCGCAAGAGGTCGGATCAAAGACAGTAAAGCAATGTGTTCAGTTCTACTACCTATGGAAGAAGATTTGTGCAGAGGATTATAAACGCTTACGATTAAGTAGACGTAAAAATAAGGAAACTGATTACGACTTCGACTACATTAAAACAGACATTCCTGCCAGTGATGTGGAACTGGTATCAACAAGCTCCGAGAGCCGTCTATTTGTCTGTGAATACCCAGACTGTTCTGCTAGCTTCAACTCGAGGGCGGCGCTGAACGGGCACATCCGCATCCACGGCGGCGGCGCCTGCAACCGCTGTCCGACGCCCGACAAGCGCCATCAGCTGACCGGCTCCACCCATCACAGCGAGCCCATCGAAGAGTTTCCCTGCAAAATATGCGGGAAAGTTTTCAACAAGGTGAAAAGTCGGAGCGCGCACATGAAATCGCACCGGCCGCCGGACGCCGAGCCGAAAAAGCCGAAACTGGATCCTCATAAGCTGGAAATGGCCGAGCAGACGGTAGGCCGCGCCATGGGCGTCACGTCCTCCTCTATAACGGTGCAACGGCATTTATAG
- Protein Sequence
- MSEPGGSKQEFVNIGYSRFPVVFHHRSSLNKKGQEQPLRCLSLRVSTNHCFCPIRKLSVPIRFLLLSERYDRCQYDLLHRPNSAVPCPAVDSDSKKCEKKETAGPPLQTASMSVRALIEEKIIQKRITNPSLAAHTQTNLTYSTAETSSRYSGTPPSDPELAIKISSFVVPATPTAGNAANNGGSCSDRTALRRHSDSEHFVSPRTVDTVPVSVPVSVAVSADGGGKKQNGGTLTVAVSAGTKMAVNSLIKRASSDPGVQPESPGPQLHLNETAYSLGLYSSEDADYFSPSLQEDVFQQVQSVQDSMLLQGVDPQQLAESIQAAALQDIASLEEYQNSPSSQQFQHHQDLQSVLNSPLPVGLADFAYSHNQGGSGSQKDNAFQSGDTKDFVGYSQSPLPSPSFTYPTPPASQEGQSPSFGPLQSVISQGPVSSPLSAAFYTSAMSSSAAVEAALNEVLPLDSSQNVYPSPPPQSPLSATPVPSPLSLPASSSSPLPHALQSQMMPGSDDPLLSSSPKDFASKKRFDFQTFKVLNNGTVDLGSAGSQSLTGIVLDRNGELKLVTSYQPIKTSAVVNGTTAVFVNTRPKTELISDTGRLLKTTTLTGKVVTAGGRLLTTGQQLRTANIGTTMKLLDHIKEEIDDDVFLSPTTIPASPVRYSRKRPRLDGSNSHNFSYPSRLRATRHSSSSLPYTPPPILPPTRNGQGLYWQAITTWPSSTTFKGELSSGDDMAPESDALPHINIGPHHQASIPQWQGNQVVDEREPSHEHLLWDPGISKLTSDNEVEMYLEFACCAAVPGGGRNKEYALHLLHLSNGNIHEAMLKLMQPTPSLPAGHPLLSFEYTDSERWSAYEMEAFHQGLLKYDKDFSCIAQEVGSKTVKQCVQFYYLWKKICAEDYKRLRLSRRKNKETDYDFDYIKTDIPASDVELVSTSSESRLFVCEYPDCSASFNSRAALNGHIRIHGGGACNRCPTPDKRHQLTGSTHHSEPIEEFPCKICGKVFNKVKSRSAHMKSHRPPDAEPKKPKLDPHKLEMAEQTVGRAMGVTSSSITVQRHL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00858150; iTF_00283496; iTF_00284098; iTF_01353687; iTF_01354211;
- 90% Identity
- iTF_01353687;
- 80% Identity
- iTF_00858150;