Ccar029181.1
Basic Information
- Insect
- Catonia carolina
- Gene Symbol
- Trerf1
- Assembly
- GCA_035578175.1
- Location
- JAQMRL010000003.1:93728485-93780499[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.1e-10 2.7e-06 29.1 0.0 2 46 845 889 844 889 0.96
Sequence Information
- Coding Sequence
- ATGCAGCTGATCATGCAATCAACTGTGTGTGAGCATCAAATCAATATTGTAAAACCTATGGCAGCGGCCTATGGAACTTTAAGCAAACCAGTTGCAACCGCTGTAGCTATAGCTACAACGGTTGCACCGACACCTGCTCCTGTTACCACCGCCTCTACCGTTACAGTAGCTGCTCCTACTCCAAAACCTGTAGAGTGTAACCTTTGTCACCGAAAATTTAAGAATATACCAGCACTTAATGGACATATGCGATTACATGGAGGTTATTTTAAGAAGGATTCAGATTCAAAAAAATGCGAGAAAAAGGAAACGACAGGACCCCCACTTCAAACAGCAAGCATGAGTGTGAGAGCACTCATTGAAGAAAAGATAATTCAAAAACGAATCACAAATCCCAGCCTTGCAGCACATACGCAAACAAATCTTACATATTCAAcAGCAGAACCTAGTAGAGTAACAGCACCACCTCAGTACCCAGGTACACCACCATCTTCTGAACccgaattaaatataaaaatatcttcTTTCGTTGTACCTGCTGCTCCAACGATTGCAAACAATGACAAAAATGCATCAAGAAGACACTCAGACTCTGAACACTTTGTACCACCTCGGATACCGCAAAATGAAGCCGTCCctaataatgaaaagaaaattacgACCACTGCTGCGATGACTACAACTACATCTACATCTAAAGTTGCTATAGCATCAATGGTCAAGCGGTCTAGTTCCGATCCTGGTACACAACCACAGAGCCCCAGTCCAAGCCCGCAATTACATTTAAATGAGACAGCTTACTCATTGGGCTTATACAGTAGTGATGATGCAGATTATTTTTCACCCAGTCTCCAAGAAGATGTGTTCCAGCAGGTACAGTCAGTGCAAGATTCAATGCTACTTCAGGGTGTTGATCCAGCGCAACTTGCCGAATCAATACAGGCTGCAGCATTGCAAGATATAGCATCACTAGAAGATTATCAAAATTCTCCAAGCAGTCAACAGTTCCAGCATCATCAGGATTTACAATCTGTTTTAAATTCACCACTTCCAGTCAGCTTAGCTGACTTTGCCTATTCGCACAATCAAAGTGTCAGTTCACAAAAAGACAATGGATTCCAAACAAATGATACGAAAGACTTTGTCAGTTATGCTCAATCACCTCTACCTTCCCCAAGTTTTACTTATCCAACACCTCCTGCTAGCCAAGAAGGACAATCACCTTCTTTCGGGCCACTCCAGTCAGTTATCTCGCAAGGACCTGTGTCATCTCCTCTTTCTGCAGCATTTTACACGTCTACAATGTCCAGTTCTGCAGCGGTAGAAGCAGCATTAAATGAAGTTCTTCCATTGGATACGCATCAGAATGTTTATCCATCACCTCCACCACAATCTCCTTTATCTGCAACTCCTGTTCCTTCACCGCTTTCTTTACCAGCATCTTCATCATCCCCACTTCCCCATAATACTCTTCAATCACAAATGATGCCTAATTCTGACGATCCTTTGCTCTCTAGTAGTCCTAAAGACTTTGCATCAAGAAAACGATTTGATTTCCAtacatttaaagttttaaataatggAACACTTGATCTCGGGTCTAGTAGTCCTCAAGGATTGACAGGAATAGTTTTAGATCGAAATGGTGAATTAAAATTGATACAAACATCATGTAGTTTTCAACCGATGAAAACTACTAATTTAATGAACGGTACGACTGCAGTGTTTGTGAATACGAGGCCTAAAACAGAAACTGTTAATGTTAATGTGAATCCTGATTGTAGTGGTAAAGTGATGAAAAATATGTTACCTGGTAAAACTATGACAACTAACCGTACAACGCAAGTCCAGAAAACAACCAACTCGACGACAATGACTACAATGAAAGTCCTTGATCACATTAAGGAGGAAATTTTAGATGATGATGTCTTCCTTAGCCCTACAAGTATACCTGCAAGTCCAGTTAGATATTCAAGAAAAAGGCCAAGATTGGACCCTTCACAAACATCGCATTCCCCATATCCATCAAGATTAAGATCAACAAGGCATACCTCTTCACCTCTGCCATACACACCACCACCTGTCCTACCGCCTACTAGAAATGGACAGGGCCTTTATTGGCAAGCTATCACAACATGGCCTAGCTCAACAACACTTAAAGGTGATTTATCAAGTGGTGAGGAACTGGCACCTGAAAGTGATGCAGTTCCGCATATTAATGTAGGAAGTCATCACCAAGCTACAATACCACAATGGCTAGGAGACCAGAGAAAACCTGAAAGAGAACCATCTTATGAACATCTTTTGTGGGATCCTGGCATAAGCAAACTCGCTTCTGATAATGAAGTTGAAATGTACCTGGAGTTTGCTTGCTGTGCTGCAGTTCCCGGTGGAGGTCGCAATAAAGAATATGCATTACATTTACTGCATCTCTCCAATGGAAACATTCATGAAGCAATGTTGAAGTTGATGCAACCTACGCCAAGTTTACCTGCAGGCCATCCTCTGTTATCTTTTGAATACACAGATAGTGATAGATGGAGTGCTGATGAAATGGACGCATTCCATCAAGGACTACTGAAGTATGATAAGGATTTCACATGCATTGCACAAGAGGTTGGATCAAAGACAGTGAAACAATGTGTTCAGTTTTACTACTTATGGAAGAAAATCTGCGCAGAAGATTATAAAAGATTACGTTTAAGTAGGCGTAGAAATAAAGAAGctgattatgattatgattacATCAAAACCGACATTCCTGCCAATGATGTGGAGATGGTATCAACAAGCTCGGAAAGCCGGCTGTTTGTATGCGAATATCCGGACTGTTCTGCTAGTTTCAACTCAAGAGCGGCGTTAAATGGTCATATTCGAATCCATGGTGGTGGAGCGTGTGGAAGATGTCCGACCCCAGACAAGCGACAGTCCAGTGGATCAAGTCATTCGGAACCTGTTGAAGAATTTCCTTGCAAGATTTGTGGGAAaGTCTTCAACAAGGTGAAAAGTCGGAGTGCCCATATGAAGTCACATCGACCACCAGATGCGGAACCAAAAAAACCAAAGCTTGATCCACATAAATTGGAAATGGCAGAGCAGACTGTAGGCAGAGCAATGGGAGTTTCTTCTTCTATGTCCGTTCAACGCCATTTATAG
- Protein Sequence
- MQLIMQSTVCEHQINIVKPMAAAYGTLSKPVATAVAIATTVAPTPAPVTTASTVTVAAPTPKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDSDSKKCEKKETTGPPLQTASMSVRALIEEKIIQKRITNPSLAAHTQTNLTYSTAEPSRVTAPPQYPGTPPSSEPELNIKISSFVVPAAPTIANNDKNASRRHSDSEHFVPPRIPQNEAVPNNEKKITTTAAMTTTTSTSKVAIASMVKRSSSDPGTQPQSPSPSPQLHLNETAYSLGLYSSDDADYFSPSLQEDVFQQVQSVQDSMLLQGVDPAQLAESIQAAALQDIASLEDYQNSPSSQQFQHHQDLQSVLNSPLPVSLADFAYSHNQSVSSQKDNGFQTNDTKDFVSYAQSPLPSPSFTYPTPPASQEGQSPSFGPLQSVISQGPVSSPLSAAFYTSTMSSSAAVEAALNEVLPLDTHQNVYPSPPPQSPLSATPVPSPLSLPASSSSPLPHNTLQSQMMPNSDDPLLSSSPKDFASRKRFDFHTFKVLNNGTLDLGSSSPQGLTGIVLDRNGELKLIQTSCSFQPMKTTNLMNGTTAVFVNTRPKTETVNVNVNPDCSGKVMKNMLPGKTMTTNRTTQVQKTTNSTTMTTMKVLDHIKEEILDDDVFLSPTSIPASPVRYSRKRPRLDPSQTSHSPYPSRLRSTRHTSSPLPYTPPPVLPPTRNGQGLYWQAITTWPSSTTLKGDLSSGEELAPESDAVPHINVGSHHQATIPQWLGDQRKPEREPSYEHLLWDPGISKLASDNEVEMYLEFACCAAVPGGGRNKEYALHLLHLSNGNIHEAMLKLMQPTPSLPAGHPLLSFEYTDSDRWSADEMDAFHQGLLKYDKDFTCIAQEVGSKTVKQCVQFYYLWKKICAEDYKRLRLSRRRNKEADYDYDYIKTDIPANDVEMVSTSSESRLFVCEYPDCSASFNSRAALNGHIRIHGGGACGRCPTPDKRQSSGSSHSEPVEEFPCKICGKVFNKVKSRSAHMKSHRPPDAEPKKPKLDPHKLEMAEQTVGRAMGVSSSMSVQRHL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00857575;
- 90% Identity
- iTF_00284098;
- 80% Identity
- iTF_00284098;