Basic Information

Insect: Lampropteryx suffumata
Gene Symbol: -
Assembly: GCA_948098915.1
Location: OX402569.1:1416438-1420181[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 9.4e-06 0.00081 20.6 5.4 1 23 342 365 342 365 0.97

2 17 0.00014 0.012 17.0 3.0 1 23 371 394 371 394 0.97

3 17 1e-05 0.0009 20.5 4.0 1 23 400 423 400 423 0.96

4 17 0.00019 0.017 16.5 3.6 1 23 440 462 440 462 0.98

5 17 4.4e-08 3.8e-06 28.0 0.2 1 23 468 490 468 490 0.98

6 17 0.0011 0.093 14.1 1.8 1 23 496 519 496 519 0.96

7 17 0.00012 0.011 17.1 1.5 1 23 525 548 525 548 0.98

8 17 1.4e-06 0.00012 23.2 0.1 3 23 556 576 554 576 0.97

9 17 0.0079 0.68 11.4 3.4 6 23 586 603 584 603 0.96

10 17 0.027 2.3 9.7 6.3 1 23 608 630 608 630 0.96

11 17 0.08 6.9 8.2 0.3 3 23 638 658 637 658 0.96

12 17 5.6e-07 4.8e-05 24.5 0.5 1 23 664 686 664 686 0.99

13 17 4.5e-07 3.8e-05 24.8 0.8 1 23 692 714 692 714 0.98

14 17 0.00035 0.03 15.7 1.3 1 23 720 742 720 742 0.98

15 17 8.8e-07 7.6e-05 23.8 3.9 1 23 748 770 748 770 0.97

16 17 4.8e-05 0.0041 18.4 0.3 2 23 777 798 776 798 0.95

17 17 2.2e-05 0.0019 19.4 2.0 1 23 804 826 804 826 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	9.4e-06	0.00081	20.6	5.4	1	23	342	365	342	365	0.97
2	17	0.00014	0.012	17.0	3.0	1	23	371	394	371	394	0.97
3	17	1e-05	0.0009	20.5	4.0	1	23	400	423	400	423	0.96
4	17	0.00019	0.017	16.5	3.6	1	23	440	462	440	462	0.98
5	17	4.4e-08	3.8e-06	28.0	0.2	1	23	468	490	468	490	0.98
6	17	0.0011	0.093	14.1	1.8	1	23	496	519	496	519	0.96
7	17	0.00012	0.011	17.1	1.5	1	23	525	548	525	548	0.98
8	17	1.4e-06	0.00012	23.2	0.1	3	23	556	576	554	576	0.97
9	17	0.0079	0.68	11.4	3.4	6	23	586	603	584	603	0.96
10	17	0.027	2.3	9.7	6.3	1	23	608	630	608	630	0.96
11	17	0.08	6.9	8.2	0.3	3	23	638	658	637	658	0.96
12	17	5.6e-07	4.8e-05	24.5	0.5	1	23	664	686	664	686	0.99
13	17	4.5e-07	3.8e-05	24.8	0.8	1	23	692	714	692	714	0.98
14	17	0.00035	0.03	15.7	1.3	1	23	720	742	720	742	0.98
15	17	8.8e-07	7.6e-05	23.8	3.9	1	23	748	770	748	770	0.97
16	17	4.8e-05	0.0041	18.4	0.3	2	23	777	798	776	798	0.95
17	17	2.2e-05	0.0019	19.4	2.0	1	23	804	826	804	826	0.98

Sequence Information

Coding Sequence: ATGAAGACACATGTCGTCAGCAAAGAAGACGAAGAGAAGTTAGGGAAGGAGAAGGAGAAAAGTCTATCCTCTGTTGGGAAAATGGAAATAATTGCTGCCAAAAAATGCCCAATGATGTTAAGAACAAACCGTAACTTGTCTGAGACTTCTGCACTCTGCATATCTGAACATAATTATTCTAGCAACACAAACCCTCCAGCCGCTGAGGAGACAGAACTGGAATTTGTAATAGAAAAACTTGAAGATGATTTGTTTGACATGGAGGATTTAGAACACCAAAACATATCAACAATTCATAATACACAGGCTGTTCAACATTCAAGCAATGTAAGCATATCAGGGATTGATGATGATGAAGGTGATACAAAAGATAGACAAGAAATTGAAGAGTTTTATATACAAGAAGATGAATGGTTTCAAACTGCAGAAACAACACAAGATGTTGAGACTAAGGCTAACTTGAATAAAACGAAGCGTTCATCGGGAAGGGGTGATAAGACTCGTAACACAGCTGAGCGTCATAAGCAGACCCACGCTAATCACCCGTCTGATGAAACATTTGTAGAGGATAATGGGAATAGTGGGTCTCGCGATATGTCTATACAATTAAGTGGTAACATGAGTAAAAAAAGCTGTGCATCAAAATATTACTATATGAGACATAGTGTGCATGACGTGTCTGATAATAATGATTTCTGCAACTCTAGCGCTCCGGAGCCTAACAAGATAGAACAAGTCATTGTGAAAGAGGATATTAAGGAGGAAAATGAGGAGACAAAACCACTTAATTTGACATCTGTTACTACAAAAGCCACGTCTTTAAATTACTGTTCCAACTATGAAACACAAGAGACTGTGAAGGTAGAAGTAGTTATAAAAGATGAGCCGGTTATTAAATTTGAAGATGACTCCTTTGAATCTGAAGAGACAATACTTTGTAGAAATGAGATAAGTGCTAGCTTGAAAGCGAAGGAGGCGTCAGGGACGAGTGAGACATACGACATGGCTGTGCTAAGTGCGCAGTTCCATTGTGATATATGTGAGAAAAACTTTACCACAAATCACTACCTCAAGAAACATATGAATATGATTCATGATGGACAAAAGCCATTCTCCTGCAATAATTGCAACAAGAGATTCTCTTTTATACATCTATTAAATAACCACATGATACGTGTTCATTCTGACGAAAAACCACATGCTTGCAACTTCTGTGATAAAGCCTTTAAACAGTCATGGCATTTAATGATGCACATGCGAATGCGGCATCCAGAAAATGTAACTAAAAGAAAGACGAAAAGAAAACCGAAGCACACACACACATGCAATTTATGTTTAAAGTCATACTCTAAGAAAAGCAGTTTAATAGTCCACAAGAGAATGCACTCTGAAAAAAGACCTTATGATTGCAATATATGTGATAAATCATTTAGTCAATATGCAGCTCTGAAAGCCCACATGAGAATACACTCCGCAGAAAAGTTGTACAATTGTAACAAATGTAACATGGCATTTCGTTTTCGAATTAGTTTGTGGCGTCACAATAAGCGAGAGCATAATGTAGAGAAATTATACACCTGCAAGATATGTGTAAAAGAGTTTTATGGCATGAATAACTTGAAGGATCACATGAAAACAAAGCACAGTTTTGCGAAAATAGATGCCTGCGAAATTTGTGATAAAGCATATGATAATAAAGGAAGTTTGATAAAACATATGAAAACACACTCAGGCAAATTGGCATATGCTTGCTTTTGTAGTGAAACATTTAGATTGAAATCTCATTTAATTAAGCACTTGAGAATACATTTTGGAAATCCACACTCTTGCACTCTATGTGACAAGAGATACGCTTTTAAACGATCATTAGACAAGCACATGTTCCATCACACTAGAGAGAAACCACACGGTTGCACCGTATGTGGTAAGGCATTTAATGCATTACCGAGATTAAAGTTCCACATGCGACAACACAGTACAGATAAACCATACTCTTGTGAATTGTGCGACAAGGTATTTTATAGTGAAGTCAATTTGAAGACCCACATACGAATGCATATAGAGGAGAGGCTATACATCTGCGATATTTGCAAGAAAACATATAATAGAAAAGATCTTTTGAAAGCCCACATACAAACGCACGCTGGAATGAAGCCATACACTTGCAATATATGTGGGAAGGGATTCGCTAAAATAAAGTGTATGAAAGCCCACAGGCTTATACATACAGACCAAAAGCAACACATTTGCAAATTATGTGGAAAGAGATTTAGAGTAAAATCTTATTTGAAGTTGCACATGCGGACACACAACCGAGTTAAGACTCTTACCTGCGGGATATGTAATACTGCATACTATGACAAGAGGAATCTAGAAAGGCACATGCTTGATCACTCCGGAGACAAACCATACTCTTGCGATATCTGTTACAAGGAATTTAAAGAAAAATCTGAATTAATCAGCCACCATCGAATTCACATCCTCACTAGGCAAAATACAATTGGCACAATTGGCATCTCGAAACCAACTTGTGAGTCAACCAATGCGAATAAACATTTGCTTGACCATAACTATTATCAGGTAAATTCGTAG
Protein Sequence: MKTHVVSKEDEEKLGKEKEKSLSSVGKMEIIAAKKCPMMLRTNRNLSETSALCISEHNYSSNTNPPAAEETELEFVIEKLEDDLFDMEDLEHQNISTIHNTQAVQHSSNVSISGIDDDEGDTKDRQEIEEFYIQEDEWFQTAETTQDVETKANLNKTKRSSGRGDKTRNTAERHKQTHANHPSDETFVEDNGNSGSRDMSIQLSGNMSKKSCASKYYYMRHSVHDVSDNNDFCNSSAPEPNKIEQVIVKEDIKEENEETKPLNLTSVTTKATSLNYCSNYETQETVKVEVVIKDEPVIKFEDDSFESEETILCRNEISASLKAKEASGTSETYDMAVLSAQFHCDICEKNFTTNHYLKKHMNMIHDGQKPFSCNNCNKRFSFIHLLNNHMIRVHSDEKPHACNFCDKAFKQSWHLMMHMRMRHPENVTKRKTKRKPKHTHTCNLCLKSYSKKSSLIVHKRMHSEKRPYDCNICDKSFSQYAALKAHMRIHSAEKLYNCNKCNMAFRFRISLWRHNKREHNVEKLYTCKICVKEFYGMNNLKDHMKTKHSFAKIDACEICDKAYDNKGSLIKHMKTHSGKLAYACFCSETFRLKSHLIKHLRIHFGNPHSCTLCDKRYAFKRSLDKHMFHHTREKPHGCTVCGKAFNALPRLKFHMRQHSTDKPYSCELCDKVFYSEVNLKTHIRMHIEERLYICDICKKTYNRKDLLKAHIQTHAGMKPYTCNICGKGFAKIKCMKAHRLIHTDQKQHICKLCGKRFRVKSYLKLHMRTHNRVKTLTCGICNTAYYDKRNLERHMLDHSGDKPYSCDICYKEFKEKSELISHHRIHILTRQNTIGTIGISKPTCESTNANKHLLDHNYYQVNS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00856877;
90% Identity: iTF_00856877;
80% Identity: -