Lsuf003238.2
Basic Information
- Insect
- Lampropteryx suffumata
- Gene Symbol
- PAXBP1
- Assembly
- GCA_948098915.1
- Location
- OX402545.1:18913867-18932136[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.00038 4.3 7.8 0.0 2 40 531 569 530 574 0.91 2 3 0.00038 4.3 7.8 0.0 2 40 625 663 624 668 0.91 3 3 7.4e-14 8.4e-10 39.6 0.2 2 190 746 913 745 920 0.72
Sequence Information
- Coding Sequence
- ATGTTTCGCAAGCCTAAGAAGATCCAGAGGCGTGTGTTCTGTGCTGATGACGATGACGATGGTGACCCAGAACCACCGCCGCCGCCTATCATCAGTCAGGAGTCCTTGGAGAAGAAAGAAAAAAGAGATAAGAAAGAGAATAAGCCTGTGAAGAGTGTGGCACTTCTTAGCTTTGCAGACGAAGAGGAGGAGTGTGAGGAATTTAAAGTGAAGAAATCATCCCAGAGCAAGCGCCTGTCCAAGCGCAGAGATAAGGAAAGAAAGCGATTGCCCGATGGTGATAGTAACAAATATGACAGTAATGGCTACGAGGAAAACTCAAACTACACAGAAAAGGAAATCAACACCATCAAACCCAAGAAGAAAGTAACTCTAGAAGGTCTTATTCTGTCTGGACGAGAGGCACTAGCAGCAGATGGGGCAGGGGATTTATCAGAAGAAGATGAGGTGGAGGGGGAGGAAGACGATAGGGGGTTCCACCGGTACCGTGCGGAATCAGTCAGGGCTGCGCTGGCCACCGCCTCGGGGCACATTCCCGACGCAGCGCTCATCCACGCCGCGCGCAAGACCAGACAGCAGGCGCGCGAACTGGGAGATTTCGTGCCGATCCAGTCGGAGCCGATGTCGGCCGGCTCGCGGCTCGTGCGCGAGGGAGACGACTCCGGCGATGATGAGGAGGATCGTATACAAGTGAGGGGGCTGGACATGCCCAGCGACAAACCCCAGCGTGGCACCGCAGCTATTGATCCTGACGAAGAAAACAACAGCGAGGTTGAGGAGTGGGAGGAGCAACAGATAAAGAAAGCTATGCCCGCTATTGTTGACTTAACTGGTGAGTGCGGGCTGGAGTTGAACCCGTTTGCGGTGGCCCCTCCCCCCCCTCCCCCTCCCCCTCCCCCTCCCGCCCCGCGCATGCCCTCCGCGCCGCACCTGCGCCCGCTGGCCGCGCCCGGCGCATGCGCCTCCGCGCAACAACTCGTCTCTGCACTCACCCAGAGGTTGGAAGAACTAGAACTGGATAGGATCAACACGTCAATAAAGCGCGAAGAAGTGCAGTGTCAGCTGTTAGAGGCGGCGCGGATCCGCGAGAGTCGGGCTGCACGTCGCGCCGAGCTCGACGCCGCGTACCGCCGGGCGCAGGCCTCGCGCGGGTACCTCACCGACCTCATTGAGTGTCTCGACGAGAAGATGCCGCAATTAGAGGCATTAGAGGCGCGCGCGTTATTACTGCAGCGACGTCGGCGCGACTTCCTCGTGGAGCGGCGCCGCGCCGACCTCCGGGACCAGGCGCAAGACGTGCTCGCACTAGCCGCGCGTCCGGGTTCGGTCCGTCAGCCTGACGGGCCGGATAAGGTGTGTCGTACTGCGGAGCGGGAGGGGAGGCGGCGCGCGCGGCGGCTGAAGCGCGAGGGGGGGGCGGCCGCGGGGGTGGGGGGTGCGGGGGGAGCTGCCCGCGCGCACCGCGACGGAGACTCCAGCGACGACGACCTGCCACCCGCGGAACACCATCACGCTATCACAGAACGAGAGAGTATCCGCGTGTCAGCGGGCGCGCTGTTCGCTGACGTGCAGGAGGCGTGGCGCGGCGTGCGCGGGGTGAGCGCGCGCCTGGCCGCCTGGCGCCGCCGCGCCGCGCCCGCCTACAGCGACGCGCACGTACCCGCCGCGCTGCCCAAGCTGCTGGCGCCCTACGTGCGGCACCAGGTATGTACTGCACGTGCGCGGGGTGAGCGCGCGCCTGGCCGCCTGGCGCCGCCGCGCCGCGCCCGCCTACAGCGACGCGCACGTACCCGCCGCGCTGCCCAAGCTGCTGGCGCCCTACGTGCGGCACCAGGTATGTACTGCACGTGCGCGGGGTATGTACTGCACGTGCGCGGGGTGAGCGCGCGCCTGGCCGCCTGGCGCCGCCGCGCCGCGCCCGCCTACAGCGACGCGCACGTACCCGCCGCGCTGCCCAAGCTGCTGGCGCCCTACGTGCGGCACCAGGTATGTACTGCACGTGCGCGGGGTGAGCGCGCGCCTGGCCGCCTGGCGCCGCCGCGCCGCGCCCGCCTACAGCGACGCGCACGTACCCGCCGCGCTGCCCAAGCTGCTGGCGCCCTACGTGCGGCACCAGCGCGCGCCTGGCCGCCTGGCGCCGCCGCGCCGCGCCCGCCTACAGCGACGCGCACGTACCCGCCGCGCTGCCCAAGCTGCTGGCGCCCTACGTGCGGCACCAGGTATGTACTGCACGTGCGCGGGGTGAGCGCGCGCCTGGCCGCCTGGCGCCGCCGCGCCGCGCCCGCCTACAGCGACGCGCACGTACCCGCCGCGCTGCCCAAGCTGCTGGCGCCCTACGTGCGGCACCAGCTAATTCTGTGGAATCCTCTGGCCGACGAAGACAACGAGGACTATGAGAAAATGGATTGGTACAAATGTCTGATGATGTACGGCGCCCGTCCTGCTGGGACCGCGGATTCGTCGGAGTCTGACGGCGAGGCCGAGCCGGCGCCGGTGCCGCTGTCGGAACACTCCGTGAGAGACGATCCCGACCTGATGCTGGTACCGACGATGTTGAATAAGGTTGTACTGCCTAAGATTACAGAACAAATCTCCCAGGCGTGGGACCCGATGTGCGTGCGCGCATGCGTGCGGCTACGTCACGTGATGGTGCGCGCGGCCCACGTGCCGGGCTGCACGGCCGCCCTGCGCCGTCTGGCCGCCGCCGTCGCCGCGCAGCTGGCCGTCGCACTGCACAGTGACGTCTTCCTGCCCGCACTGCCGCCTGTGTGA
- Protein Sequence
- MFRKPKKIQRRVFCADDDDDGDPEPPPPPIISQESLEKKEKRDKKENKPVKSVALLSFADEEEECEEFKVKKSSQSKRLSKRRDKERKRLPDGDSNKYDSNGYEENSNYTEKEINTIKPKKKVTLEGLILSGREALAADGAGDLSEEDEVEGEEDDRGFHRYRAESVRAALATASGHIPDAALIHAARKTRQQARELGDFVPIQSEPMSAGSRLVREGDDSGDDEEDRIQVRGLDMPSDKPQRGTAAIDPDEENNSEVEEWEEQQIKKAMPAIVDLTGECGLELNPFAVAPPPPPPPPPPPAPRMPSAPHLRPLAAPGACASAQQLVSALTQRLEELELDRINTSIKREEVQCQLLEAARIRESRAARRAELDAAYRRAQASRGYLTDLIECLDEKMPQLEALEARALLLQRRRRDFLVERRRADLRDQAQDVLALAARPGSVRQPDGPDKVCRTAEREGRRRARRLKREGGAAAGVGGAGGAARAHRDGDSSDDDLPPAEHHHAITERESIRVSAGALFADVQEAWRGVRGVSARLAAWRRRAAPAYSDAHVPAALPKLLAPYVRHQVCTARARGERAPGRLAPPRRARLQRRARTRRAAQAAGALRAAPGMYCTCAGYVLHVRGVSARLAAWRRRAAPAYSDAHVPAALPKLLAPYVRHQVCTARARGERAPGRLAPPRRARLQRRARTRRAAQAAGALRAAPARAWPPGAAAPRPPTATRTYPPRCPSCWRPTCGTRYVLHVRGVSARLAAWRRRAAPAYSDAHVPAALPKLLAPYVRHQLILWNPLADEDNEDYEKMDWYKCLMMYGARPAGTADSSESDGEAEPAPVPLSEHSVRDDPDLMLVPTMLNKVVLPKITEQISQAWDPMCVRACVRLRHVMVRAAHVPGCTAALRRLAAAVAAQLAVALHSDVFLPALPPV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -