Lsuf018718.1
Basic Information
- Insect
- Lampropteryx suffumata
- Gene Symbol
- -
- Assembly
- GCA_948098915.1
- Location
- OX402567.1:7559973-7560865[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.4e-13 4.6e-10 39.9 0.1 1 39 9 47 9 53 0.92 2 2 9.6 4.7e+03 -1.7 0.0 16 23 123 130 120 130 0.80
Sequence Information
- Coding Sequence
- atgcctcccaaacgggcattgtggtcagaagacgatctgatcgcagctgttagagccgtacaaagaggaactttgagtacgtataaggctgcagagagatataaggttcctagaagaacaatcagaaatcatctgcagtctggcagtttaaagaaaagattgggtcgtaaacctatattaaatgatgaagaggaagcTCAACTTGTGCAAAGGATAATCCGGTATTCTGAAATGGTCTTGCCTGTGACAAGAATATTGCGTTTGGTGTATAAATATTGTGAGCAAAATAATATAAAACACAATTTTAATGATGAGGGCAAACGCGCAGGCAAAGACTGGTTCAAAGCGTTCATGAAAAGACATAATGAAATATCCGTAAGAAAAGCGCAATTCATGAACCCAGCTAAAGCCCAAAGGCTAAATAAATTTATTGTTGATGACCATTTTAAAAAACTGAGAGATATCTACGATAAATTTGACGTATATGATCATCCCGAGAAAATTGATAATGTGGGTGAGAAAGGATGCCGTCTCACTATCCACCACCAGCAAAGTGTTTTGGCCAAAAAAGGGGCTAAAAGGGTTCATTTGCAGTTTTCTGAACATGCTGAAAGCGTTACCATCGTAGGGTGTGTTAATGTTCTTGGCACAGCCATACCACCTATGGTCATATTTAAGGGAAAACGTTTGAAACCAGAATTGTACGATAATTTGCCTCAAGGATCTTTAGTAGAAAAATCAGCAAAGGGTCGATATATCCGATTCACTTGGCATTAA
- Protein Sequence
- MPPKRALWSEDDLIAAVRAVQRGTLSTYKAAERYKVPRRTIRNHLQSGSLKKRLGRKPILNDEEEAQLVQRIIRYSEMVLPVTRILRLVYKYCEQNNIKHNFNDEGKRAGKDWFKAFMKRHNEISVRKAQFMNPAKAQRLNKFIVDDHFKKLRDIYDKFDVYDHPEKIDNVGEKGCRLTIHHQQSVLAKKGAKRVHLQFSEHAESVTIVGCVNVLGTAIPPMVIFKGKRLKPELYDNLPQGSLVEKSAKGRYIRFTWH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00415841; iTF_00416024; iTF_00415870; iTF_00415871; iTF_00049832; iTF_00049831; iTF_00856537;
- 90% Identity
- iTF_00049832;
- 80% Identity
- -