Aoxy003150.1
Basic Information
- Insect
- Allophyes oxyacanthae
- Gene Symbol
- -
- Assembly
- GCA_932294395.1
- Location
- CAKOAO010000038.1:115-888[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.6e-12 3.2e-09 36.8 0.1 2 39 10 47 9 53 0.91 2 2 5.3 4.7e+03 -2.2 0.0 17 23 126 132 124 132 0.84
Sequence Information
- Coding Sequence
- ATGCCTCCCAAACGGGCATTGTGGTCAGAAAACGATCTGATCGCAGCTGTTAGAGCAGTACAAAGAGGAACTTTGAGTACGTATAAGGCTGCAGAGAGATATAAGGTTCCAAGAAGAACAATCAGAAATCATCTGCAGTCTGGCAGTTTAAAGAAAAGATTGGGACGTAAACCTATATTAAATGATGAAGAGGAAGCTCAACTTGTGCAAAGGATAATCCGGTATTCTGAAATGGGCTTGCCTGTGACACCAAGAATATTGCGTCGATTGGTGTATAAATATTGTgagcaaaataatataaaacacaattttaatgATGAGGGCAAACGCGCAGGCAAAGACTGGTTCAAAGCGTTCATGAAAAGACACCATGAAATATCAATAAGAAAAGCGCAATTCATGAACCCAGCTAGAGCCCAAAAGCTAAATAAATTTATCGTTGATGACCATTTTAAAAAACTGAGAGATATCTACGATAAATTTGACTTATATGATCATCCcgagaaaatttataatatggaTGAGAAAGGATGCCGTCTCACTATCCACCACCAGCAAAGTGTTTTGGCCAAAAAAGGGGCTAAAAGGGTTCATTTGCAGTCTTCTGAACATGCTGAAAGCGTTACCATCGCAGGATGTGTAAATGCTCTTGGCACAGCCATACCACctatggtcatatttaagggaaaACGTTTGAAACCAGAATTGTACGATAATTTGCCTCAAGGCTCTTTAGTAGAAAAATCAGCAAAGGATATGATGAATGACCAATGA
- Protein Sequence
- MPPKRALWSENDLIAAVRAVQRGTLSTYKAAERYKVPRRTIRNHLQSGSLKKRLGRKPILNDEEEAQLVQRIIRYSEMGLPVTPRILRRLVYKYCEQNNIKHNFNDEGKRAGKDWFKAFMKRHHEISIRKAQFMNPARAQKLNKFIVDDHFKKLRDIYDKFDLYDHPEKIYNMDEKGCRLTIHHQQSVLAKKGAKRVHLQSSEHAESVTIAGCVNALGTAIPPMVIFKGKRLKPELYDNLPQGSLVEKSAKDMMNDQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00856528;
- 90% Identity
- iTF_00049832;
- 80% Identity
- iTF_00049832;