Basic Information

Insect: Lamproptera curius
Gene Symbol: -
Assembly: GCA_029286875.1
Location: JAGSMT010000031.1:1766873-1785901[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 6.4e-05 0.01 17.5 2.2 1 23 429 451 429 451 0.97

2 19 0.0039 0.62 11.9 0.5 1 20 457 476 457 479 0.94

3 19 4.7e-05 0.0075 17.9 5.4 1 23 498 520 498 520 0.98

4 19 0.00015 0.024 16.3 4.7 1 23 526 548 526 548 0.99

5 19 3e-05 0.0047 18.5 5.3 1 23 554 576 554 576 0.97

6 19 9.1e-06 0.0014 20.1 7.3 1 23 582 604 582 604 0.97

7 19 7.7e-07 0.00012 23.5 2.7 1 23 610 632 610 632 0.97

8 19 8.1e-05 0.013 17.2 6.7 1 23 638 660 638 660 0.97

9 19 0.17 27 6.7 0.5 10 23 682 695 681 695 0.95

10 19 3.7e-05 0.0059 18.2 7.7 1 23 701 723 701 723 0.98

11 19 6.3e-06 0.001 20.6 6.6 1 23 729 751 729 751 0.98

12 19 3.3e-05 0.0053 18.4 4.4 1 23 757 779 757 779 0.98

13 19 8.6e-06 0.0014 20.2 6.4 1 23 785 807 785 807 0.97

14 19 2.3e-05 0.0036 18.9 6.3 1 23 813 835 813 835 0.97

15 19 1.3e-05 0.002 19.7 5.7 1 23 841 863 841 863 0.98

16 19 1.1e-05 0.0017 19.9 6.3 1 23 869 891 869 891 0.97

17 19 3.1e-06 0.00048 21.6 3.2 1 23 897 919 897 919 0.96

18 19 0.00058 0.092 14.5 0.3 1 23 926 948 926 948 0.96

19 19 0.0035 0.55 12.0 4.5 1 23 958 980 958 980 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	6.4e-05	0.01	17.5	2.2	1	23	429	451	429	451	0.97
2	19	0.0039	0.62	11.9	0.5	1	20	457	476	457	479	0.94
3	19	4.7e-05	0.0075	17.9	5.4	1	23	498	520	498	520	0.98
4	19	0.00015	0.024	16.3	4.7	1	23	526	548	526	548	0.99
5	19	3e-05	0.0047	18.5	5.3	1	23	554	576	554	576	0.97
6	19	9.1e-06	0.0014	20.1	7.3	1	23	582	604	582	604	0.97
7	19	7.7e-07	0.00012	23.5	2.7	1	23	610	632	610	632	0.97
8	19	8.1e-05	0.013	17.2	6.7	1	23	638	660	638	660	0.97
9	19	0.17	27	6.7	0.5	10	23	682	695	681	695	0.95
10	19	3.7e-05	0.0059	18.2	7.7	1	23	701	723	701	723	0.98
11	19	6.3e-06	0.001	20.6	6.6	1	23	729	751	729	751	0.98
12	19	3.3e-05	0.0053	18.4	4.4	1	23	757	779	757	779	0.98
13	19	8.6e-06	0.0014	20.2	6.4	1	23	785	807	785	807	0.97
14	19	2.3e-05	0.0036	18.9	6.3	1	23	813	835	813	835	0.97
15	19	1.3e-05	0.002	19.7	5.7	1	23	841	863	841	863	0.98
16	19	1.1e-05	0.0017	19.9	6.3	1	23	869	891	869	891	0.97
17	19	3.1e-06	0.00048	21.6	3.2	1	23	897	919	897	919	0.96
18	19	0.00058	0.092	14.5	0.3	1	23	926	948	926	948	0.96
19	19	0.0035	0.55	12.0	4.5	1	23	958	980	958	980	0.99

Sequence Information

Coding Sequence: atgaatccGGAACACCATAACATAAATACGGGTGGAGGCCAACCGCCTGGTAACTCGGAGACACAAAATCAAAGAGTTACCGCTACCCAACAACAACAACAGCCAGCTAATAGTTTAACACCTACAACGTCTGCCACAGACCTCAGAGTTAATTCGGCAGCAGTAAACGTTGCTTTGTCAAGTGTCGCGAAATATTGGGTGTTCACGAATTTATTTCCCGGACCTATTCCACAAGTGTCTGTGTACGGATTGCCAACAAACACAAGGATAGAAAATGGAAAACCAGTGCAGgACTTAGGTCAAGCACATGCGGGCCTGTTAAATGGAGACCCTAATATCATACTGGGACAGCATACTGGACAATCACAGTTATCTGTTTCTGGCCCCAGTGGCCAACAGATTCCTGTCACTCAAATCATTGCAACTCAACTACAAGCTGCACAGGCACATGAATCAATGGTGACACACACACAAGAACTAGCCACACAAAGCTCTGGCAATGGTACACAGGTGTCTGTAAGCGCTGGGCAGTCCACTCATCAGCAGGTACCCAATAATCGGGTCGAGTTTATACAACACCATAACATTGATATGGTAAATCATGTGGGTCACCATAATCAACAACACTCAATGCAGCAGCAACTCATGACGACAACACGACAAGAGCATGCCAATCAACAgattCAGTTGACGGTCAGCGAAGACGGCATAGTGACAGTAGTGGAGCCTGGTGGCGGAAAACTTGTGGATAAAGAGGAACTGCATGAAGCGATAAAGATGCCAACCGACCACACTCTTACTGTACACCAATTACAACAACTTGTTGGACATCATCAGGTCATTGACAGTGTAGTCCGAATAGAGCAAGCGACAGGGGAACCTGCTAACATACTGGTTACACAAAATCCGGACGGCACCACGTCAATTGAAACTAGCGCATCTGAACAACTCATTGTTAAGGATGAAAAGAATGTTGCCAAAATAGAATCCGCCCAGTTTGCAATACCCACTGATATAAAGGATATCAAGGGAATTGATTTAAAGACTGTAGGTGCGATGGGAGTGGAAGGAGCAGTTGTTAAAATTTCCGCCGGCGCATCGGAACACGATCTCCATGCTATGTACAAAGTAAATGTAGAAGATCTTTCCCAGCTACTTGCATATCACGAGGTTTTCGGCAAATTGAACCCTGAGGGCCAACAACAGGCGAAGATCATCAGCGAAGTGGAGGTGGAAGCGGGTACTAGTGCCGCCATATCGGAAAGTGACTCCTCCCCTGGTCACCATTCTTGTGACATTTGTGGGAAGATATTTCAATTTCGTTATCAATTAATTGTTCACAGGCGATACCACGGCGAGAGTAAACCATACACGTGTCAAGTTTGCGGTTCGGCGTTCGCGAATGCCGTAGAACTGTCACGACACGGGAAATGTCATATGGCCGGAGAAACAGCGGAGAGAACGACGAAAAGATTAACTCAGGACAAACCGTACGCGTGCACTTCTTGCCACAAAACATTCTCACGAAAGGAGCATTTGGACAACCATGTGAGAAGTCACACAGGCGAAACTCCTTATAGGTGTCAGTTCTGCGCGAAGACGTTCACGCGCAAGGAGCACATGGTGAACCACGTGCGCAAGCACACGGGCGAGACGCCCCACCGCTGCGACATCTGCAAGAAGAGCTTCACGCGGAAGGAGCACTTCATGAACCACGTCATGTGGCACACGGGTGAAACGCCGCACCATTGTCAAATATGTGGCAAGAAGTACACTAGGAAGGAGCATTTAGTCAACCATATGAGATCTCATACGAACGACACGCCGTTTAGATGCGAATTGTGCGGCAAATCGTTCACGAGAAAGGAACACTACACGAATCACATACTGTGGCACACGGGTGAAACGCCCCACCGCTGCGACTTCTGCTCGAAGACCTTCACCCGCAAGGAGCATCTGCTGAACCACGTGCGACAGCACACGGGCGAGTCGCCCACCGCTGCACCTACTGCTCCAAGTCCTTCACGAGGCGGAGCACCTCCCTTTACCAGGAAGGACCATTTGGTGAACCACGTAAGACAGCACACGGGGGAGTCCCCGCACAAGTGTTCGTTCTGCTCGAAGTCCTTCACCAGGAAGGAGCATCTGACCAATCACGTGCGCCAACACACCGGGGAATCTCCTCACCGATGCACGTACTGCGCCAAGTCGTTCACGAGGAAGGAGCATCTCACGAACCATATCAGACAGCACACCGGCGAAACTCCGCACAAGTGCGCGTTCTGCCCGCGCGCCTTCACGCGCAAGGAGCACCTGAACAACCACGTGCGCCAGCACACGGGCGACGCGCCGCACTCTTGCACCTATTGCAACAAGACCTTCACTCGCAAGGAGCACCTCGTCAACCACGTGCGGCAACACACTGGGGAGACGCCGTTCAAGTGCACTTATTGCACCAAGGCCTTCTCGCGTAAGGAGCATCTCACCAACCACGTCCACCTGCATACGGGTGAGACCCCACACAGGTGCCCCTTCTGCACCAAGACTTACTCGAGGAAGGAGCATCTGACCAATCATGTCAGgATACACACGGGGGAATCGCCTCATCGGTGCGAGTTCTGCGACAAAACTTTCACCAGGAAGGAGCATCTGATCAACCATTTGAAACAGCACACTGGGGACACCCCGCACGCTTGCAAAGTCTGCTCGAAGCCCTTCACTAGGAAGGAACACCTTATTACCCATATGAGAGCGCACAATTGTGGCGAGCGTCCATTTAGTTGCGGGGAGTGTGGTAAATCGTTCCCGTTGAAAGGCAACCTGTTGTTCCACGAGCGGTCGCACCAAAAGGGCGGCGGGGGAAACAGGCCGTTCAGGTGCGACGTTTGCTCGAAGGACTTCATTTGTAAAGggCATCTAGTGTCACACCAGCGCACTCACGCATCGACAGGCGAGACTGCGACGAACAGTGAGCCAACAACGGAAGCGGAGCAATGCGGCGATTGCGACAAGGACACCACTGAAAGGGCGGAACGTAAACATGACGTTAGAGTGGCTACAGACAATCGGCCAGCAGAAGAGGATGTAACCCAAAACACCCAAAACACAGTAATGCAAATGAATAATCAGCAAGTTCGCACCGCGTCGAGTTCCGCCGCCGGCAGCGTGGCCACATTCACGCACAGCGCCCAACACAGCGCTGGCAACGCCATCTCGCACCACCCGGTCACTGTGAACTACTAG
Protein Sequence: MNPEHHNINTGGGQPPGNSETQNQRVTATQQQQQPANSLTPTTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTNTRIENGKPVQDLGQAHAGLLNGDPNIILGQHTGQSQLSVSGPSGQQIPVTQIIATQLQAAQAHESMVTHTQELATQSSGNGTQVSVSAGQSTHQQVPNNRVEFIQHHNIDMVNHVGHHNQQHSMQQQLMTTTRQEHANQQIQLTVSEDGIVTVVEPGGGKLVDKEELHEAIKMPTDHTLTVHQLQQLVGHHQVIDSVVRIEQATGEPANILVTQNPDGTTSIETSASEQLIVKDEKNVAKIESAQFAIPTDIKDIKGIDLKTVGAMGVEGAVVKISAGASEHDLHAMYKVNVEDLSQLLAYHEVFGKLNPEGQQQAKIISEVEVEAGTSAAISESDSSPGHHSCDICGKIFQFRYQLIVHRRYHGESKPYTCQVCGSAFANAVELSRHGKCHMAGETAERTTKRLTQDKPYACTSCHKTFSRKEHLDNHVRSHTGETPYRCQFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKEHLVNHMRSHTNDTPFRCELCGKSFTRKEHYTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPTAAPTAPSPSRGGAPPFTRKDHLVNHVRQHTGESPHKCSFCSKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLTNHIRQHTGETPHKCAFCPRAFTRKEHLNNHVRQHTGDAPHSCTYCNKTFTRKEHLVNHVRQHTGETPFKCTYCTKAFSRKEHLTNHVHLHTGETPHRCPFCTKTYSRKEHLTNHVRIHTGESPHRCEFCDKTFTRKEHLINHLKQHTGDTPHACKVCSKPFTRKEHLITHMRAHNCGERPFSCGECGKSFPLKGNLLFHERSHQKGGGGNRPFRCDVCSKDFICKGHLVSHQRTHASTGETATNSEPTTEAEQCGDCDKDTTERAERKHDVRVATDNRPAEEDVTQNTQNTVMQMNNQQVRTASSSAAGSVATFTHSAQHSAGNAISHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01157022;
90% Identity: -
80% Identity: -