Lcur001106.2
Basic Information
- Insect
- Lamproptera curius
- Gene Symbol
- lrrfip2
- Assembly
- GCA_029286875.1
- Location
- JAGSMT010000003.1:1731123-1746588[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.6e-70 9.9e-66 223.3 21.5 1 243 104 342 104 374 0.86 2 2 2 4.4e+04 -7.0 17.6 1 48 375 421 373 449 0.71
Sequence Information
- Coding Sequence
- ATGGGCAACAAGACGGAGGTGACGCCCGACAACAGTGAAGAGGAGAGCGGTGACGCCTTCACGGATGGCGACTTTGACGATTTCGACGACGGGCCTGTCGTCGAACGTGCTGTTAGTACGAAACCGGCGCAGCTGCCGGTCAACGAGGCCGTTAACTGTACTACCAATGGCGTAGTGGACGAAGGCCTCGAGCAGAATTCGACTCCGGACCAGACTGTGACCGATGACGATGCGACGGAGATCAGTCAAGACACGGACGACCAGATCAGCCCGTCCATTCTCGGCATTCTCGGCGACCAGCATACCCATGCGGAGCAGCGACTAGCCGCGCGCAGGGCCGCCCGCGCCGAGGCACGCGAGATCCGCATGCGAGAGCTGGAGAGGCAGCAGAGGGAACAGGAGGACCATGCGGACAAGGCGTTCGACATGTACACAGAGACGGTGGGACGCCGCGGGGGTCGGCTAGCCGCGCTCAGTCCATCCATCCACTCACCGAGACGGAGCTCCGAAGACTCTGTTGACGACGTATTCAGCATCAAAGACCTTAGGCATGAAATGAAAGAGGTGGAGGAGAAGTTCCGGAAGGCGATGATATTGAACGCGCAGCTGGACAACGACAAGGCGGCCCAGGGCTACCAGCTGGAACTGCTCAAGGACAGGATAGAGGAGCTGCAGGAGGAGCATGCGCAGCTGCAGCGCGAGCACAAAGAGAAGTGCTCTACCCACGAGCGGCTCAAACGGGAACACGCCACTTTGGAGAGGGAGGTGACGGCGGCGAGGGACGCGGTTAGGGCGCGGGAGGCGGCCGCTGATGCCGCGGGCTTCGTGTTCGTGGAGGCGGCTCCCGGCCAGGGTCTGGAGGCGGAGGAGGCGCCCAGGGCCCACGGCTCCGTGCCGCCATTGGCCCTGGTCTCGCACAGCTCCGAGAGGATGCTCAACGACGCCGGCGAAGGCACCCTGGACGTGCGGCTCCAACGGCTGATGAGCTCGAAGCAAGCGCTGGAGTCGGAGGCCGCCAGGCAGAACGGCGTCTCCTCGCATCTTGACCGCGACCACGAGGGCGAAGTGGAATCGCTGCGCAAATCGCTGGCGGAGGCGAAGGGGCGCAGCGCCCGGGCGGAGGCGGAGGCGGCGCTGCAGGCGGCGGCCGTGGCGCGGCTCGAGGCGCAGGTGGCCAGGCTGCGCGCGCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCAGGAGGCTGCAGAGAGAGGCACGAGAAGCCCTAAACCGAGTCGAAGAGTTGGAGACAGAGAACAACCACCTGACGAAGCGTCTGGACAAACTGAAGAACGCCAAGTCGGCACTGCTGAAGGAGCTGTGA
- Protein Sequence
- MGNKTEVTPDNSEEESGDAFTDGDFDDFDDGPVVERAVSTKPAQLPVNEAVNCTTNGVVDEGLEQNSTPDQTVTDDDATEISQDTDDQISPSILGILGDQHTHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAFDMYTETVGRRGGRLAALSPSIHSPRRSSEDSVDDVFSIKDLRHEMKEVEEKFRKAMILNAQLDNDKAAQGYQLELLKDRIEELQEEHAQLQREHKEKCSTHERLKREHATLEREVTAARDAVRAREAAADAAGFVFVEAAPGQGLEAEEAPRAHGSVPPLALVSHSSERMLNDAGEGTLDVRLQRLMSSKQALESEAARQNGVSSHLDRDHEGEVESLRKSLAEAKGRSARAEAEAALQAAAVARLEAQVARLRARQDHQDEHEEQLKQERRRLQREAREALNRVEELETENNHLTKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -