Lcur004916.1
Basic Information
- Insect
- Lamproptera curius
- Gene Symbol
- -
- Assembly
- GCA_029286875.1
- Location
- JAGSMT010000013.1:2706773-2707510[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.6e-07 0.00017 22.5 0.0 5 39 19 51 15 57 0.85
Sequence Information
- Coding Sequence
- atggttaacaaatataaaagaaaaactacaaaTGCATCATGGGACGAGAAAGTAATGAAACTTGCTATGGAAGAAACTAGTAAAGGATCAGTGAATGGTGCGGCTAAGAAGTATGGTATTAACTTATCTACGTTGCAGcgacatattaaaaaagtatgccCGAAGAAAAAACTCGGGAGGTACACAACTATATTTACGGACATTCAGGGACTCGAGCTTCTCGAATATGTGTTCCAAATGGATCATTTGTTTTTTGGACTTACGAAGAAAGAATTCTTAGAGCTCGTTCACCAATATGCTGAATCCAACAATATCCCACACCCATTCAAAAATGGAGCGGCAGGTGAAGATTTGTACAGTGGGTTTAAAACACGACATCCTGATATAACTCTACGCCATCCAGAACCAACGTCTTTAGCCCGCGCCAGAGGTTTTAACAAACCACAAGTACAAAGATTATTTGACCTGCTAGAAGGAGAGATCGACAAACATAAAATCGACGCGACGCGCATTTACAATGTCGACGAAACTGGTATTCAGACTAATAGCAACAAGCCGCCTAGAATTCTCAGTAGATCAGGAAAAAAACAGGTTGGTGTGATATCCAGTGTAGAGCGTGGCAAACTTACAACAGTGGTTTGCTGTTGCAACGCAGCAGGTGCATTTATACccccatttttaatttttgggagAAAGCGAATGGTGCCTAGGCTTCTAGATGGTGCTCCACCTGCATGA
- Protein Sequence
- MVNKYKRKTTNASWDEKVMKLAMEETSKGSVNGAAKKYGINLSTLQRHIKKVCPKKKLGRYTTIFTDIQGLELLEYVFQMDHLFFGLTKKEFLELVHQYAESNNIPHPFKNGAAGEDLYSGFKTRHPDITLRHPEPTSLARARGFNKPQVQRLFDLLEGEIDKHKIDATRIYNVDETGIQTNSNKPPRILSRSGKKQVGVISSVERGKLTTVVCCCNAAGAFIPPFLIFGRKRMVPRLLDGAPPA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00667402; iTF_00745624; iTF_01090681; iTF_00172846;
- 90% Identity
- -
- 80% Identity
- -