Lyun007490.1
Basic Information
- Insect
- Lamprigera yunnana
- Gene Symbol
- Rel
- Assembly
- GCA_013368075.1
- Location
- JABVZV010001235.1:365559-377403[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-34 8e-31 107.4 0.2 1 168 65 258 65 259 0.88 2 2 0.44 2.1e+03 -1.4 0.0 94 147 466 516 445 535 0.53
Sequence Information
- Coding Sequence
- atgtttccAATGGGAATGTTGACCAACCACATTCAATTGCAAACTAACGcaTTCAATATGAATTTGTATCCTAATACTTTGACTCCACCAATGGACTCACCGCCTACCGAGATGTCGAGTTCACCCATTTATTTGTATGACTCCTATGAAATTCCTACTGGTTACACTAATTCATTTGgCCCCCTTCCTTCGCTCAAAATTCTGGAGCAGCCAGTAGATAGGTTCAGATTTAGGTACAAATCTGAAATGTCGGGAACCCATGGTTCCTTGTGTGGTCTAACCTCTGACCGATCACGAAAACAAACCTATCCATGCGTGCAGTTACTTAATTATAATGAACCTGCCGTTATTCGTTGTTCTCTTTATCAGTATGGAAGAGAAAATACGGCTTATTCAAGACAATTGCATGCCCATCGATTGGTCAAGAAACAGGGCGCTGAAGAAATTGATGATCCACACGAAATAGTGGTAAATTCTGACTCTGGATATATTGCAAActttcACAGTATGGGAATTATACATACTGCAAAGAAATTCATAATTCCTGAACTAATCAGAAAAAACACACGGTTGAAAAAAGAAGAGATAGCGAGAGCAGATGGTGAACTTCGGCCATTAACTAAAAAAGAGGATATAGACATTAGAAGTTTGGCAGAAAAAGAAAGCAAatgcataaatttaaatgtggttTGCCTTCGTTTTGATGCATATAAAGTTTATAATAGTGTTTATTATCCTTTATGCGAACCTGTGTACACCCATGCTATTAATAACTTAaAAAGTGCTCTTACTggggatttaaaaattgttcgtaTGGATCACTGTTCGAGCTCATGTAGAGGTGGACGAgaagtatttattttagttgaaaaagttactaaaaaaaatattaaggTTCGCTTCTTTGAACTTGATGAAGAAGATCGTGAAATATGGAGTGATTACGGACGATTTAGTGATTTAGATGTGCACCATCAATTTGCCAttgtttttaaGACTCCGCCGTATAAAAATACTGACATTGACAAACAAGTAAGAGTCTATATTGAATTGCAAAGACCTTCAGATGGTGCTAGAAGTGAGGCCAAAGATTTTGTCTACACTCCTTGTGACATAGCTTTAGGGAAAAAACGTACAAGATATGATTCTAATGATTATAGTACATCACAATTAACTCCAGAGGAGTTACCGCTTACTTTAAACAGTATTTCGTCAAATTATGTAGCACCCCAAGTACTGTTGTACAATCCAGAAGTCAACGGAGAAGAATTAGAAGCTGCTTTAAAACAGAACAATATTGACTCTGCAGAGTTTGATAAACTTTGCAATTCTTTAATTGGTACAGATTCTGTTAGAGAATTATTTTCAGCTGAAAATCTTACTACAAGAGATCTAAAAAATTTAGGCCTGGTTATGGACACTCCATCAGAACTTGCAAAGTTTAGTAAAATGGAGATTAATTCTGAAAAAAGAGAGTCTGTAGAAGAAATGACAATCGAAGATACAAATCTTATTACCAGAGTTGAAGCTGAATTAACAGCGTTTATGAAAACACATCCTTCAAATGAAAGGATATCTGTAATGTTGAGAAATATAGTTGAAAATTATCTCACTCCAGGAAACAACAAtgTTTTACATGTGATGGCTGCTAATAACAacatagaaattaattttcggaagaaatttgttcttttaatatACCAACATGATCTGCTTGGTTTATTTaactgtaaaaatcaaaatggacaAACTCCTTTACATATAGCGGCTGATACATATAATGatgcatttataaaattgttaatcaAAGCAGAAGTTGATAGACTAATCCCAAATCGACAAGGAAACACAGCTGTACACATTGCTGTACTTAGAAATGCTCCTTCTTCAACTTTACAAGCACTTTTAATTAGATCAGATACTGATGTAGATATAATCAACCATTATAATTTTAgtggCTTTACACCACTGCAATTAGCTGtgacaattaataattttgaagctacaaaaatattgtgtcAGAATAATGCAGCTGTTAACCACTTTAGAATGAAGGATGGATATACACCTTTACATATAGCTGTTGAGAACAGTAATTTAGAAAtagtaaagtttttaattggtCATGATGATATACTGTGTGATGTTGTGGATTTTAAAAACATGGTTGCGTTGAAGCTAGCCCACCAAAACATTAGAATGGAAAATCCTGTAACAGTAGAAATCTATGATGTCATAAAACATGCTATGGAAGCCAATGAAACATTTGATGAACTTTTTCTtgcggatgatgatgatgaaagtGAACAGTATTTCTGTCAACTTTGA
- Protein Sequence
- MFPMGMLTNHIQLQTNAFNMNLYPNTLTPPMDSPPTEMSSSPIYLYDSYEIPTGYTNSFGPLPSLKILEQPVDRFRFRYKSEMSGTHGSLCGLTSDRSRKQTYPCVQLLNYNEPAVIRCSLYQYGRENTAYSRQLHAHRLVKKQGAEEIDDPHEIVVNSDSGYIANFHSMGIIHTAKKFIIPELIRKNTRLKKEEIARADGELRPLTKKEDIDIRSLAEKESKCINLNVVCLRFDAYKVYNSVYYPLCEPVYTHAINNLKSALTGDLKIVRMDHCSSSCRGGREVFILVEKVTKKNIKVRFFELDEEDREIWSDYGRFSDLDVHHQFAIVFKTPPYKNTDIDKQVRVYIELQRPSDGARSEAKDFVYTPCDIALGKKRTRYDSNDYSTSQLTPEELPLTLNSISSNYVAPQVLLYNPEVNGEELEAALKQNNIDSAEFDKLCNSLIGTDSVRELFSAENLTTRDLKNLGLVMDTPSELAKFSKMEINSEKRESVEEMTIEDTNLITRVEAELTAFMKTHPSNERISVMLRNIVENYLTPGNNNVLHVMAANNNIEINFRKKFVLLIYQHDLLGLFNCKNQNGQTPLHIAADTYNDAFIKLLIKAEVDRLIPNRQGNTAVHIAVLRNAPSSTLQALLIRSDTDVDIINHYNFSGFTPLQLAVTINNFEATKILCQNNAAVNHFRMKDGYTPLHIAVENSNLEIVKFLIGHDDILCDVVDFKNMVALKLAHQNIRMENPVTVEIYDVIKHAMEANETFDELFLADDDDESEQYFCQL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -