Lhir026033.1
Basic Information
- Insect
- Lagria hirta
- Gene Symbol
- tfip11
- Assembly
- GCA_947359425.1
- Location
- OX375797.1:17349586-17354973[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.2 1.7e+04 -4.3 0.1 182 196 229 244 227 247 0.71 2 3 1.2e-96 1.8e-92 310.6 14.8 2 275 399 669 398 669 0.98 3 3 0.25 3.7e+03 -2.0 0.0 242 270 681 709 673 712 0.70
Sequence Information
- Coding Sequence
- ATGTCAGAGGATGAAATGGAAAAATTTGAAATCACCGACTATGACTTAAACAACGAGTTTTACCGTGGCCGCAAAAAATTAACTAAACATCAACAAATTTATGGTGTGTGGGCTGACGACAGTGATAATGATGACAATGAGAGGCCCTCTTTCAAAGCAAACAAACCTAAGAATTATTCGGCGCCCATTGGGTTTGTAGCTGGTGGGGTGCAGCAAGCCGGCAAGAAGAATGAGAAAGTAAAAGAAAAAAATGGGAGTGATGGAGATGAACCAACAACTTCTTTCAAGGCAAAGAATAGCTCTAGTGATGAGGAGGAAGGTCGAGCCAGGCTAGGTATGCAATCTAAAAACTACAACGGTTTATTGTTGTTTTTAATGTACTTAAGCTGTTTCAAGGGTCTATGGTTTGGAGGCAGTGATTCTGCTGAAATAGCTGGATTGCGTTCAAAGAGCTCTCGCTCTGGTCCCGGCTTACAAAATGTGGGAAATTGGGAGCGGCATACCAAAGGCATTGGAGCAAAACTTTTACTGCAGATGGGATTTCAACCTGGCAAAGGTTTAGGCAAAGATCTTCAAGGTATTTCAGCACCGGTGGAAGCGCATTTGCGAAAAGGACGGGGAGCCATCGGTGCCTACGGTCCCGAGAAAAAGACGCAAATTCTCAAACCAGCCGACTTCAAAGTAGAAAAAGTAGATGAAGCGTTACACAAATGGAAAAAAAGCGAATCCAGTACGAAAAAAACACGCTATTATTATCGTAGCGTTGATGACGTAATAGAGAAAGGCAAAAGACCTGGGGCTTTTGGTTTCGGACCTAACAGCGAATTAAGTAAGGTCAAAGTAATTGATATGACTGGACCTCAACAAAGGGTGTTGAGTGGATACCATGCTTTAAGTGGTTTGAAAGCTCCACCTGGCGTCGAACATTTTGAAGATGTTGTTCATAAGAAATGTTCAAATTTTGCATTACCAGAGATTCAACATAATTTAGATGTTTTAGTGGATATGTGTGAGCAGGACATTATTAGGGTGGACAGGAATTCTAGGAATGGACAAGATAAGTTGGTGGTTTTGGGACAAGAGCAAGAGAGTTTACGGAATTTAATAGAAAAAGAAGACGCACTTGTTGAGAACTTAAAAGATGTAATGACTGTTGTAGATAAACTGCTGGATCCGGCTTTGGGACTATCGTTACTTCAGGTGGAACATATTTTTGAAGATTTGCAGGAAAATCATTTGGAAGAATTTATTAGATACGAATTAGGTGAGCTAGCTCCAGGTCTTGTTGGCCCTTTGTTAACTTCAGCTTTGGCAAGTTGGTCACCTTTAACTAACGCCAAGCAAAACTTGGCAGTTTTCAAACGATGGAAGGATATTCTGGACAATCCCAGACAACGTGGGACACTAGAAGGTAATAATATGGGAATTCAGCCATATGATAGTCTCTTATGGCACACTTGGATGCCTGTAATGCGAATTTGTGTTAGTACATGGAATCCTAAAAATTGTGATCCTATGATTACATTAATTGAGACTTGGATGCCACTACTGCCACAATGGATTTTGGATAATATCTACGATCAGTTGATTATGCCGCGAATACGATCCGAAGTCAATATTTGGAATCCAGTGACTGATACTATTCCCATTCACGTATGGATTCATCCTTGGATTCCACTTCTAGATACACGTCTTCAAGCTGTAATATATCCCATAATACAGGAAAAATTAGGAGTTGCCTTAACTAATTGGCACCCTTCAGATAAGTCAGCAAAACCAATGTTAAAACCCTGGCAACGAGTCCTACCAGATGGCGTCTTTGTTGCTTTTCTCATAAAACATATAGTACCCAAATTACAGATGTGCATACAGAATTTGGTTATTAATCCTCATCAACAGCATTTAGATGCTTGGTATTGGGTCATGGACTGGTCGGATATGTTGTCAGTGGGCAATATGACTTTGATTTTGGACCAATTTTTCTTCCCTCGTTGGGAACAAACTTTGGCAACGTGGCTGAATCTTAATCCTAATTACGCAGAAGTTACAGATTGGTATTCTGGTTGGAAAACTATGTTATCTGAAGATTTGTTAGCACAACCCACCATCAAAGAACACTTTCAAAAAGCCTTAGTGATCATGAACAGAGCGGTTAATATTGGTGCCCAGCCTGGAGCGAAAGAATCAATATCATATCTTAGCAGCATGGAAAACAATGGACCTCCACCACCACCGCCGCCATCACAGGTTGAGAGTTTCGCCGAAACCGTTCGGAGAGTGTCTAAGATCCCACGTATATACAAAGATTTGGTGGCTCAAAGGTGTGAGGAAAGAGGAATTTTGTTTGTTCCTATTCCGAATAAGTACCACGAAGCGAAGCAAGTGTACAGAATAGGTTCTAACGGACTACAGTGTTATATTGACAGAGGCGTGGTTTTTTCATGTCGAAATACTACGAGCTGGATACCCACCGCGCTACACAAACTTTTGGATATGGCTTAA
- Protein Sequence
- MSEDEMEKFEITDYDLNNEFYRGRKKLTKHQQIYGVWADDSDNDDNERPSFKANKPKNYSAPIGFVAGGVQQAGKKNEKVKEKNGSDGDEPTTSFKAKNSSSDEEEGRARLGMQSKNYNGLLLFLMYLSCFKGLWFGGSDSAEIAGLRSKSSRSGPGLQNVGNWERHTKGIGAKLLLQMGFQPGKGLGKDLQGISAPVEAHLRKGRGAIGAYGPEKKTQILKPADFKVEKVDEALHKWKKSESSTKKTRYYYRSVDDVIEKGKRPGAFGFGPNSELSKVKVIDMTGPQQRVLSGYHALSGLKAPPGVEHFEDVVHKKCSNFALPEIQHNLDVLVDMCEQDIIRVDRNSRNGQDKLVVLGQEQESLRNLIEKEDALVENLKDVMTVVDKLLDPALGLSLLQVEHIFEDLQENHLEEFIRYELGELAPGLVGPLLTSALASWSPLTNAKQNLAVFKRWKDILDNPRQRGTLEGNNMGIQPYDSLLWHTWMPVMRICVSTWNPKNCDPMITLIETWMPLLPQWILDNIYDQLIMPRIRSEVNIWNPVTDTIPIHVWIHPWIPLLDTRLQAVIYPIIQEKLGVALTNWHPSDKSAKPMLKPWQRVLPDGVFVAFLIKHIVPKLQMCIQNLVINPHQQHLDAWYWVMDWSDMLSVGNMTLILDQFFFPRWEQTLATWLNLNPNYAEVTDWYSGWKTMLSEDLLAQPTIKEHFQKALVIMNRAVNIGAQPGAKESISYLSSMENNGPPPPPPPSQVESFAETVRRVSKIPRIYKDLVAQRCEERGILFVPIPNKYHEAKQVYRIGSNGLQCYIDRGVVFSCRNTTSWIPTALHKLLDMA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -