Lhir001255.1
Basic Information
- Insect
- Lagria hirta
- Gene Symbol
- spn-F
- Assembly
- GCA_947359425.1
- Location
- OX375798.1:17334491-17335831[-]
Transcription Factor Domain
- TF Family
- TSC22
- Domain
- TSC22 domain
- PFAM
- PF01166
- TF Group
- Basic Domians group
- Description
- These proteins are highly similar in a region of about 50 residues that include a conserved leucine-zipper domain most probably involved in homo- or hetero-dimerisation. Drosophila protein bunched [1] (gene bun) (also known as shortsighted), a probable transcription factor required for peripheral nervous system morphogenesis, eye development and oogenesis.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.4e-07 0.0025 18.7 0.1 10 46 9 45 8 50 0.93 2 3 0.0004 4 8.4 5.0 15 33 55 73 51 120 0.88 3 3 0.1 1e+03 0.7 0.0 15 53 172 210 170 223 0.78
Sequence Information
- Coding Sequence
- ATGGAGGAACCAGTAGGAGCTCAATATGCTGTCCACATAGCCCTTCATACTTTGAAGGAGCGCTGCAAGAGTCTTCAGCAAAGAGTTGGAAGTCTTGAAGAAGAGAATTTAAGTCTTCGAGTGCAGTGCTCAAAAAGCGACCAAAATGGGGCCCCTCTTTCAGAAGTCGATAAACTTAAGAGACAAATAACAGAACTATCTGAAAATAAACAGCAACTTCTGAACAAGGTTCGTATGGTTACAAATGAGAACCAGGAGTTGTGGAGTAGGTTAAGTACGTTAACGCATGCAAATCAGAATTTAGGAACGCAACTAAATAAACTAAATGATTCGTTAAATCAATATACAGCAAAAAATAAGGAGCATGCTCCTTTGATTCGTTCGAAAACGTTTACTCAGGAGGCCCCACAGAATAAAGTGCTGCAGAAAAATTTAGAAGAAAATAGCAAATTGTGTGCGGAGCTCGAAGAGATATCATTGAAGATTATCAATAGTTTTGCTCAGGGAAAAAGTGAATTAGATTCTCTGTATTCAGAAATTACAGAAGTGCAATATAACGATACTATTATCACCGACTCATGTGGATTTTATTATGATGATTGTGATAATAATATAATGGATAATTTTAACAGTGTTTTAAAAGAACTGAAAGCTTCCAAAGAGGTAGTCTACAGTCAGAAAGTTGCCCTAAAATTAGCTCTAGATAAAATTACGACATTAAAAGAAATTAAAAAAAAGCTGATCTGTGATAAAAAGAAGAAAGTAGAAATGGTTGATAAAGGCACGTTTACTATTCCATCAAACGAGGTGACGGAATCTCCGCCAGAACCAACGCCTAGCTGCACTCCAACAGCCCCAGAGGATGATATCCCTGATGATGTGATGATTTGTCCAGTTTGCTGTAGAACCTTCTTTGACACAACGTTCCAAGACTTCCAGATCCACGTAGAAAAGCATTTTACTGAAGAAGAGACTTTTGAAATATTATGA
- Protein Sequence
- MEEPVGAQYAVHIALHTLKERCKSLQQRVGSLEEENLSLRVQCSKSDQNGAPLSEVDKLKRQITELSENKQQLLNKVRMVTNENQELWSRLSTLTHANQNLGTQLNKLNDSLNQYTAKNKEHAPLIRSKTFTQEAPQNKVLQKNLEENSKLCAELEEISLKIINSFAQGKSELDSLYSEITEVQYNDTIITDSCGFYYDDCDNNIMDNFNSVLKELKASKEVVYSQKVALKLALDKITTLKEIKKKLICDKKKKVEMVDKGTFTIPSNEVTESPPEPTPSCTPTAPEDDIPDDVMICPVCCRTFFDTTFQDFQIHVEKHFTEEETFEIL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -