Basic Information

Insect: Lacanobia wlatinum
Gene Symbol: -
Assembly: GCA_947578705.1
Location: OX388048.1:13553607-13608606[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 4.4 3.9e+02 2.5 1.3 2 23 490 511 489 511 0.88

2 18 0.0015 0.13 13.5 0.1 1 23 521 544 521 544 0.95

3 18 0.16 14 7.0 1.1 2 21 641 660 641 661 0.94

4 18 0.041 3.5 8.9 3.8 2 23 704 725 703 725 0.95

5 18 2.7 2.4e+02 3.2 3.0 1 23 737 761 737 761 0.91

6 18 0.00015 0.013 16.6 0.3 2 23 768 791 767 791 0.97

7 18 0.25 22 6.4 0.4 1 23 797 819 797 819 0.93

8 18 0.0039 0.34 12.1 2.9 1 23 825 847 825 847 0.98

9 18 2.7 2.3e+02 3.2 0.3 2 19 858 875 858 878 0.87

10 18 0.045 3.9 8.8 0.2 1 23 957 979 957 979 0.97

11 18 2.3 2.1e+02 3.4 7.2 1 23 986 1008 986 1008 0.95

12 18 0.0016 0.14 13.3 1.8 1 23 1140 1163 1140 1163 0.95

13 18 0.00026 0.023 15.8 0.7 1 23 1170 1193 1170 1193 0.98

14 18 0.0044 0.38 12.0 0.2 2 23 1216 1238 1215 1238 0.96

15 18 0.00074 0.065 14.4 3.0 3 23 1264 1285 1263 1285 0.95

16 18 0.00017 0.015 16.4 1.3 1 23 1308 1330 1308 1330 0.97

17 18 0.00014 0.012 16.7 0.1 1 23 1336 1358 1336 1358 0.97

18 18 0.00044 0.038 15.1 0.7 3 23 1366 1387 1364 1387 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	4.4	3.9e+02	2.5	1.3	2	23	490	511	489	511	0.88
2	18	0.0015	0.13	13.5	0.1	1	23	521	544	521	544	0.95
3	18	0.16	14	7.0	1.1	2	21	641	660	641	661	0.94
4	18	0.041	3.5	8.9	3.8	2	23	704	725	703	725	0.95
5	18	2.7	2.4e+02	3.2	3.0	1	23	737	761	737	761	0.91
6	18	0.00015	0.013	16.6	0.3	2	23	768	791	767	791	0.97
7	18	0.25	22	6.4	0.4	1	23	797	819	797	819	0.93
8	18	0.0039	0.34	12.1	2.9	1	23	825	847	825	847	0.98
9	18	2.7	2.3e+02	3.2	0.3	2	19	858	875	858	878	0.87
10	18	0.045	3.9	8.8	0.2	1	23	957	979	957	979	0.97
11	18	2.3	2.1e+02	3.4	7.2	1	23	986	1008	986	1008	0.95
12	18	0.0016	0.14	13.3	1.8	1	23	1140	1163	1140	1163	0.95
13	18	0.00026	0.023	15.8	0.7	1	23	1170	1193	1170	1193	0.98
14	18	0.0044	0.38	12.0	0.2	2	23	1216	1238	1215	1238	0.96
15	18	0.00074	0.065	14.4	3.0	3	23	1264	1285	1263	1285	0.95
16	18	0.00017	0.015	16.4	1.3	1	23	1308	1330	1308	1330	0.97
17	18	0.00014	0.012	16.7	0.1	1	23	1336	1358	1336	1358	0.97
18	18	0.00044	0.038	15.1	0.7	3	23	1366	1387	1364	1387	0.95

Sequence Information

Coding Sequence: ATGACAGAGCCACAGCCACCCCTGATCCTCTGCATGGAGAATGCTACTGGTGAGGAAGTGTCGCTTAGGGTAGAACCTGACGATAACTTCCAAATGTTTCTTGATAAGGCCAAATCACTCCTAGGCTATGAAGTAGATATAAACTCGATAACCAGAAACCAGCCCGTGTCTTTATCAGAAAACGTTTACCAATTCCTAGTCAACGCCGAACAAAACTTACAGGCGGACGAGCTAACACAAAACTTTGATCAAATGTTGGACACCAACGATGGAGCCAACGACTTGGTCTACATATTAGACGATGGCACTCAAATCCGCGCCTCGCAAATACACTTTGACAATGACGATCCTTTGGTCGATCTGACTGCAGAGAAAATACCTTTTGTTAAGTACGCTGACGATGTCACTGATATAGATTTCGACGATACGAGCATTCAAGAAACTAAAAAGATTAACATTGTTGAGAGTCCTGTATCGCGATGGTCTAGTAAAAATTCCAGTCCAAAATGCAGTTTCGTCAATTCTCTACCGTTCAAACTAGTATGCAATAATACCTCAGGTTTCGAAGCTCAATTCACGAAATATTTAGAAGCGAATACAACTAAGACGTACGCGACTTTGAATCCTGTGACCACTCGGAATAAATCGCCGAAGAGTTTGATCAAAGATAATTTTAAGAACTATGATGATAGTTATCAGAGGAATGATAACTTGTCTTACACAAGAGAGGAGATTTTGAACATGTTCAAGGATTCCCCGATGACGTCATTGCCTTATGACCAGGGTTATAGTGAACGGAGACATGTTAGGAAGACAGACCCCTCAAGACTTGTTCACAAGACTTGGAGCAAGCCTCTCTCGTACGTCGATATTGACGGAGTGTTGATAGGGGAGAGTGAGAGTCAAATCTGTTTTATCTGCGGCAAAAATGTGGATAATAATGTTGATAAATTGTACCTCTTTGATAATGAAGACCAGAGGCTGTATAGATGTTCCCCGCAGAAGAAAATGTCGACGCAACTGAAAATTATCTGCGAATGTTGTCTGAACGAGAATTTTACGCCGTGTCGAATGAAAAGCGCCAACCAATTCTTGAATCCCGATGAATATCTCGTGATAAGAAATAACCAGCAATACATCTTCCAAAAAGTTAAAAACTTCAATTTTGCGCACCTAGGTAAAGCAAAAGATATCATAAACAAGATAGAAAAGAGAATTGAAAAAGAAGAGTTTGTTAAAGTCGAAATAGGTTCTGATGGAGAAATTATTACGAAACCCATAGACAATAGGTCTGATGACGTGGTCATTGTTAAAGATGAGAAAAGGGAGGGTAGTTCGAGTGACGTGGAGATTGTGGAGCCGGAACCGGAGATAGATCATATCATAGACAATTTGGAGGAAGCTGATGAGGAGGTGAAAGAGTTTTTGGGAAAATACCAGCGGGATGATAGTGAAGTTACCGAGTTAAAATGCAGATTCTGTGAGCAAGTCTTCCCGCACCTGGCGGCGGTGATAGACCACTGTGAAACGCACAAACATGACCTAGAAGATGGTGAAGTGTTTCCATGTCCCCTCTGCAATTATGGTTATGCAAATTTGAAATATCTGAAAGCCCATGTCAAGGCGGCCCACGAGAAACGTGAAACTTCTAAAATATTAAAAGACGAAAATGAGCCTGATAAAGAAGAGAATAAAGACAGTGAAAAGTCTTCAGAAGAATTAAAAGCGGATTCTAATACTGAGGCGACGGAGCCACCCATCATAAAAACGGAGGTAAAGCAAGAATGCCTGGACAGCAGTGAGGATGAGATCTGGATCGTCCAGACGGCTGATGCTGAAGCTACTCAGGAGCTGCAGAAACTACTGTGTAGTGCTAAGGTCAAAGAAGGTGGCCAAGATGGTGCATCCAAAAAGACCCCCAAATGTTTTAATTGCAGCCAAATATTCGCGAACGCGGACGGCCTGTCAAACCATCGCTGCAGAAGACGAACCCGCAAGCGGAAATCCAAAGACCTGGGCAACCTCATATGTATACCAACCGAAGAAGACTTTCTGAAGCGTCCCCGAAAACGCCGCAGCCGGGAACCGACCTCCAACCCTCAGGTGGTGACCTGTCACAACTGTAACGAATCCTTCACGTCTAAAGTTAGACTCAAGTTTCACATGCAGTTCCACGAAAACTCAAACAAAGGGCGCACAGACGGCCGCTACTCTTGTTCGGAGTGCGACGACGCCACCTTCTGCACCGAGACGGAACTCTTCGACCACGTGCACTTCCAACACGACAAGCAGAAACGGTGGCAGTGTCCCGTCGAGGGTTGCGGAAAGACCTTCTTCCTCAGGGCAACCCTCACAAAGCACAGTCGCACGCACACAGACACGCGTAGATACGTATGTGTTACATGCAACAAGAGGTTTCTGGACAAACAGACGCTGGATGAACATGGAGTCACGCATTTACAGATCAAACCCTTCCAATGCCACATCTGCCTAAAGCAGCTGACACGTCGCTCTCGTCTGCGCATGCACGTGCGCGCGCACGAAGAGGAGCTGGCGCCGCGGCTTGTGCGCGTCTGTGCGGTCTGCACGAGGGCGTTCCGAGACCATCTGCATGCACAAGAACACGCATCTAAATCGACGGAATGTATCGAAGCATTCGCAAACGAGTTGAAAGAAGAAGCAGAAGAGGTATCAGTACAGTTATCTCCTACCAGCGGACTCGTGAGACATACTGTGCAGATTGTTGAATCCCCGAAGCTTTCAAAGCCTATAAAGCGGCAAGTGTCAAACGAGATGGGCGAGCCGCTGCTGTCTCAGCTCGCGGATGAAGCGCGCGCTCTGATACGGGTCGTGGAGATCGAGAAGGCGTTCCGCTGCGAGTACTGCGAAGATGTGTTTTACTTGGAAAGCGGTCTGAACACGCACCGTGCGATTCACAAAGGAGTCAAGAATCCCTTCACCTGCCACATCTGCAAAGTTAGCTTCGCTACTTATTCCAGATGCACAACCCACAAAACAACCCACGGCTTCTACAAACGCTCACTAGCCGACGCTAAAAAACAAGCCGACGCCAAGAAACAAACCGACGGGCCAACACAACCCGACGCCGACAGCTCTGTCCGCTCAGCCGCCGGCATACTAGGATACGGCGACTTTCCTGTCGTCAAACACTTCCTGTGCGAGGTAACATTAGCTAAGAAACATGCCGATAGTCCATCACAAGCCGACGCCGACAGCTCTGCCCGCTCAGCCGCCGGCATTCTGCGATACGGCGACTTTCCCGTCGTCAAACACTTCCTGTGCGAGGTAACATTAGCTAAGAAATATGCCGATGGTCCACCACAAGGCTACGCCGACAGCTTTGCCCGCTCAACCGCCGGTATACTGGGATACGGCGACTTTCCCGTCGTCAAACACTTCCTGTGCGAGGACTGCGGGCGCTCGTACCTGCACTGGACGTACTTACAAGTACATAGACGTATGAAGCACGCGAACGAAAACTTTCTGTACAAGTGTAACCAGTGCGAGCTTACATTTCCTAACAGTTGGAGCTTGGCTTACCATCGGAAGAAAGTGCACGGTAGGAACGGAGCTGATGACCCTGGAGCAGCCACTAACAAGACCAACAGGGAAGATTATAGGATACCGTGTCGGGATTGTGACGAAGTGTTGCCGAACAAAACGGCTTTGTACAAGCATCGTAAGAAGGAACACAGCGATGGAACTACACGCTCTTATACTAAACCAGGCATGTACCCGAACGCAGAGTCAGAGTCTACGGGCGGGGCGTGTCCTCACTGCCCCGCTACGTTCACGCACACCAGCGACCTACACAAACATGTCAAAGAGATCCACGGCAAAGACGACGACTCCTGCGCATCCTACAACAAGACGTCTGACGCGTCATGTCCGCGCCGCCCGCACGTGTGCCCCGTATGCGGGCACGCCTTCCGCACGCTGTCCATGCGCAACGAGCACCTGCGCGTGCACACCGGCGAGCGACCCTTCCCGTGCGACGTGTGCGGAGTGGCCTTCAGGAGGTCCACAGCTATGCGCAACCACCGCCTGATCCACACGGGGGTGCGCGCCTGGGCGTGCGGGCGCTGTCCCAAGCGCTTCCGTATCCGCTCCGACCTGCGCACGCATCTGCGCCTCAAGCATCCTGCTACTATTGTAGTAGTAGAAATGGAAGGCCTGAACCCGACGTCTGATGAAGTCCTGAAAGCGCTCGAAGCACAAAACGTTCCACACGACAAGCTTATAGATATCACCAAGATGTCTTTTATCAAGGGCTCGACGAGCGTGATTCCGACGTGCGCGCGCGCGCTGTCGGCGCTCAACAACGTGCCGCGCACGCACGTGGCCTGCCTCAAGCCCACTCCCGCACGTATGTTGGAAGAGTTGCCGGCGCGGCGCGGTCGCGGCATCGCCAAGAACCCGCGCCGCCCCAAGATACTGCAGCGCGGGGACGCTGAGCCCCACAGCGCTGACTACCCCGGCGATGGCGCAGAGGAGCTATCGGACATCAACGTGCAACTGTTACTTCGGGACGGTGTCCTAGTCAACGACAATCAGATGGTACAACTGCAGTTAGATGACCCTATATTGATGGAGTAA
Protein Sequence: MTEPQPPLILCMENATGEEVSLRVEPDDNFQMFLDKAKSLLGYEVDINSITRNQPVSLSENVYQFLVNAEQNLQADELTQNFDQMLDTNDGANDLVYILDDGTQIRASQIHFDNDDPLVDLTAEKIPFVKYADDVTDIDFDDTSIQETKKINIVESPVSRWSSKNSSPKCSFVNSLPFKLVCNNTSGFEAQFTKYLEANTTKTYATLNPVTTRNKSPKSLIKDNFKNYDDSYQRNDNLSYTREEILNMFKDSPMTSLPYDQGYSERRHVRKTDPSRLVHKTWSKPLSYVDIDGVLIGESESQICFICGKNVDNNVDKLYLFDNEDQRLYRCSPQKKMSTQLKIICECCLNENFTPCRMKSANQFLNPDEYLVIRNNQQYIFQKVKNFNFAHLGKAKDIINKIEKRIEKEEFVKVEIGSDGEIITKPIDNRSDDVVIVKDEKREGSSSDVEIVEPEPEIDHIIDNLEEADEEVKEFLGKYQRDDSEVTELKCRFCEQVFPHLAAVIDHCETHKHDLEDGEVFPCPLCNYGYANLKYLKAHVKAAHEKRETSKILKDENEPDKEENKDSEKSSEELKADSNTEATEPPIIKTEVKQECLDSSEDEIWIVQTADAEATQELQKLLCSAKVKEGGQDGASKKTPKCFNCSQIFANADGLSNHRCRRRTRKRKSKDLGNLICIPTEEDFLKRPRKRRSREPTSNPQVVTCHNCNESFTSKVRLKFHMQFHENSNKGRTDGRYSCSECDDATFCTETELFDHVHFQHDKQKRWQCPVEGCGKTFFLRATLTKHSRTHTDTRRYVCVTCNKRFLDKQTLDEHGVTHLQIKPFQCHICLKQLTRRSRLRMHVRAHEEELAPRLVRVCAVCTRAFRDHLHAQEHASKSTECIEAFANELKEEAEEVSVQLSPTSGLVRHTVQIVESPKLSKPIKRQVSNEMGEPLLSQLADEARALIRVVEIEKAFRCEYCEDVFYLESGLNTHRAIHKGVKNPFTCHICKVSFATYSRCTTHKTTHGFYKRSLADAKKQADAKKQTDGPTQPDADSSVRSAAGILGYGDFPVVKHFLCEVTLAKKHADSPSQADADSSARSAAGILRYGDFPVVKHFLCEVTLAKKYADGPPQGYADSFARSTAGILGYGDFPVVKHFLCEDCGRSYLHWTYLQVHRRMKHANENFLYKCNQCELTFPNSWSLAYHRKKVHGRNGADDPGAATNKTNREDYRIPCRDCDEVLPNKTALYKHRKKEHSDGTTRSYTKPGMYPNAESESTGGACPHCPATFTHTSDLHKHVKEIHGKDDDSCASYNKTSDASCPRRPHVCPVCGHAFRTLSMRNEHLRVHTGERPFPCDVCGVAFRRSTAMRNHRLIHTGVRAWACGRCPKRFRIRSDLRTHLRLKHPATIVVVEMEGLNPTSDEVLKALEAQNVPHDKLIDITKMSFIKGSTSVIPTCARALSALNNVPRTHVACLKPTPARMLEELPARRGRGIAKNPRRPKILQRGDAEPHSADYPGDGAEELSDINVQLLLRDGVLVNDNQMVQLQLDDPILME

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00121732;
90% Identity: -
80% Identity: -