Lole006550.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Lacanobia oleracea
Gene Symbol
Rel
Assembly
GCA_950371165.1
Location
OX493387.1:11858598-11886028[+]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.5e-11 1.9e-07 32.6 0.0 93 168 25 102 16 103 0.84

Sequence Information

Coding Sequence
ATGCGGCGTCAAGTGGTTCGCTCGCCTCGGTCGAACTTATCGTGGGAAGGGTCGGGTGACGCTCTTGATAGGTTTGGCGGTATCGGTATTATACACACTGCTAAAAAGGATGTCGCCGGTCTTCTGTACAAGAAGATTTCTGAACGATGTAAAGGTACCAACATGAACATGAGTGACctTAAAATGCAATGCGAGAACATGGCCAAAACAATAAATCTAAACATCGTTCGATTGAAGTTCAGCGCGCATGATATTGTAACGGGGCAAGAGATCTGTGAGCCTGTTTTCTCCGAACCCATTCACAATATGAagagTGCAGCCACTAACGACTTGAAGATATGCCGTATAAGTCGTTCCTCCGGAAGTGCTTCTGGTGGCGAAGATGTCTTCATATTAGTCGAGAAAGTGAACAAAAAGAACATTATGATTCGCTTCTTCGAGTTGGACGACAATGGTGAAAGGATCTGGAATTGCGTGGGCCAGTTCATGCAGAGCGATGTCCATCATCAATATGCCATCGTTTTTCGGACACCTCCGTACAAGAACCCAGAGACGCCTGTGGATGTCCAAGTCTTCATAGAGCTGGTGCGTCCCTCAGACGGCCGCACTAGCGAACCTAAGGAGTTCAAGTACAAAGCCAACCAAGCATACAAACAGATCAAGAAGAGGAAAGCCGGATCCTCGTATTGCTCCATTGGCAGTTCATCTAGTGGATCATTGACAAGTGGCAGCGGCATTCCCTTATCCGTTGTAAAACAtcaGGCAGAAGAGCCCATGGAACACGTGCCAGATCCGTTGTTTATCTTACCTCAGATGCACGGACCAATTTCACCCAACCAATGCGACTTGGCGAGCGCGTTATACTCGGCGCCTGGGTCTGACATGAGCCAGACTCCGCTGTCCAGTCCCATGTGGAGCAACAGTCCGCAAAGTGTTTTGCTACCAGAGCCACCCATTAGAGACCTGCACCTCGACTCTTCGGAGTTGGAGCAAATAACCTTACCTAACAGCGAACCTGCAAGTCAGCTACCAGACGAAATGAAAACGTTTTTCAATGAATACTTGAAGAGTTATGGTGAAAGTTTGCCTGAAGTAAATAGCATGGAGTTCATTCGTTCAACGCTAATTGCGGACTCGGGTCGGGCAAAGccGCAATCGGGCGCGATGCGTTTACAAGGGGACCGAGGACAAACGACCAATCagaacaaagaaaatattaagaCTACGAAGAACGAGTATCCCGCGTTTTACAAAACCGAAGACGGCATCGAAGTAAAGAAgCTCGTCAAAGATTTGTGTGAAATGATAAGAAACAAAAAAGGCTACAAAAAGGCAGAAGTCCGAAGCCGCTTGGAAAGGCTGTTTGAAATAAGACTTTCAAATGGAGATACCTTCCTCCACATGACTCTGTGCAGTAACCAGCCAAGTCTCGAGTACATCGTGAAGATAATTCACGGCGTGAAAGCTACGCACCTACTTGACTGTTCGAATGACAGGCAACAGACTACCCTACATCTTGCGGTCCTCAATGACATGCCGAAAATGGTGGCGTTGTTTATTGCTAAAGgtTCAAGCCCAATGATGAAGGACGACAAAGATCTGAACGTGGTCCACTACGCTGTTAAGTACAGGTCTTGTTTAGAGGTCCTTCTCGACTCCATCAAGAAACACGACGTGCCTTGCGATTTGAACGATTTCAATGGCGAGCATCAATCAGCCCTACATATGGCTGTAGTGTCGGGTTGGGAGCAGGGAACCCGCTTACTCCTGCAACACGGCGCAAGCTACAGCGTGCGCGACGCGGAGGGACGCACACCTCTGCACCTCGCCGCGTACGACGACAGACTAGCCATCATGAAGATACTGCTCGAGTTTATACCTTCCagcGAAGTTGACGTCATGGACGACGCTGGCAACACAGCCTTGCAAATTGTCTGCGGCGGTACGACGATCATGGAAAACTCTGTTGAAATCGCTCGGCTTTTACTGGACAAGAAGgcgtACCCTCTAAAACACGAGGATAGCAACGAATCAGCGTGGAGGCTCGTGAAGACGAAGCCTGAGCTCAGAGAACTGATGAAAGCCTACGTCACAGTGGAGTGCATGGACGAAGATGACATCAAGTCCGAACCAGAAGACGACTACGAATCGGCTGACGAAGGCGACTATCCGGAGGCTGGTCTCCAGGACATGAACCTGTACGCGCGGGAGGTGTCGGTGTTGGTGGACCAGGCGGGCGTGTGGCGCGACCTGGCGCAGCGCCTGCGACTGGACGCGCTGCTCGACTGGTACGCCGCTCAGCCCAGCCCTACGCTCACACTGCTCAAGCACCTCAAGGAGTCCCGAGATGACATATCATCAAAGTCTTTGGCGATGATTTTGGAAGACATGGGCCAAAACGAGGCGGCCTGTGTTATTAGGCGGTGTATCAACTGA
Protein Sequence
MRRQVVRSPRSNLSWEGSGDALDRFGGIGIIHTAKKDVAGLLYKKISERCKGTNMNMSDLKMQCENMAKTINLNIVRLKFSAHDIVTGQEICEPVFSEPIHNMKSAATNDLKICRISRSSGSASGGEDVFILVEKVNKKNIMIRFFELDDNGERIWNCVGQFMQSDVHHQYAIVFRTPPYKNPETPVDVQVFIELVRPSDGRTSEPKEFKYKANQAYKQIKKRKAGSSYCSIGSSSSGSLTSGSGIPLSVVKHQAEEPMEHVPDPLFILPQMHGPISPNQCDLASALYSAPGSDMSQTPLSSPMWSNSPQSVLLPEPPIRDLHLDSSELEQITLPNSEPASQLPDEMKTFFNEYLKSYGESLPEVNSMEFIRSTLIADSGRAKPQSGAMRLQGDRGQTTNQNKENIKTTKNEYPAFYKTEDGIEVKKLVKDLCEMIRNKKGYKKAEVRSRLERLFEIRLSNGDTFLHMTLCSNQPSLEYIVKIIHGVKATHLLDCSNDRQQTTLHLAVLNDMPKMVALFIAKGSSPMMKDDKDLNVVHYAVKYRSCLEVLLDSIKKHDVPCDLNDFNGEHQSALHMAVVSGWEQGTRLLLQHGASYSVRDAEGRTPLHLAAYDDRLAIMKILLEFIPSSEVDVMDDAGNTALQIVCGGTTIMENSVEIARLLLDKKAYPLKHEDSNESAWRLVKTKPELRELMKAYVTVECMDEDDIKSEPEDDYESADEGDYPEAGLQDMNLYAREVSVLVDQAGVWRDLAQRLRLDALLDWYAAQPSPTLTLLKHLKESRDDISSKSLAMILEDMGQNEAACVIRRCIN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01192390;
90% Identity
iTF_00951564; iTF_00973491; iTF_00952475; iTF_00299919;
80% Identity
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