Lmin014050.2
Basic Information
- Insect
- Labia minor
- Gene Symbol
- salm
- Assembly
- GCA_963082975.1
- Location
- OY720346.1:4187860-4198289[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.0052 0.82 11.3 0.4 2 20 65 83 64 85 0.94 2 11 4.9e-06 0.00077 20.8 0.9 1 23 385 407 385 407 0.98 3 11 9.7e-06 0.0015 19.9 2.1 1 23 413 435 413 435 0.98 4 11 0.061 9.6 7.9 3.8 2 23 765 786 764 786 0.98 5 11 4.2e-08 6.6e-06 27.3 0.6 1 23 792 814 792 814 0.97 6 11 5.9e-05 0.0093 17.4 2.6 1 23 824 846 824 846 0.98 7 11 0.0025 0.39 12.3 2.1 2 23 1109 1130 1108 1130 0.97 8 11 0.053 8.3 8.1 0.9 1 14 1136 1149 1136 1150 0.92 9 11 2.8 4.4e+02 2.7 0.0 11 23 1187 1199 1183 1199 0.84 10 11 5.9e-06 0.00092 20.6 6.2 3 23 1329 1349 1327 1349 0.96 11 11 1.1e-07 1.7e-05 26.0 0.9 1 23 1355 1377 1355 1377 0.98
Sequence Information
- Coding Sequence
- ATGTGGCTTCTGGAAAAGAAAAGGTCACCATCGACATTTACAGCCTCTCTAATTACTTGTCAACGTACTGGCAATGCATTTGCAATTCTTCATCCGCCGCCCCTTTATATGGGAGAAGAAGAGATGGGGAGCTCTTCACCGGCAGAGGAGAGCTGTCCCGGTTCGTGTTCTGACGATGAAGGTGGTGTCTCCCAGTGTCCCCACTGCCATTTGGAATTTTCCTCACTTGCGGAACTACTCGAACACCGAACAGAATGCTCACGTGCTGGAACAGCAACTTCAGAGAATGAGGACGAAGGGACTAAACGTCTTCGACAACGTCAGGATGCTGAAAACAACAATAGTGATGAGTTGGATTCCCCCCCTCCTGGAGGCGTAGCTGCTGCTGCAGCAGCTGCTGCAGCTGCATTTGGGGTTGTTCCCGTCCCCGGCCATGTCACTCTTGAGGCTTTACAGAATACCAAAGTTGCCGTGGCACAATTTGCGGCTACCACAATGGCAAACAATGCCGACAACCCCTCTGCATTGCAAGAACTTGCCGTTCTTCAATCAACGCTTTTTACTTTGCAACACCAACAAGTGATGCAATTATCGTTAATACAGCAGCTACAACAGCAATTACAAATCAATCGATCAAAAGATCCTTCGCTCTCACCGCCTCCAGCGCCTCAATCACAATCAACATCAGTTGTTGCACCGCCCGTACCTATTCCGCAGCCCCCGCCCCCTCAGCCCCCTCGTCCAAAAACCCCATCGCCAGTACCTAAGCCAGTGTCACCTCCCCCGAGTGCGCAAATTCTCCCTGCTACAACGACCACCCCAAATACTACAAAACCGCCCCTTCCTCCACCACCCCCGCCTCCTCCGGTACAATCGCAGCCCACTACATCCCCAGGGCCTCTGGCCATGTGCTCTATTTCGTCCAGTTTGGCCTCGTCCATCATTACCAACCCGGAGCCACCTCCGCTTCATGAACCTAATACTCTGGAAATGCTGCAACGACGAGCTCAAGAAGTACTCGATTCAGCTAGTCAAGGACTCCTAGCAGGATCTCTTGCTGATGAACTTGCCTTCCGTAAAAATGGAGGAAAACCGGGTCTTTCTCCATACGACGGCAAAAGTGGTGGCGGGCGCAACGAGCCTTTCTTTAAGCATCGCTGCCGTTACTGTGGGAAGGTGTTTGGCAGCGATTCAGCCCTACAAATACATATCAGGTCGCATACAGGTGAGCGCCCGTTTAAATGCAATGTGTGTGGAAGCCGCTTCACAACAAAAGGAAACCTCAAAGTACATTTCCAAAGACACACGGCCAAATTCCCTCACATCAAAATGAATCCTAACCCTGTGCCGGAACATTTAGATAAATATCATCCTCCTCTTTTAGCTCAACTGGGATCCCCAGGTATGCCTCCTCCACCTAACCATGGACCATCACCAACACCCCCACTTTCTGCACCTTCAGCACCAAGTGGACATACTCCATTTCATCCTTCACCATTTGCTGCTTTGTACAGACCTCCAGGTATTCCAGAGCTTGGAttacctcctcctcctcctccacctATACCTCCTATTCAACCTCCGCCAACAGCGTTACAACGACCTCCAGCTGCTGGAAGTCCTAGTGCTAAACAATCAATTACTCCATCTtcaatgaattcatttattgatCAACAGGAAGCACCTGAAAATTTATCCAAATCTTCACACGAACACCCGTTGTTATCAGAATCTCAACATCTACCACAACGATTTTCACAACCACAACAAACGTCTCTACCTCAACAAATGCAACAAACACAACATGAGGTAAAAAGAGAGCCGAGCGAAGAACGTTATAGTCCAAAAATTGAACcccaagaattaattcatgaaTCTCCTGAAGAAATTGATCAAGATGAATTAGAACGATACCCTTCTCCATATGATGGAAGTTTGGATAGTAAATATTCAGCTGAAGATCTACTTATGGGTGATGAAGCAGAAGATTCTTTACAAGATCAACCTGAAAATCTTTCAAGTAAAGCTAGCAGTGGAGTGGGTGGCCCTCCTCGGATGATTATACCAGGATTATCTTCTTTTCCGGGACCAGTTTCGCCGCCTTCTAGTGCCTCTTCTGGCCAAGGAGATATTGATCCTTCGAAAGATCCAGCGTTATATACATCACTTTTACCCCGTCCTGGTTCTAACGATAATTCTTGGGAAAGTTTGATAGAAGTTGCTAAACCAAGTGAAACATCGAAATTACAGCAGTTGGTGGACAATATAGAACATAAATTAACTGACCCTAATCAATGTGTAATATGTCATAGAGTATTATCGTGCAAAAGCGCTTTGCAGATGCATTATAGGACTCATACAGGTGAAAGAccgtttaaatgtaaaatttgtggTCGTGCATTTACTACTAAAGGAAATTTGAAAACACATATGGGTGTACATCGTGCTAAACCTCCTGTTCGTGTTCTTCATCAGTGTCCCGTTTGCcacaaaaaatttacaaatgccCTTGTGTTACAACAACATATTCGTTTACATACAGGAGAACCAACTGACTTAACTCCTGAACAAATTCAAGCAGCTGAAATTAAAGATTTCCCGCATTCTCCAGTTGGGACACCTTCTTCATTTCCTATAGGCACGGGGTTAGGTCCTTTTATTGGTCCATATCCTGGAATGTCTCCTCTTCCTCCGCCCGGGCTCCATCTTGGCCTTCGTCCTTCTGATTTAGATGATCGACGAGGAGATGAAGCGCTAGAGGCACAAGACTTTTCCAAATCATCCGATTTTATGGACGATGACATTTCTAATGATAGTAGCACAGGGGACGTCGGTGAAGGCGAATGTCTTCCTCCATCATCCATAGTAATGCCATCATTCTCAACGTCATTAGCTGCTTTAGAAAACCAAGTTCGAACTATTACCACTATGGCTTCCGAATTAAATCGCTCATCAGACACATTAAGTGTTCGATCATCCCCTCCGATGATAAAAGTTTCTACGGGGCAACAGAATGGCGATGATGAATTATCAGTAAGGTCACCATCCCAGCCCCGATCGGCAAGTCCTGCGGCCTCCGAGTCCAATTCATTAGGTGCTCTAGACCTGACACCACGCCCGCCTCTTTTGCCCCCGCCTCCGGCGCCTGTCTCATCCAGCATCCAGGCGCCGGTGGTCAACACGACGCCGACTGTTACGCCACCAACAACGGGAGTCTTCACTGGGCTTGGGCTGCTACCTTTGACGACTTCGGTGCTCTCCGCGACGCCAGCATTCAGTCCGATCGGCATGGCCGTGGGACCGGCAGTGCGACCCGGAAATACAACATGCAATATATGCTTCAAAACGTTTGCATGCAATTCAGCCCTAGAAATTCATTATCGGAGCCATACTAAAGAGAGGCCCTTCAAGTGCACTGTCTGTGACCGAGGATTTTCAACCAAAGAGGGATGTCCGGGGTGCGACCAGTGGCGTATCCAGACCCAGGGGTGGAGAGTCCCGGCCAAGAGGCGCCGAGCGCCCCGCCGGGAGCATCCCCATCCAGCTGGATACGCCACTGGCGACCCGGGGAATATGAAACAGCACATGTTGACACACAAGATTCGGGATATGCCCTCGCATCTATTCGAGACGAAGGCACCACTACCACCCCAGGTGCCACAAGTGCCGCAAATACCACAATTGCCGCAGCTTAACCAGATTCCACCTGGACCTCCTCCACCTGGCCCGCCTAGTGATGATGGCTGTGGATCAACCGATGGTGGATCTGCTCCAGCAACACCGAATCCCATCACCACACCAGTGGCACCACCTCAGACAATTGTTTCCAACTGTTCATCGTTGCCGTCTTCAGAAATAACACCACCAATCACCACTACACCTCCATGTCCGAAGCCTACCGATTTGGGAGTGAAACGTTCTCCACCAGAAGGCGAATCTGTTTTGCCGGTCCCGAAAAGACAACCAGGCTTGCCCAAACATTTGTGCCATGTTTGTCATAAGAACTTCTCATCTTCGTCGGCGCTGCAGATCCATATGCGGACGCACACAGGGGACAAGCCTTTTCGATGCACCATCTGCCAAAAAGCGTTCACTACTAAAGGCAACCTCAAGGTGCACATGGGCACACATATGTGGAGCAACGGAGCATCACGGCGAGGGCGGCGGATGTCACTCGACTTGCCGCCCATTCCCATGACCGCAAAGGACTCGGAGTTTCTGCAAAGGAGACCCGACCTCTTCTATCCGTACCTGCCGGCCCCTTTCCTTAATGGGATGCACCATAAACTGAATGAAATCTCTGTGATTCAATCGGTGAATAGTAATATGGCCGGAAACGGACTTAGCCCGCAAGGAAACAAATATGCCAACTTATTGGGCTTCCCAGGTGGTCCAGGAAACACGAATGGAGCAAGTTTTGGAGAAAAACCGGGTCACTCAGAACCTCCATCCCCACTTTCGGATCAACAAGGATCTCCACCACCTCCACAACAGCCGACTCAACCTCAACAAGGTCCTCCTCCTCCGCCCCCTCCTCCACCAATCGCACCAAGACCGCCCATTTCACTCGCCCTTGCTGCAGCGGCGGCAGCTGCAGCAGCTGCGGGTGGATCACCACCTCCAAGTCATGCTCATGCAGCTGCAGCAGCGGCAGCAGCAGCTGCGGCAGTAGCAGCAGCGGACGATGCGCGAAGTGTTTGGGACTTGCATTACGAAAGAAAGCAATTGGACGAACCAATGGACGTGTCTCAACATGGGGCACCCAGAGGAGAGGGTTTGGCCGCTTAA
- Protein Sequence
- MWLLEKKRSPSTFTASLITCQRTGNAFAILHPPPLYMGEEEMGSSSPAEESCPGSCSDDEGGVSQCPHCHLEFSSLAELLEHRTECSRAGTATSENEDEGTKRLRQRQDAENNNSDELDSPPPGGVAAAAAAAAAAFGVVPVPGHVTLEALQNTKVAVAQFAATTMANNADNPSALQELAVLQSTLFTLQHQQVMQLSLIQQLQQQLQINRSKDPSLSPPPAPQSQSTSVVAPPVPIPQPPPPQPPRPKTPSPVPKPVSPPPSAQILPATTTTPNTTKPPLPPPPPPPPVQSQPTTSPGPLAMCSISSSLASSIITNPEPPPLHEPNTLEMLQRRAQEVLDSASQGLLAGSLADELAFRKNGGKPGLSPYDGKSGGGRNEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHTAKFPHIKMNPNPVPEHLDKYHPPLLAQLGSPGMPPPPNHGPSPTPPLSAPSAPSGHTPFHPSPFAALYRPPGIPELGLPPPPPPPIPPIQPPPTALQRPPAAGSPSAKQSITPSSMNSFIDQQEAPENLSKSSHEHPLLSESQHLPQRFSQPQQTSLPQQMQQTQHEVKREPSEERYSPKIEPQELIHESPEEIDQDELERYPSPYDGSLDSKYSAEDLLMGDEAEDSLQDQPENLSSKASSGVGGPPRMIIPGLSSFPGPVSPPSSASSGQGDIDPSKDPALYTSLLPRPGSNDNSWESLIEVAKPSETSKLQQLVDNIEHKLTDPNQCVICHRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPPVRVLHQCPVCHKKFTNALVLQQHIRLHTGEPTDLTPEQIQAAEIKDFPHSPVGTPSSFPIGTGLGPFIGPYPGMSPLPPPGLHLGLRPSDLDDRRGDEALEAQDFSKSSDFMDDDISNDSSTGDVGEGECLPPSSIVMPSFSTSLAALENQVRTITTMASELNRSSDTLSVRSSPPMIKVSTGQQNGDDELSVRSPSQPRSASPAASESNSLGALDLTPRPPLLPPPPAPVSSSIQAPVVNTTPTVTPPTTGVFTGLGLLPLTTSVLSATPAFSPIGMAVGPAVRPGNTTCNICFKTFACNSALEIHYRSHTKERPFKCTVCDRGFSTKEGCPGCDQWRIQTQGWRVPAKRRRAPRREHPHPAGYATGDPGNMKQHMLTHKIRDMPSHLFETKAPLPPQVPQVPQIPQLPQLNQIPPGPPPPGPPSDDGCGSTDGGSAPATPNPITTPVAPPQTIVSNCSSLPSSEITPPITTTPPCPKPTDLGVKRSPPEGESVLPVPKRQPGLPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVHMGTHMWSNGASRRGRRMSLDLPPIPMTAKDSEFLQRRPDLFYPYLPAPFLNGMHHKLNEISVIQSVNSNMAGNGLSPQGNKYANLLGFPGGPGNTNGASFGEKPGHSEPPSPLSDQQGSPPPPQQPTQPQQGPPPPPPPPPIAPRPPISLALAAAAAAAAAAGGSPPPSHAHAAAAAAAAAAAVAAADDARSVWDLHYERKQLDEPMDVSQHGAPRGEGLAA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00090633;
- 90% Identity
- -
- 80% Identity
- -