Amar064374.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Anisolabis maritima
Gene Symbol
salm
Assembly
GCA_010014785.1
Location
JAAAKE010005486.1:10565-17276[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 10 0.034 11 8.5 0.4 3 20 31 48 30 50 0.94
2 10 3.9e-06 0.0013 20.9 0.9 1 23 372 394 372 394 0.98
3 10 7.7e-06 0.0026 20.0 2.1 1 23 400 422 400 422 0.98
4 10 0.049 16 8.0 3.8 2 23 733 754 732 754 0.98
5 10 3.4e-08 1.1e-05 27.4 0.6 1 23 760 782 760 782 0.97
6 10 4.7e-05 0.016 17.5 2.6 1 23 792 814 792 814 0.98
7 10 0.002 0.66 12.4 2.1 2 23 1078 1099 1077 1099 0.97
8 10 3.5e-07 0.00011 24.2 1.4 1 23 1105 1127 1105 1127 0.99
9 10 4.7e-06 0.0015 20.7 6.2 3 23 1253 1273 1251 1273 0.96
10 10 8.6e-08 2.9e-05 26.1 0.9 1 23 1279 1301 1279 1301 0.98

Sequence Information

Coding Sequence
ATGTGTGGTGTGTGTTTTGGTGTTGCAGATGAGAGCTGCCCGGGGTCCTGTTCTGATGACGACGGTGGCGGCGGCGGGGGTGGACCACATTGTCCTCATTGCCAAGCGGAGTTTTCCTCTTTGGGGGAACTTTTGGAGCATCGTACGGAATGTCCGGGGGCCTCAGCCTCAGCCGCCTCCGCCGCCGGTACTCCAACTTCCGACAACGAAGACGAGGGTAGCAAACGCCTCCGTCAGCGACAAGACGCCGAGAACAATAACAGTGATGAAATGGAATCTCCTCCTCCAGGGGGTGTAGCtgctgcagcagcagctgcCGCTGCAGCCGCCTTCGGAGTGGTTCCCGTCCCTGGTCATGTCACCCTTGAGGCTTTACAAAATACCAAAGTTGCCGTGGCACAATTTGCAGCCACAACAATGGCGAATAACGCAGATAATGCAGCCGCATTACAAGAACTAGCTGTACTCCAATCTACTTTATTCACATTACAGCACCAACAAGTGATGCAATTGTCTTTAATACAACAATTGCAGCAACAATTACAAATAACACGAAATAAGGATCCATCGCTTtcgccgccgccaccgccaccCCCAGCGCCGGCGAttgcagcagcagcagctacAGTAGCTACTACAGGCCCACCAGTATCTGCTTCTGCGCCTCCACCGCCTCCACCGCCACCCCTGCCACCGCCGCCCCCGCCACCACGTCCAAAAACACCATCGCCAGCACCTAAGCCAATTTCGCCACCCCCAAGTGCGCAAAGTCTCCCAGCTACCCCAACGACTAAAGCACCTCTTCCTCCACCACCCCCACCGCCTCCGACACAGGCTCAGCCAACAACCTCTCCAGGACCACTTGCCATGTGCTCCATTTCGTCCAGTCTGGCCTCGTCCATCATCACAAACCCGGAGCCTCCACCACTTCATGAGCCAAACACTTTGGAAATGTTACAACGTAGAGCTCAAGAAGTATTGGATTCGGCTAGTCAAGGTCTCCTTGCGGGTTCCCTTGCTGACGAACTCGCTTTTCGCAAGAATGGAGGCAAGCCTGGCCTCGCGCCCTACGACGGTAAAAGTGGTGGAGGGCGCAACGAGCCATTCTTTAAACATCGTTGCCGCTACTGTGGCAAAGTGTTCGGCAGCGACTCAGCACTACAAATACATATCAGGTCGCATACAGGTGAGCGTCCGTTTAAATGCAATGTGTGTGGAAGCCGCTTCACAACTAAAGGAAACCTCAAAGTTCATTTCCAAAGACACACGGCCAAATTTCCTCACATTAAAATGAATCCGAACCCAGTGCCGGaacatttagataaatatcATCCACCTCTTTTGGCCCAATTGGGATCCTCTGGTATGCCTCCTCCTCCTAACCATGGTCCATCACCTACACCTCCTCATCCCCCACCTCCTCCTCCAAACAACCATAATCCATTTCACCCAACTTCTTTTGCACCTCTTTATAGACCACCTCCTATGCCAGAACTTGGCcttccaccccctccccctcctccaccACCACCAATCCCTCCTCCGCCAACAGCGTTACAACATCCTCCTGCAGGTGGTAGCCCTGTTGCTAAACACGTTCCGCCCGTctctattaattcttttttggaacAACAAGAGGCGcctgaaaatttatcaaaaacgtcCCAAGAACAACCATTAGTACAATCACAAGAGACACAGCAACCTGAAGTTAAACGAGAACCATCTGAAGAGAGATTAAGTCCCAAAATTGAACCACAAGATGTAATGCACGACTCACCTGAAGAAATGGATCAGGATGAATTGGAACGCTATCCATCTCCTTATGATGGAAGTTTAGACAGTAAATACTCAGCTGAAGATCTTCTAATGGGGGATGAAGCCGAGGACTCATTTCAAGAGCAACCAGAGAATCTTTCAAGTAAAGCCAGCAGCGTAGGAGGAAATTGTATGTCTCGAACAACTTTAACAGGACTTCCCTCATTTCCAGGGCCTGTGTCACCGCCTTCTAGTGCATCTTCAGGTCAAGGCGATATTGATCCTTCAAAAGATCCTGCTTTATATACATCACTCTTACCAAGGCCGGGTTCTAATGATAACTCCTGGGAAAGTCTGATTGAAGTTGCTAAACCAAGTGAAACATCAAAACTACAACAATTAGTCGATAATATTGAACATAAATTAACCGATCCTAACCAATGTGTTATTTGTCATCGAGTTTTATCTTGCAAAAGCGCCCTCCAAATGCATTATCGAACTCACACCGGAGAAAGgccttttaaatgtaaaatttgtggtCGTGCATTTACTACCAAAGGCAATTTAAAAACGCACATGGGGGTGCATCGTGCAAAACCTCCTGTTAGAGTGCTTCACCAATGTCCTGTTTGCcataagaaatttacaaatgcTCTTGTTTTACAACAACATATTCGGTTACATACAGGAGAGCCAACAGATTTAACACCAGAGCAAATACAAGCTGCCGAGATAAAAGATTTCCCCCCATCACCTGCCGGAACACCTAGTGCATTTCCTTTAGGTACGGGGTTAGGTCCTTTCATTGGCCCTTATCCTGGAATGTCCCCCCTACCTCCGCCCGGGCTCCACCTTGGACTGCGTCCTTCCGATATCGATGACCGTCGCGAGGAACCTCTTGAGGCTCAAGACTTTTCTAAATCTTCCGATTTTATGGACGATGAGATGTCAAACGAAAGTAGCGCAGGGGGTGGCGGAGAAGGTGAGGGTCTTCCACCTACTATAATGCCATCATTTTCAACATCGTTAGCTGCTTTAGAAAATCAAGTACGAACTATTACAACAATGGCTTCCGAATTAAATCGTTCCTCTGATACGTTAAGTATCCGTTCATCACCGCCAATCATTAAGGTTTCTACTGGATTGATCTCTCAACAAAATGGCGATGATGAATCCGTGAGGTCACCATCACAACCCCGATCAACGAGTCCCGCTGCTTCCGAATCAAATTCATTAGGTGCTCTGGATTTGACGCCTCGTCCGCCACTTTTGCCACCGCCCCTAGCGCCTGCATCTACAACTGTCACCACTGCAGCAGCATCAGTAGCCACGTCTCCTGCTGTCACCACCCCACCTCCAGGTGTCTTCTCCGGACTTGGGTTGCTGCCTTTGACGTCTTCGGTGCTCTCCGCATCGCCTGCGTTCAGCCCGCTCGGCATGGCCGTGGGACCGGCAGTTCGACCCGGAAATACAACTTGTAACATTTGCTTCAAAACGTTTGCTTGTAATTCGGCCCTTGAAATTCATTATCGGAGCCACACCAAAGAGAGACCCTTCAAATGCACTGTCTGCGATCGAGGATTCTCTACCAAAGGCAATATGAAGCAGCACATGCTCACGCACAAGATCCGGGACATGCCCTCCCATCTCTTCGAGAGCAAACCCACTCAAGTGGCATCACAGGCacctccaccaccaccaccgcctCCACCTCCGGGTCCAGGTCCACTTCCACTTCCAGGACCTCCTAGTGATGATGGGTGTGGATCCATAGACGGCATGTCAGCGCCAGCGACTCCAACCTCAACTTCCTCAGCACCATTAGTAACCACAACCACTGTGACGAACTGTAACGCCCAGCCGAAGACCCCTGAAGCTCCTCTGGCTGCCACACCTCCGGCGCAAAAGCCAGCCGACCTGGGAGTGAAGCGTTCTCCTCCTGAAGGCGAAGCAGTTTTACCGATCCCGAAAAGACAACCAGGCTTGCCCAAACATTTGTGCCATGTTTGCCATAAGAACTTCTCGTCTTCGTCAGCGCTCCAGATCCATATGCGGACGCACACAGGAGATAAGCCCTTTCGATGCACCATCTGCCAAAAAGCGTTCACCACAAAGGGCAACCTCAAGGTGCACATGGGCACGCATATGTGGAGCAACGGAGCCTCTCGGCGAGGGCGACGGATGTCTCTCGACTTACCTCCCATCCCCATGACCGCCAAGGACTCGGAGTTTCTACAAAGGAGACCCGATCTCTTTTACCCGTACCTGCCGGCCCCTTTCCTTAACGGCATGCATCATAAgcTGAACGAGATTTCTGTGATTCAGTCAGTGAATAGCAACATGGCCGGTAATGGACTTAGTCCACAAGGGAACAAGTACGCCAATTTATTAGGCTTTCCTGGAAACGGTGGGACTGGCGGTGGCGGTACCACAACGGGTGTCAATGGACCTACATTTGGTGAAAAACCCGGACGATCGGAACCTCCTTCGCCACTCTCTGATCAACAAGGGTCACCCCCTCCTATGCAGCCACCACAACCTCATCAGTCTCAACAACCTCCACCCCCGCCGCCATCCACTCTCGCATCACGACCACCGATCTCATTGGCTTTGGCTGCAGCGGCAGCGGCTGCAGCAGCTGCCGGAGGATCCCCACCACCCAATCATGCAGCTGCGGCTGCAGCGGCAGCAGCAGCGGCGGCTGCAGTCGCGGCGGCGGACGATGCGCGCAGTGTTTGGGACTTGCATTATGAGCGAAAACAATTAGATGAACCTATGGACGTGTCACAACACGGAGCCCCGAGGGGCGAAGGCCTTGCTGCCTAG
Protein Sequence
MCGVCFGVADESCPGSCSDDDGGGGGGGPHCPHCQAEFSSLGELLEHRTECPGASASAASAAGTPTSDNEDEGSKRLRQRQDAENNNSDEMESPPPGGVAAAAAAAAAAAFGVVPVPGHVTLEALQNTKVAVAQFAATTMANNADNAAALQELAVLQSTLFTLQHQQVMQLSLIQQLQQQLQITRNKDPSLSPPPPPPPAPAIAAAAATVATTGPPVSASAPPPPPPPPLPPPPPPPRPKTPSPAPKPISPPPSAQSLPATPTTKAPLPPPPPPPPTQAQPTTSPGPLAMCSISSSLASSIITNPEPPPLHEPNTLEMLQRRAQEVLDSASQGLLAGSLADELAFRKNGGKPGLAPYDGKSGGGRNEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHTAKFPHIKMNPNPVPEHLDKYHPPLLAQLGSSGMPPPPNHGPSPTPPHPPPPPPNNHNPFHPTSFAPLYRPPPMPELGLPPPPPPPPPPIPPPPTALQHPPAGGSPVAKHVPPVSINSFLEQQEAPENLSKTSQEQPLVQSQETQQPEVKREPSEERLSPKIEPQDVMHDSPEEMDQDELERYPSPYDGSLDSKYSAEDLLMGDEAEDSFQEQPENLSSKASSVGGNCMSRTTLTGLPSFPGPVSPPSSASSGQGDIDPSKDPALYTSLLPRPGSNDNSWESLIEVAKPSETSKLQQLVDNIEHKLTDPNQCVICHRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPPVRVLHQCPVCHKKFTNALVLQQHIRLHTGEPTDLTPEQIQAAEIKDFPPSPAGTPSAFPLGTGLGPFIGPYPGMSPLPPPGLHLGLRPSDIDDRREEPLEAQDFSKSSDFMDDEMSNESSAGGGGEGEGLPPTIMPSFSTSLAALENQVRTITTMASELNRSSDTLSIRSSPPIIKVSTGLISQQNGDDESVRSPSQPRSTSPAASESNSLGALDLTPRPPLLPPPLAPASTTVTTAAASVATSPAVTTPPPGVFSGLGLLPLTSSVLSASPAFSPLGMAVGPAVRPGNTTCNICFKTFACNSALEIHYRSHTKERPFKCTVCDRGFSTKGNMKQHMLTHKIRDMPSHLFESKPTQVASQAPPPPPPPPPPGPGPLPLPGPPSDDGCGSIDGMSAPATPTSTSSAPLVTTTTVTNCNAQPKTPEAPLAATPPAQKPADLGVKRSPPEGEAVLPIPKRQPGLPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVHMGTHMWSNGASRRGRRMSLDLPPIPMTAKDSEFLQRRPDLFYPYLPAPFLNGMHHKLNEISVIQSVNSNMAGNGLSPQGNKYANLLGFPGNGGTGGGGTTTGVNGPTFGEKPGRSEPPSPLSDQQGSPPPMQPPQPHQSQQPPPPPPSTLASRPPISLALAAAAAAAAAAGGSPPPNHAAAAAAAAAAAAAVAAADDARSVWDLHYERKQLDEPMDVSQHGAPRGEGLAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00850039;
90% Identity
-
80% Identity
-